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PDB: 51964 results

3QTB
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Structure of the universal stress protein from Archaeoglobus fulgidus in complex with dAMP
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, ACETATE ION, Uncharacterized protein
Authors:Tkaczuk, K.L, Shumilin, I.A, Chruszcz, M, Cymborowski, M, Xu, X, Di Leo, R, Savchenko, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-02-22
Release date:2011-03-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional insight into the universal stress protein family.
Evol Appl, 6, 2013
1UH0
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BU of 1uh0 by Molmil
Crystal structure of jacalin- Me-alpha-GalNAc complex
Descriptor: Agglutinin alpha chain, Agglutinin beta-3 chain, methyl 2-acetamido-2-deoxy-alpha-D-galactopyranoside
Authors:Jeyaprakash, A.A, Katiyar, S, Swaminathan, C.P, Sekar, K, Surolia, A, Vijayan, M.
Deposit date:2003-06-23
Release date:2003-09-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis of the Carbohydrate Specificities of Jacalin: An X-ray and Modeling Study
J.MOL.BIOL., 332, 2003
5OJN
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BU of 5ojn by Molmil
Sirtuin 4 from Xenopus tropicalis in complex with thioacetyl-ADP-ribose
Descriptor: NAD-dependent protein deacylase, ZINC ION, thioacetyl-ADP-ribose
Authors:Pannek, M, Steegborn, C.
Deposit date:2017-07-22
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the mitochondrial deacylase Sirtuin 4 reveal isoform-specific acyl recognition and regulation features.
Nat Commun, 8, 2017
6CGK
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BU of 6cgk by Molmil
Structure of the HAD domain of effector protein Lem4 (lpg1101) from Legionella pneumophila (inactive mutant)with phosphate bound in the active site
Descriptor: GLYCEROL, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Beyrakhova, K.A, Xu, C, Cygler, M.
Deposit date:2018-02-20
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.668 Å)
Cite:Legionella pneumophilaeffector Lem4 is a membrane-associated protein tyrosine phosphatase.
J. Biol. Chem., 293, 2018
6Q57
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BU of 6q57 by Molmil
X-ray crystal structure of the tetrahydrofolate riboswitch aptamer bound to 5-deazatetrahydropterin
Descriptor: 5-deazatetrahydropterin, MAGNESIUM ION, tetrahydrofolate riboswitch aptamer
Authors:Dunstan, M.S.
Deposit date:2018-12-07
Release date:2019-12-18
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Tetrahydrofolate Riboswitches Provide Distinct Genetic Outputs to Synthetic and Natural Signals.
To Be Published
7N9Q
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BU of 7n9q by Molmil
State 3 of TcdB and FZD2 at pH5
Descriptor: Toxin B
Authors:Jiang, M, Zhang, J.
Deposit date:2021-06-18
Release date:2022-03-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
7NFZ
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BU of 7nfz by Molmil
Crystal structure of haloalkane dehalogenase LinB57 mutant (H272F) from Sphingobium japonicum UT26
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, ...
Authors:Marek, M.
Deposit date:2021-02-08
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Crystal structure of haloalkane dehalogenase LinB57 mutant (H272F) from Sphingobium japonicum UT26
To Be Published
7N9S
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BU of 7n9s by Molmil
TcdB and frizzled-2 CRD complex
Descriptor: Frizzled-2, Toxin B
Authors:Jiang, M, Zhang, J.
Deposit date:2021-06-18
Release date:2022-03-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
7N9R
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BU of 7n9r by Molmil
state 4 of TcdB and FZD2 at pH5
Descriptor: Toxin B
Authors:Jiang, M, Zhang, J.
Deposit date:2021-06-18
Release date:2022-03-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
5V7Z
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BU of 5v7z by Molmil
SSNMR Structure of the Human RIP1/RIP3 Necrosome
Descriptor: PRO-LEU-VAL-ASN-ILE-TYR-ASN-CYS-SER-GLY-VAL-GLN-VAL-GLY-ASP, THR-ILE-TYR-ASN-SER-THR-GLY-ILE-GLN-ILE-GLY-ALA-TYR-ASN-TYR-MET-GLU-ILE
Authors:Mompean, M, Li, W, Li, J, Laage, S, Siemer, A.B, Wu, H, McDermott, A.E.
