Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51689 件

5KR3
DownloadVisualize
BU of 5kr3 by Molmil
Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins for New Chemistries
分子名称: 4-aminobutyrate transaminase, PYRIDOXAL-5'-PHOSPHATE
著者Wilding, M, Newman, J, Peat, T.S, Scott, C.
登録日2016-07-06
公開日2017-07-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Reverse engineering: transaminase biocatalyst development using ancestral sequence reconstruction
Green Chemistry, 19, 2017
5HLZ
DownloadVisualize
BU of 5hlz by Molmil
Structure of Pro-Activin A Complex at 2.85 A resolution
分子名称: Inhibin beta A chain
著者Wang, X, Fischer, G, Hyvonen, M.
登録日2016-01-15
公開日2016-07-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.851 Å)
主引用文献Structure and activation of pro-activin A.
Nat Commun, 7, 2016
1IEW
DownloadVisualize
BU of 1iew by Molmil
Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme Exo1 in complex with 2-deoxy-2-fluoro-alpha-D-glucoside
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-deoxy-2-fluoro-alpha-D-glucopyranose, ...
著者Hrmova, M, DeGori, R, Fincher, G.B, Smith, B.J, Varghese, J.N.
登録日2001-04-11
公開日2001-11-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Catalytic mechanisms and reaction intermediates along the hydrolytic pathway of a plant beta-D-glucan glucohydrolase.
Structure, 9, 2001
1CI5
DownloadVisualize
BU of 1ci5 by Molmil
GLYCAN-FREE MUTANT ADHESION DOMAIN OF HUMAN CD58 (LFA-3)
分子名称: PROTEIN (LYMPHOCYTE FUNCTION-ASSOCIATED ANTIGEN 3(CD58))
著者Sun, Z.Y.J, Dotsch, V, Kim, M, Li, J, Reinherz, E.L, Wagner, G.
登録日1999-04-07
公開日1999-06-22
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Functional glycan-free adhesion domain of human cell surface receptor CD58: design, production and NMR studies.
EMBO J., 18, 1999
5KU0
DownloadVisualize
BU of 5ku0 by Molmil
expanded poliovirus in complex with VHH 17B
分子名称: VHH 17B, VP1, VP2, ...
著者Strauss, M, Schotte, L, Filman, D.J, Hogle, J.M.
登録日2016-07-12
公開日2016-11-02
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-electron Microscopy Structures of Expanded Poliovirus with VHHs Sample the Conformational Repertoire of the Expanded State.
J. Virol., 91, 2017
2Z7H
DownloadVisualize
BU of 2z7h by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with inhibitor BPH-210
分子名称: Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION, {1-HYDROXY-3-[METHYL(4-PHENYLBUTYL)AMINO]PROPANE-1,1-DIYL}BIS(PHOSPHONIC ACID)
著者Cao, R, Chen, C.K.-M, Guo, R.-T, Hudock, M, Wang, A.H.-J, Oldfield, E.
登録日2007-08-23
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structures of a potent phenylalkyl bisphosphonate inhibitor bound to farnesyl and geranylgeranyl diphosphate synthases.
Proteins, 73, 2008
1IQT
DownloadVisualize
BU of 1iqt by Molmil
Solution structure of the C-terminal RNA-binding domain of heterogeneous nuclear ribonucleoprotein D0 (AUF1)
分子名称: heterogeneous nuclear ribonucleoprotein D0
著者Katahira, M, Miyanoiri, Y, Enokizono, Y, Matsuda, G, Nagata, T, Ishikawa, F, Uesugi, S.
登録日2001-08-01
公開日2002-08-07
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure of the C-terminal RNA-binding domain of hnRNP D0 (AUF1), its interactions with RNA and DNA, and change in backbone dynamics upon complex formation with DNA.
J.Mol.Biol., 311, 2001
5HUO
DownloadVisualize
BU of 5huo by Molmil
Crystal Structure of NadC Deletion Mutant in C2221 Space Group
分子名称: Nicotinate-nucleotide diphosphorylase (Carboxylating), SULFATE ION
著者Booth, W.T, Chruszcz, M.
登録日2016-01-27
公開日2017-01-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Streptococcus pyogenes quinolinate-salvage pathway-structural and functional studies of quinolinate phosphoribosyl transferase and NH3 -dependent NAD(+) synthetase.
