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PDB: 51689 件

7PXD
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Substrate-engaged mycobacterial Proteasome-associated ATPase in complex with open-gate 20S CP - composite map (state B)
分子名称: AAA ATPase forming ring-shaped complexes, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Jomaa, A, Kavalchuk, M, Weber-Ban, E.
登録日2021-10-08
公開日2022-01-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of prokaryotic ubiquitin-like protein engagement and translocation by the mycobacterial Mpa-proteasome complex.
Nat Commun, 13, 2022
7PT2
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Actinobacterial 2-hydroxyacyl-CoA lyase (AcHACL) mutant E493Q structure in complex with substrate 2-HIB-CoA and inactive cofactor 3-deaza-ThDP
分子名称: 2-hydroxyacyl-CoA lyase, 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, MAGNESIUM ION, ...
著者Zahn, M, Rohwerder, T.
登録日2021-09-25
公開日2022-02-02
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.762 Å)
主引用文献Mechanistic details of the actinobacterial lyase-catalyzed degradation reaction of 2-hydroxyisobutyryl-CoA.
J.Biol.Chem., 298, 2022
1A0F
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CRYSTAL STRUCTURE OF GLUTATHIONE S-TRANSFERASE FROM ESCHERICHIA COLI COMPLEXED WITH GLUTATHIONESULFONIC ACID
分子名称: GLUTATHIONE S-TRANSFERASE, GLUTATHIONE SULFONIC ACID
著者Nishida, M, Harada, S, Noguchi, S, Inoue, H, Takahashi, K, Satow, Y.
登録日1997-11-29
公開日1999-01-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Three-dimensional structure of Escherichia coli glutathione S-transferase complexed with glutathione sulfonate: catalytic roles of Cys10 and His106.
J.Mol.Biol., 281, 1998
7PT1
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BU of 7pt1 by Molmil
Actinobacterial 2-hydroxyacyl-CoA lyase (AcHACL) structure in complex with substrate 2-HIB-CoA and inactive cofactor 3-deaza-ThDP
分子名称: 2-hydroxyacyl-CoA lyase, 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, MAGNESIUM ION, ...
著者Zahn, M, Rohwerder, T.
登録日2021-09-25
公開日2022-02-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.553 Å)
主引用文献Mechanistic details of the actinobacterial lyase-catalyzed degradation reaction of 2-hydroxyisobutyryl-CoA.
J.Biol.Chem., 298, 2022
8BMV
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BU of 8bmv by Molmil
Ligand binding domain of the P. Putida receptor McpH in complex with Uric acid
分子名称: Methyl-accepting chemotaxis protein McpH, URIC ACID
著者Gavira, J.A, Krell, T, Fernandez, M, Martinez-Rodriguez, S.
登録日2022-11-11
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Ubiquitous purine sensor modulates diverse signal transduction pathways in bacteria.
Nat Commun, 15, 2024
5HY9
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Glycosylated, disulfide-linked Knob-into-Hole Fc fragment
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kuglstatter, A, Stihle, M, Benz, J.
登録日2016-02-01
公開日2017-02-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural differences between glycosylated, disulfide-linked heterodimeric Knob-into-Hole Fc fragment and its homodimeric Knob-Knob and Hole-Hole side products.
Protein Eng. Des. Sel., 30, 2017
7PT3
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BU of 7pt3 by Molmil
Actinobacterial 2-hydroxyacyl-CoA lyase (AcHACL) mutant E493A structure in complex with substrate 2-HIB-CoA and inactive cofactor 3-deaza-ThDP
分子名称: 2-hydroxyacyl-CoA lyase, 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, MAGNESIUM ION, ...
著者Zahn, M, Rohwerder, T.
登録日2021-09-25
公開日2022-02-02
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.625 Å)
主引用文献Mechanistic details of the actinobacterial lyase-catalyzed degradation reaction of 2-hydroxyisobutyryl-CoA.
J.Biol.Chem., 298, 2022
1IWQ
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Crystal Structure of MARCKS calmodulin binding domain peptide complexed with Ca2+/Calmodulin
分子名称: CALCIUM ION, CALMODULIN, MARCKS
著者Yamauchi, E, Nakatsu, T, Matsubara, M, Kato, H, Taniguchi, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-05-31
公開日2003-03-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a MARCKS peptide containing the calmodulin-binding domain in complex with Ca(2+)-calmodulin
NAT.STRUCT.BIOL., 10, 2003
5HN3
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Crystal structure of beta-decarboxylating dehydrogenase (TK0280) from Thermococcus kodakarensis (apo form)
分子名称: Homoisocitrate dehydrogenase, IMIDAZOLE, SODIUM ION
著者Shimizu, T, Tomita, T, Nishiyama, M.
登録日2016-01-18
公開日2016-12-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and function of an ancestral-type beta-decarboxylating dehydrogenase from Thermococcus kodakarensis
Biochem. J., 474, 2017
5EG9
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BU of 5eg9 by Molmil
The cap binding site of influenza virus protein PB2 as a drug target
分子名称: Polymerase basic protein 2
著者Severin, C, Rocha de Moura, T, Liu, Y, Li, K, Zheng, X, Luo, M.
登録日2015-10-26
公開日2016-02-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The cap-binding site of influenza virus protein PB2 as a drug target.
Acta Crystallogr D Struct Biol, 72, 2016
8CDZ
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BU of 8cdz by Molmil
human carbonic anhydrase I complexed with 4-(3-butylureido)benzenesulfonamide
分子名称: 1-butyl-3-(4-sulfamoylphenyl)urea, Carbonic anhydrase 1, DIMETHYL SULFOXIDE, ...
著者Angeli, A, Ferraroni, M.
登録日2023-02-01
公開日2024-02-21
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Ureidobenzenesulfonamides as Selective Carbonic Anhydrase I, IX, and XII Inhibitors.
Molecules, 28, 2023
5HZJ
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BU of 5hzj by Molmil
Crystal structure of photoinhibitable Intersectin1 containing wildtype LOV2 domain
分子名称: FLAVIN MONONUCLEOTIDE, Intersectin-1,NPH1-1,Intersectin-1
著者Tarnawski, M, Dagliyan, O, Chu, P.H, Shirvanyants, D, Dokholyan, N.V, Hahn, K.M, Schlichting, I.
登録日2016-02-02
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Engineering extrinsic disorder to control protein activity in living cells.
Science, 354, 2016
6OBS
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BU of 6obs by Molmil
PP1 Y134K
分子名称: GLYCEROL, MANGANESE (II) ION, PHOSPHATE ION, ...
著者Choy, M.S, Moon, T.M, Bray, J.A, Archuleta, T.L, Shi, W, Peti, W, Page, R.
登録日2019-03-21
公開日2019-09-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献SDS22 selectively recognizes and traps metal-deficient inactive PP1.
Proc.Natl.Acad.Sci.USA, 116, 2019
8CF9
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Crystal structure of the human PXR ligand-binding domain in complex with sclareol
分子名称: GLYCEROL, Nuclear receptor subfamily 1 group I member 2, sclareol
著者Carivenc, C, Derosa, Q, Grimaldi, M, Boulahtouf, A, Balaguer, P, Bourguet, W.
登録日2023-02-03
公開日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the human PXR ligand-binding domain in complex with sclareol
To Be Published
7PT4
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BU of 7pt4 by Molmil
Actinobacterial 2-hydroxyacyl-CoA lyase (AcHACL) structure in complex with a covalently bound reaction intermediate as well as products formyl-CoA and acetone
分子名称: 2-hydroxyacyl-CoA lyase, 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1R,11R,15S,17R)-19-[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]-1,11,15,17-TETRAHYDROXY-12,12-DIMETHYL-15,17-DIOXIDO-6,10-DIOXO-14,16,18-TRIOXA-2-THIA-5,9-DIAZA-15,17-DIPHOSPHANONADEC-1-YL}-5-(2-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM, ACETONE, ...
著者Zahn, M, Rohwerder, T.
登録日2021-09-25
公開日2022-02-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Mechanistic details of the actinobacterial lyase-catalyzed degradation reaction of 2-hydroxyisobutyryl-CoA.
J.Biol.Chem., 298, 2022
5EHH
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BU of 5ehh by Molmil
Structure of human DPP3 in complex with endomorphin-2.
分子名称: Dipeptidyl peptidase 3, Endomorphin-2, MAGNESIUM ION, ...
著者Kumar, P, Reithofer, V, Reisinger, M, Pavkov-Keller, T, Wallner, S, Macheroux, P, Gruber, K.
登録日2015-10-28
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition.
Sci Rep, 6, 2016
5HOC
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BU of 5hoc by Molmil
p73 homo-tetramerization domain mutant II
分子名称: Tumor protein p73
著者Coutandin, D, Krojer, T, Salah, E, Mathea, S, Sumyk, M, Knapp, S, Dotsch, V.
登録日2016-01-19
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.36007786 Å)
主引用文献Mechanism of TAp73 inhibition by Delta Np63 and structural basis of p63/p73 hetero-tetramerization.
Cell Death Differ., 23, 2016
5EHB
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BU of 5ehb by Molmil
A de novo designed hexameric coiled-coil peptide with iodotyrosine
分子名称: pHiosYI
著者Lizatovic, R, Aurelius, O, Stenstrom, O, Drakenberg, T, Akke, M, Logan, D.T, Andre, I.
登録日2015-10-28
公開日2016-06-15
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献A De Novo Designed Coiled-Coil Peptide with a Reversible pH-Induced Oligomerization Switch.
Structure, 24, 2016
1IDP
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BU of 1idp by Molmil
Crystal structure of scytalone dehydratase F162A mutant in the unligated state
分子名称: SCYTALONE DEHYDRATASE
著者Nakasako, M, Motoyama, T, Yamaguchi, I.
登録日2001-04-04
公開日2003-04-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystallization of scytalone dehydratase F162A mutant in the unligated state and a preliminary X-ray diffraction study at 37 K
Acta Crystallogr.,Sect.D, 58, 2002
5EHO
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Rapid Discovery of Pyrido[3,4-d]pyrimidine Inhibitors of Monopolar Spindle kinase 1 (MPS1) Using a Structure-Based Hydridization Approach
分子名称: DIMETHYL SULFOXIDE, Dual specificity protein kinase TTK, ~{N}8-cyclohexyl-~{N}2-[2-methoxy-4-(1-methylpyrazol-4-yl)phenyl]pyrido[3,4-d]pyrimidine-2,8-diamine
著者Innocenti, P, Woodward, H.L, Solanki, S, Naud, N, Westwood, I.M, Cronin, N, Hayes, A, Roberts, J, Henley, A.T, Baker, R, Faisal, A, Mak, G, Box, G, Valenti, M, De Haven Brandon, A, O'Fee, L, Saville, J, Schmitt, J, Burke, R, van Montfort, R.L.M, Raymaud, F.I, Eccles, S.A, Linardopoulos, S, Blagg, J, Hoelder, S.
登録日2015-10-28
公開日2016-11-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Rapid Discovery of Pyrido[3,4-d]pyrimidine Inhibitors of Monopolar Spindle kinase 1 (MPS1) Using a Structure-Based Hydridization Approach
To Be Published
2LVU
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BU of 2lvu by Molmil
Solution structure of Miz-1 zinc finger 10
分子名称: ZINC ION, Zinc finger and BTB domain-containing protein 17
著者Bedard, M, Maltais, L, Beaulieu, M, Bernard, D, Lavigne, P.
登録日2012-07-11
公開日2012-07-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR structure note: solution structure of human Miz-1 zinc fingers 8 to 10.
J.Biomol.Nmr, 54, 2012
8CH8
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BU of 8ch8 by Molmil
Crystal structure of the human PXR ligand-binding domain in complex with liranaftate
分子名称: Nuclear receptor subfamily 1 group I member 2, ~{O}-(5,6,7,8-tetrahydronaphthalen-2-yl) ~{N}-(6-methoxypyridin-2-yl)-~{N}-methyl-carbamothioate
著者Carivenc, C, Derosa, Q, Grimaldi, M, Boulahtouf, A, Balaguer, P, Bourguet, W.
登録日2023-02-07
公開日2024-02-21
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of the human PXR ligand-binding domain in complex with liranaftate
To Be Published
8CHY
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BU of 8chy by Molmil
Crystal structure of an 8-repeat consensus TPR superhelix with Zinc.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Liutkus, M, Rojas, A.L, Cortajarena, A.L.
登録日2023-02-08
公開日2024-02-21
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Diverse crystalline protein scaffolds through metal-dependent polymorphism.
Protein Sci., 33, 2024
1A90
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RECOMBINANT MUTANT CHICKEN EGG WHITE CYSTATIN, NMR, 31 STRUCTURES
分子名称: CYSTATIN
著者Dieckmann, T, Mitschang, L, Hofmann, M, Kos, J, Turk, V, Auerswald, E.A, Jaenicke, R, Oschkinat, H.
登録日1998-04-14
公開日1998-06-17
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献The structures of native phosphorylated chicken cystatin and of a recombinant unphosphorylated variant in solution.
J.Mol.Biol., 234, 1993
8CI8
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BU of 8ci8 by Molmil
Cryo-EM structure of the Nup98(298-327) fibril
分子名称: Nuclear pore complex protein Nup98
著者Ibanez de Opakua, A, Cima-Omori, S, Dienemann, C, Zweckstetter, M.
登録日2023-02-09
公開日2024-02-21
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Impact of distinct FG nucleoporin repeats on Nup98 self-association.
Nat Commun, 15, 2024

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件を2024-09-04に公開中

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