Deposit date:2017-03-21
Release date:2018-03-28
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:The Structure of the Necrosome RIPK1-RIPK3 Core, a Human Hetero-Amyloid Signaling Complex.
Cell, 173, 2018
3USH
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BU of 3ush by Molmil
Crystal Structure of the Q2S0R5 protein from Salinibacter ruber, Northeast Structural Genomics Consortium Target SrR207
Descriptor: BROMIDE ION, Uncharacterized protein
Authors:Vorobiev, S, Su, M, Seetharaman, J, Maglaqui, M, Xiao, R, Kohan, E, Wang, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-11-23
Release date:2011-12-14
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (1.692 Å)
Cite:Crystal Structure of the Q2S0R5 protein from Salinibacter ruber, Northeast Structural Genomics Consortium Target SrR207
To be Published
6QBW
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BU of 6qbw by Molmil
Structure of the HTLV-2 integrase catalytic core domain in complex with calcium
Descriptor: CALCIUM ION, integrase
Authors:Barski, M.S, Maertens, G.N.
Deposit date:2018-12-21
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Cryo-EM structure of the deltaretroviral intasome in complex with the PP2A regulatory subunit B56 gamma.
Nat Commun, 11, 2020
6QDY
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BU of 6qdy by Molmil
The crystal structure of Sporosarcina pasteurii urease in complex with its substrate urea
Descriptor: 1,2-ETHANEDIOL, FLUORIDE ION, NICKEL (II) ION, ...
Authors:Mazzei, L, Cianci, M, Benini, S, Ciurli, S.
Deposit date:2019-01-03
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.416 Å)
Cite:The Structure of the Elusive Urease-Urea Complex Unveils the Mechanism of a Paradigmatic Nickel-Dependent Enzyme.
Angew.Chem.Int.Ed.Engl., 58, 2019
2N9K
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BU of 2n9k by Molmil
1H, 13C, and 15N Chemical Shift Assignments for in vitro GB1
Descriptor: Immunoglobulin G-binding protein G
Authors:Ikeya, T, Hanashima, T, Hosoya, S, Shimazaki, M, Ikeda, S, Mishima, M, Guentert, P, Ito, Y.
Deposit date:2015-11-26
Release date:2016-12-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Improved in-cell structure determination of proteins at near-physiological concentration
Sci Rep, 6, 2016
6QEO
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BU of 6qeo by Molmil
Crystal structure of Porcine Pancreatic Elastase (PPE) in complex with the 3-Oxo-beta-Sultam inhibitor LMC269
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-methyl-1-[[1-[(4-nitrophenyl)methyl]-1,2,3-triazol-4-yl]methylamino]-1-oxidanylidene-propane-2-sulfonic acid, Chymotrypsin-like elastase family member 1, ...
Authors:Brito, J.A, Almeida, V.T, Carvalho, L.M, Moreira, R, Archer, M.
Deposit date:2019-01-08
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:3-Oxo-beta-sultam as a Sulfonylating Chemotype for Inhibition of Serine Hydrolases and Activity-Based Protein Profiling.
Acs Chem.Biol., 15, 2020
7N9Y
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BU of 7n9y by Molmil
Full-length TcdB and CSPG4 (401-560) complex
Descriptor: Chondroitin sulfate proteoglycan 4, Toxin B
Authors:Jiang, M, Zhang, J.
Deposit date:2021-06-18
Release date:2022-03-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
6CFM
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BU of 6cfm by Molmil
Crystal Structure of the Human vaccinia-related kinase bound to a propynyl-pteridinone inhibitor
Descriptor: (7R)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-7,8-dimethyl-5-(prop-2-yn-1-yl)-7,8-dihydropteridin-6(5H)-one, CHLORIDE ION, GLYCEROL, ...
Authors:Counago, R.M, dos Reis, C.V, de Souza, G.P, Azevedo, A, Guimaraes, C, Mascarello, A, Gama, F, Ferreira, M, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
Deposit date:2018-02-15
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of the Human vaccinia-related kinase bound to a propynyl-pteridinone inhibitor
To Be Published
2NDO
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BU of 2ndo by Molmil
Structure of EcDsbA-sulfonamide1 complex
Descriptor: 2-{[(4-iodophenyl)sulfonyl]amino}benzoic acid, Thiol:disulfide interchange protein DsbA
Authors:Williams, M.L, Doak, B.C, Vazirani, M, Ilyichova, O, Wang, G, Bermel, W, Simpson, J.S, Chalmers, D.K, King, G.F, Mobli, M, Scanlon, M.J.