FEBS J., 284, 2017
5L1D
DownloadVisualize
BU of 5l1d by Molmil
Structure of rabbit RyR2 in complex with FKBP12.6 in a closed state (conformation C1)
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine Receptor
著者Dhindwal, S, Lobo, J.J, Samso, M.
登録日2016-07-29
公開日2017-05-24
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (11 Å)
主引用文献A cryo-EM-based model of phosphorylation- and FKBP12.6-mediated allosterism of the cardiac ryanodine receptor.
Sci.Signal., 10, 2017
1CIB
DownloadVisualize
BU of 1cib by Molmil
STRUCTURE OF ADENYLOSUCCINATE SYNTHETASE FROM E. COLI COMPLEXED WITH GDP, IMP, HADACIDIN, AND NO3
分子名称: ADENYLOSUCCINATE SYNTHETASE, GUANOSINE-5'-DIPHOSPHATE, HADACIDIN, ...
著者Hou, Z, Cashel, M, Fromm, H.J, Honzatko, R.B.
登録日1999-03-31
公開日2000-04-05
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Effectors of the stringent response target the active site of Escherichia coli adenylosuccinate synthetase.
J.Biol.Chem., 274, 1999
5L5H
DownloadVisualize
BU of 5l5h by Molmil
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with PR-924
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
著者Groll, M, Huber, E.M.
登録日2016-05-28
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
5L1C
DownloadVisualize
BU of 5l1c by Molmil
Heteronuclear Solution Structure of Chlorotoxin
分子名称: Chlorotoxin
著者Mobli, M, Braga, C.B, Sharma, G.
登録日2016-07-28
公開日2017-08-09
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of Chlorotoxin, a glioma specific scorpion toxin
To Be Published
5ULU
DownloadVisualize
BU of 5ulu by Molmil
Crystal Structure of Mouse Cadherin-23 EC19-21 (S2087P) with non-syndromic deafness (DFNB12) associated mutation D2148N
分子名称: CALCIUM ION, Cadherin-23
著者Jaiganesh, A, Sotomayor, M.
登録日2017-01-25
公開日2018-01-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 26, 2018
5HY0
DownloadVisualize
BU of 5hy0 by Molmil
orotic acid hydrolase
分子名称: GLYCEROL, Ring-opening amidohydrolase
著者Peat, T.S, Balotra, S, Wilding, M, Newman, J, Scott, C.
登録日2016-02-01
公開日2017-02-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes.
Appl. Environ. Microbiol., 83, 2017
5HYI
DownloadVisualize
BU of 5hyi by Molmil
Glycosylated, disulfide-linked Hole-Hole Fc fragment
分子名称: Ig gamma-1 chain C region, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kuglstatter, A, Stihle, M, Benz, J.
登録日2016-02-01
公開日2017-02-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural differences between glycosylated, disulfide-linked heterodimeric Knob-into-Hole Fc fragment and its homodimeric Knob-Knob and Hole-Hole side products.
Protein Eng. Des. Sel., 30, 2017
5L5V
DownloadVisualize
BU of 5l5v by Molmil
'Yeast 20S proteasome with human beta5i (1-138; V31M) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 18
分子名称: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
著者Groll, M, Huber, E.M.
登録日2016-05-28
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
5L6B
DownloadVisualize
BU of 5l6b by Molmil
Yeast 20S proteasome with mouse beta5i (1-138) and mouse beta6 (97-111; 118-133) in complex with ONX 0914
分子名称: 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Groll, M, Huber, E.M.
登録日2016-05-28
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
3BKJ
DownloadVisualize
BU of 3bkj by Molmil
Crystal structure of Fab wo2 bound to the n terminal domain of amyloid beta peptide (1-16)
分子名称: Amyloid Beta Peptide, WO2 IgG2a Fab fragment Heavy Chain, WO2 IgG2a Fab fragment Light Chain Kappa
著者Miles, L.A, Wun, K.S, Crespi, G.A, Fodero-Tavoletti, M, Galatis, D, Bageley, C.J, Beyreuther, K, Masters, C.L, Cappai, R, McKinstry, W.J, Barnham, K.J, Parker, M.W.
登録日2007-12-06
公開日2008-04-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Amyloid-beta-anti-amyloid-beta complex structure reveals an extended conformation in the immunodominant B-cell epitope.
