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PDB: 52230 results

6HVQ
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The structure of Dps from Listeria innocua soaked before soaking experiments with Zn, Co and La
Descriptor: DNA protection during starvation protein, LANTHANUM (III) ION
Authors:Zeth, K, Okuda, M.
Deposit date:2018-10-11
Release date:2019-09-04
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Metal Positions and Translocation Pathways of the Dodecameric Ferritin-like Protein Dps.
Inorg.Chem., 58, 2019
6HXV
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Crystal structure of the head and coiled-coil domains of zebrafish CCDC61 (F129E/D130A)
Descriptor: Coiled-coil domain-containing protein 61
Authors:Barnabas, D, Ochi, T, van Breugel, M.
Deposit date:2018-10-18
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:CCDC61/VFL3 Is a Paralog of SAS6 and Promotes Ciliary Functions.
Structure, 28, 2020
3RCE
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Bacterial oligosaccharyltransferase PglB
Descriptor: MAGNESIUM ION, Oligosaccharide transferase to N-glycosylate proteins, Substrate Mimic Peptide
Authors:Lizak, C, Gerber, S, Numao, S, Aebi, M, Locher, K.P.
Deposit date:2011-03-31
Release date:2011-06-15
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:X-ray structure of a bacterial oligosaccharyltransferase.
Nature, 474, 2011
3RKE
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Crystal Structure of goat Lactoperoxidase complexed with a tightly bound inhibitor, 4-aminophenyl-4H-imidazole-1-yl methanone at 2.3 A resolution
Descriptor: (4-aminophenyl)-imidazol-1-yl-methanone, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Dube, D, Singh, R.P, Sinha, M, Singh, A.K, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-04-18
Release date:2011-05-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of goat Lactoperoxidase complexed with a tightly bound inhibitor, 4-aminophenyl-4H-imidazole-1-yl methanone at 2.3 A resolution
TO BE PUBLISHED
3RKS
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BU of 3rks by Molmil
Crystal Structure of the Manihot esculenta Hydroxynitrile Lyase (MeHNL) K176P mutant
Descriptor: GLYCEROL, Hydroxynitrilase
Authors:Cielo, C.B.C, Yamane, T, Asano, Y, Dadashipour, M, Suzuki, A, Mizushima, T, Komeda, H.
Deposit date:2011-04-18
Release date:2012-06-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic Studies of Manihot esculenta hydroxynitrile lyase Lysine-to-Proline mutants
To be Published
3RL9
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Crystal Structure of the complex of type I RIP with the hydrolyzed product of dATP, adenine at 1.9 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, GLYCEROL, ...
Authors:Kushwaha, G.S, Pandey, N, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-04-19
Release date:2011-05-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of a type-1 ribosome inactivating protein from Momordica balsamina in the bound and unbound states
Biochim.Biophys.Acta, 1824, 2012
6HZ1
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BU of 6hz1 by Molmil
THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL MUTANT E243C
Descriptor: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
Authors:Hu, H.D, Delarue, M.
Deposit date:2018-10-22
Release date:2018-12-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Electrostatics, proton sensor, and networks governing the gating transition in GLIC, a proton-gated pentameric ion channel.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6HBC
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Structure of the repeat unit in the network formed by CcmM and Rubisco from Synechococcus elongatus
Descriptor: Carbon dioxide concentrating mechanism protein CcmM, Ribulose 1,5-bisphosphate carboxylase small subunit, Ribulose bisphosphate carboxylase large chain
Authors:Wang, H, Yan, X, Aigner, H, Bracher, A, Nguyen, N.D, Hee, W.Y, Long, B.M, Price, G.D, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2018-08-10
Release date:2018-12-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Rubisco condensate formation by CcmM in beta-carboxysome biogenesis.
Nature, 566, 2019
3RHI
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DNA-binding protein HU from Bacillus anthracis
Descriptor: DNA-binding protein HU
Authors:Osipiuk, J, Makowska-Grzyska, M, Hasseman, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-04-11
Release date:2011-04-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:DNA-binding protein HU from Bacillus anthracis.
To be Published
6HDY
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BU of 6hdy by Molmil
Crystal structure of 2-Hydroxyisobutyryl-CoA Ligase (HCL) in the postadenylation state in complex with S3-HB-AMP
Descriptor: (3S)-3-HYDROXYBUTANOIC ACID, 2-hydroxyisobutyryl-CoA synthetase, SULFATE ION, ...
Authors:Zahn, M, Rohwerder, T, Strater, N.
Deposit date:2018-08-20
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of 2-Hydroxyisobutyric Acid-CoA Ligase Reveal Determinants of Substrate Specificity and Describe a Multi-Conformational Catalytic Cycle.
J.Mol.Biol., 431, 2019
6I0V
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BU of 6i0v by Molmil
Crystal structure of DmTailor in complex with CACAGU RNA
Descriptor: MAGNESIUM ION, RNA (5'-R(*CP*AP*CP*AP*GP*U)-3'), Terminal uridylyltransferase Tailor
Authors:Kroupova, A, Ivascu, A, Jinek, M.
Deposit date:2018-10-26
Release date:2018-12-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Structural basis for acceptor RNA substrate selectivity of the 3' terminal uridylyl transferase Tailor.
Nucleic Acids Res., 47, 2019
3RI9
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Xylanase C from Aspergillus kawachii F131W mutant
Descriptor: Endo-1,4-beta-xylanase 3
Authors:Fushinobu, S, Uno, T, Kitaoka, M, Hayashi, K, Matsuzawa, H, Wakagi, T.
Deposit date:2011-04-13
Release date:2011-09-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutational analysis of fungal family 11 xylanases on pH optimum determination
J.APPL.GLYOSCI., 58, 2011
3RO3
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BU of 3ro3 by Molmil
crystal structure of LGN/mInscuteable complex
Descriptor: CHLORIDE ION, ETHANOL, G-protein-signaling modulator 2, ...
Authors:Zhu, J, Wen, W, Shang, Y, Wei, Z, Pan, Z, Wang, W, Zhang, M.
Deposit date:2011-04-25
Release date:2012-03-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:LGN/mInsc and LGN/NuMA complex structures suggest distinct functions in asymmetric cell division for the Par3/mInsc/LGN and G[alpha]i/LGN/NuMA pathways
Mol.Cell, 43, 2011
6H8J
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BU of 6h8j by Molmil
1.45 A resolution of Sporosarcina pasteurii urease inhibited in the presence of NBPTO
Descriptor: 1,2-ETHANEDIOL, DIAMIDOPHOSPHATE, NICKEL (II) ION, ...
Authors:Mazzei, L, Cianci, M, Ciurli, S.
Deposit date:2018-08-02
Release date:2019-06-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Insights into Urease Inhibition by N-( n-Butyl) Phosphoric Triamide through an Integrated Structural and Kinetic Approach.
J.Agric.Food Chem., 67, 2019
6H99
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BU of 6h99 by Molmil
Crystal structure of anaerobic ergothioneine biosynthesis enzyme from Chlorobium limicola in persulfide form.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Leisinger, F, Burn, R, Meury, M, Lukat, P, Seebeck, F.P.
Deposit date:2018-08-03
Release date:2019-06-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and Mechanistic Basis for Anaerobic Ergothioneine Biosynthesis.
J.Am.Chem.Soc., 141, 2019
3RQ6
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BU of 3rq6 by Molmil
Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis soaked with ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, ADP/ATP-dependent NAD(P)H-hydrate dehydratase, MAGNESIUM ION
Authors:Shumilin, I.A, Cymborowski, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-04-27
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3RTA
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Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima soaked with Acetyl Coenzyme A
Descriptor: ACETYL COENZYME *A, POTASSIUM ION, Putative uncharacterized protein, ...
Authors:Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
Deposit date:2011-05-03
Release date:2011-06-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3R1O
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BU of 3r1o by Molmil
Odorant Binding Protein 7 from Anopheles gambiae with Four Disulfide Bridges
Descriptor: Odorant binding protein, antennal, PALMITIC ACID
Authors:Lagarde, A, Spinelli, S, Tegoni, M, Field, L, He, X, Zhou, J.J, Cambillau, C.
Deposit date:2011-03-11
Release date:2011-10-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of Odorant Binding Protein 7 from Anopheles gambiae Exhibits an Outstanding Adaptability of Its Binding Site.
J.Mol.Biol., 414, 2011
3RQS
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Crystal Structure of human L-3- Hydroxyacyl-CoA dehydrogenase (EC1.1.1.35) from mitochondria at the resolution 2.0 A, Northeast Structural Genomics Consortium Target HR487, Mitochondrial Protein Partnership
Descriptor: GLYCEROL, Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial
Authors:Kuzin, A, Su, M, Seetharaman, J, Patel, P, Xiao, R, Ciccosanti, C, Shastry, R, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG), Mitochondrial Protein Partnership (MPP)
Deposit date:2011-04-28
Release date:2011-05-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Northeast Structural Genomics Consortium Target HR487
To be published
3R5Z
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Structure of a Deazaflavin-dependent reductase from Nocardia farcinica, with co-factor F420
Descriptor: COENZYME F420, Putative uncharacterized protein, SULFATE ION
Authors:Cellitti, S.E, Shaffer, J, Jones, D.H, Mukherjee, T, Gurumurthy, M, Bursulaya, B, Boshoff, H.I.M, Choi, I, Nayya, A, Lee, Y.S, Cherian, J, Niyomrattanakit, P, Dick, T, Manjunatha, U.H, Barry, C.E, Spraggon, G, Geierstanger, B.H.
Deposit date:2011-03-20
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.503 Å)
Cite:Structure of Ddn, the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824.
Structure, 20, 2012
3R2R
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1.65A resolution structure of Iron Soaked FtnA from Pseudomonas aeruginosa (pH 6.0)
Descriptor: Bacterioferritin, FE (III) ION, SODIUM ION, ...
Authors:Lovell, S.W, Battaile, K.P, Yao, H, Jepkorir, G, Nama, P.V, Weeratunga, S, Rivera, M.
Deposit date:2011-03-14
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Two distinct ferritin-like molecules in Pseudomonas aeruginosa: the product of the bfrA gene is a bacterial ferritin (FtnA) and not a bacterioferritin (Bfr).
Biochemistry, 50, 2011
5M11
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Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
Descriptor: CACODYLATE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Lasica, A.M, Goulas, T, Mizgalska, D, Zhou, X, Ksiazek, M, Madej, M, Guo, Y, Guevara, T, Nowak, M, Potempa, B, Goel, A, Sztukowska, M, Prabhakar, A.T, Bzowska, M, Widziolek, M, Thogersen, I.B, Enghild, J.J, Simonian, M, Kulczyk, A.W, Nguyen, K.-A, Potempa, J, Gomis-Ruth, F.X.
Deposit date:2016-10-07
Release date:2016-11-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
Sci Rep, 6, 2016
3R72
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Apis mellifera odorant binding protein 5
Descriptor: N-BUTYL-BENZENESULFONAMIDE, Odorant binding protein ASP5
Authors:Spinelli, S, Iovinella, I, Lagarde, A, Tegoni, M, Pelosi, P, Cambillau, C.
Deposit date:2011-03-22
Release date:2012-04-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of Apis mellifera odorant binding protein 5
To be Published
3R5O
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Crystal structure of the complex of bovine lactoperoxidase with 4-allyl-2-methoxyphenol at 2.6 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pandey, N, Singh, A.K, Singh, R.P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-03-19
Release date:2011-08-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the complex of bovine lactoperoxidase with 4-allyl-2-methoxyphenol at 2.6 A resolution
To be Published
3R77
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Crystal structure of the D38A mutant of isochorismatase PhzD from Pseudomonas fluorescens 2-79 in complex with 2-amino-2-desoxyisochorismate ADIC
Descriptor: (5S,6S)-6-amino-5-[(1-carboxyethenyl)oxy]cyclohexa-1,3-diene-1-carboxylic acid, CHLORIDE ION, Probable isochorismatase
Authors:Li, Q.A, Mavrodi, D.V, Thomashow, L.S, Roessle, M, Blankenfeldt, W.
Deposit date:2011-03-22
Release date:2011-03-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ligand Binding Induces an Ammonia Channel in 2-Amino-2-desoxyisochorismate (ADIC) Synthase PhzE.
J.Biol.Chem., 286, 2011

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