Deposit date:2016-08-22
Release date:2017-02-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Determination of ligand binding modes in weak protein-ligand complexes using sparse NMR data.
J.Biomol.Nmr, 66, 2016
5A69
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BU of 5a69 by Molmil
GH20C, Beta-hexosaminidase from Streptococcus pneumoniae in complex with Gal-PUGNAc
Descriptor: N-ACETYL-BETA-D-GLUCOSAMINIDASE, [(Z)-[(3R,4R,5R,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-ylidene]amino] N-phenylcarbamate
Authors:Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
Deposit date:2015-06-24
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Second beta-Hexosaminidase Encoded in the Streptococcus pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans.
J. Biol. Chem., 290, 2015
6CL8
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BU of 6cl8 by Molmil
2.00 A MicroED structure of proteinase K at 2.6 e- / A^2
Descriptor: Proteinase K
Authors:Hattne, J, Shi, D, Glynn, C, Zee, C.-T, Gallagher-Jones, M, Martynowycz, M.W, Rodriguez, J.A, Gonen, T.
Deposit date:2018-03-02
Release date:2018-05-16
Last modified:2024-10-09
Method:ELECTRON CRYSTALLOGRAPHY (2 Å)
Cite:Analysis of Global and Site-Specific Radiation Damage in Cryo-EM.
Structure, 26, 2018
7N95
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BU of 7n95 by Molmil
state 1 of TcdB and FZD2 at pH5
Descriptor: Frizzled-2, Toxin B
Authors:Jiang, M, Zhang, J.
Deposit date:2021-06-16
Release date:2022-03-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
1JO6
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BU of 1jo6 by Molmil
Solution structure of the cytoplasmic N-terminus of the BK beta-subunit KCNMB2
Descriptor: potassium large conductance calcium-activated channel, subfamily M, beta member 2
Authors:Bentrop, D, Beyermann, M, Wissmann, R, Fakler, B.
Deposit date:2001-07-27
Release date:2001-11-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the "ball-and-chain" domain of KCNMB2, the beta 2-subunit of large conductance Ca2+- and voltage-activated potassium channels.
J.Biol.Chem., 276, 2001
6CLI
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BU of 6cli by Molmil
1.01 A MicroED structure of GSNQNNF at 0.17 e- / A^2
Descriptor: ACETATE ION, GSNQNNF, ZINC ION
Authors:Hattne, J, Shi, D, Glynn, C, Zee, C.-T, Gallagher-Jones, M, Martynowycz, M.W, Rodriguez, J.A, Gonen, T.
Deposit date:2018-03-02
Release date:2018-05-16
Last modified:2024-03-13
Method:ELECTRON CRYSTALLOGRAPHY (1.01 Å)
Cite:Analysis of Global and Site-Specific Radiation Damage in Cryo-EM.
Structure, 26, 2018
6CLR
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BU of 6clr by Molmil
1.31 A MicroED structure of GSNQNNF at 3.1 e- / A^2
Descriptor: ACETATE ION, GSNQNNF, ZINC ION
Authors:Hattne, J, Shi, D, Glynn, C, Zee, C.-T, Gallagher-Jones, M, Martynowycz, M.W, Rodriguez, J.A, Gonen, T.
Deposit date:2018-03-02
Release date:2018-05-16
Last modified:2024-03-13
Method:ELECTRON CRYSTALLOGRAPHY (1.31 Å)
Cite:Analysis of Global and Site-Specific Radiation Damage in Cryo-EM.
Structure, 26, 2018
6QD0
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BU of 6qd0 by Molmil
MloK1 model from single particle analysis of 2D crystals, class 4 (compact/open conformation)
Descriptor: Cyclic nucleotide-gated potassium channel mll3241, POTASSIUM ION
Authors:Righetto, R, Biyani, N, Kowal, J, Chami, M, Stahlberg, H.
Deposit date:2018-12-31
Release date:2019-04-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Retrieving high-resolution information from disordered 2D crystals by single-particle cryo-EM.
Nat Commun, 10, 2019

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