J.Mol.Biol., 377, 2008
5VBU
DownloadVisualize
BU of 5vbu by Molmil
Crystal Structure of Human Cytochrome P450 21A2 Hydroxyprogesterone Complex
分子名称: (9beta)-17-hydroxypregn-4-ene-3,20-dione, Cytochrome P450 21-hydroxylase, PROTOPORPHYRIN IX CONTAINING FE
著者Pallan, P.S, Egli, M.
登録日2017-03-30
公開日2017-05-31
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Functional analysis of human cytochrome P450 21A2 variants involved in congenital adrenal hyperplasia.
J. Biol. Chem., 292, 2017
1IIJ
DownloadVisualize
BU of 1iij by Molmil
SOLUTION STRUCTURE OF THE NEU/ERBB-2 MEMBRANE SPANNING SEGMENT
分子名称: ERBB-2 RECEPTOR PROTEIN-TYROSINE KINASE
著者Goetz, M, Carlotti, C, Bontems, F, Dufourc, E.J.
登録日2001-04-23
公開日2001-06-27
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Evidence for an alpha-helix --> pi-bulge helicity modulation for the neu/erbB-2 membrane-spanning segment. A 1H NMR and circular dichroism study.
Biochemistry, 40, 2001
1CPM
DownloadVisualize
BU of 1cpm by Molmil
NATIVE-LIKE IN VIVO FOLDING OF A CIRCULARLY PERMUTED JELLYROLL PROTEIN SHOWN BY CRYSTAL STRUCTURE ANALYSIS
分子名称: CALCIUM ION, CIRCULARLY PERMUTED
著者Hahn, M, Heinemann, U.
登録日1994-03-11
公開日1994-06-22
最終更新日2019-08-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Native-like in vivo folding of a circularly permuted jellyroll protein shown by crystal structure analysis.
Proc.Natl.Acad.Sci.USA, 91, 1994
5VPH
DownloadVisualize
BU of 5vph by Molmil
CRYSTAL STRUCTURE OF DER P 1 COMPLEXED WITH FAB 4C1
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Der p 1 allergen, ...
著者Chruszcz, M, Vailes, L.D, Chapman, M.D, Pomes, A, Minor, W.
登録日2017-05-05
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular Determinants For Antibody Binding On Group 1 House Dust Mite Allergens.
J.Biol.Chem., 287, 2012
1CPY
DownloadVisualize
BU of 1cpy by Molmil
SITE-DIRECTED MUTAGENESIS ON (SERINE) CARBOXYPEPTIDASE Y FROM YEAST. THE SIGNIFICANCE OF THR 60 AND MET 398 IN HYDROLYSIS AND AMINOLYSIS REACTIONS
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SERINE CARBOXYPEPTIDASE
著者Sorensen, S.B, Raaschou-Nielsen, M, Mortensen, U, Remington, S.J, Breddam, K.
登録日1995-03-24
公開日1995-09-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Site-Directed Mutagenesis on (Serine) Carboxypeptidase Y from Yeast. The Significance of Thr 60 and met 398 in Hydrolysis and Aminolysis Reactions
J.Am.Chem.Soc., 117, 1995
2PFS
DownloadVisualize
BU of 2pfs by Molmil
Crystal structure of universal stress protein from Nitrosomonas europaea
分子名称: CHLORIDE ION, Universal stress protein
著者Chruszcz, M, Evdokimova, E, Cymborowski, M, Kagan, O, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2007-04-05
公開日2007-05-08
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and functional insight into the universal stress protein family.
Evol Appl, 6, 2013
1CSO
DownloadVisualize
BU of 1cso by Molmil
CRYSTAL STRUCTURE OF THE OMTKY3 P1 VARIANT OMTKY3-ILE18I IN COMPLEX WITH SGPB
分子名称: OVOMUCOID INHIBITOR, PROTEINASE B
著者Bateman, K.S, Anderson, S, Lu, W, Qasim, M.A, Laskowski Jr, M, James, M.N.G.
登録日1999-08-18
公開日2000-01-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Deleterious effects of beta-branched residues in the S1 specificity pocket of Streptomyces griseus proteinase B (SGPB): crystal structures of the turkey ovomucoid third domain variants Ile18I, Val18I, Thr18I, and Ser18I in complex with SGPB.
Protein Sci., 9, 2000

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon