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PDB: 51964 results

327D
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CRYSTAL STRUCTURES OF D(GM5CGM5CGCGCGC)
Descriptor: DNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*CP*GP*C)-3')
Authors:Tippin, D.B, Ramakrishnan, B, Sundaralingam, M.
Deposit date:1997-03-17
Release date:1997-05-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Methylation of the Z-DNA decamer d(GC)5 potentiates the formation of A-DNA: crystal structure of d(Gm5CGm5CGCGCGC).
J.Mol.Biol., 270, 1997
4XSK
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Structure of PAItrap, an uPA mutant
Descriptor: GLYCEROL, SULFATE ION, TRIETHYLENE GLYCOL, ...
Authors:Gong, L, Proulle, V, Hong, Z, Lin, Z, Liu, M, Yuan, C, Lin, L, Furie, B, Flaumenhaft, R, Andreasen, P, Furie, B, Huang, M.
Deposit date:2015-01-22
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of PAItrap, an uPA mutant
To Be Published
2RQE
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BU of 2rqe by Molmil
Solution structure of the silkworm bGRP/GNBP3 N-terminal domain reveals the mechanism for b-1,3-glucan specific recognition
Descriptor: Beta-1,3-glucan-binding protein
Authors:Takahasi, K, Ochiai, M, Horiuchi, M, Kumeta, H, Ogura, K, Ashida, M, Inagaki, F.
Deposit date:2009-04-22
Release date:2009-06-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the silkworm betaGRP/GNBP3 N-terminal domain reveals the mechanism for beta-1,3-glucan-specific recognition.
Proc.Natl.Acad.Sci.USA, 106, 2009
3V89
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BU of 3v89 by Molmil
The crystal structure of transferrin binding protein A (TbpA) from Neisseria meningitidis serogroup B in complex with the C-lobe of human transferrin
Descriptor: Serotransferrin, Transferrin-binding protein A
Authors:Noinaj, N, Oke, M, Easley, N, Zak, O, Aisen, P, Buchanan, S.K.
Deposit date:2011-12-22
Release date:2012-02-15
Last modified:2012-04-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for iron piracy by pathogenic Neisseria.
Nature, 483, 2012
2MFF
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BU of 2mff by Molmil
Csr/Rsm protein-RNA recognition - A molecular affinity ruler: RsmZ(SL3)/RsmE(dimer) 2:1 complex
Descriptor: Carbon storage regulator homolog, SL3(RsmZ) RNA
Authors:Duss, O, Diarra Dit Konte, N, Michel, E, Schubert, M, Allain, F.H.-T.
Deposit date:2013-10-11
Release date:2014-02-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Molecular basis for the wide range of affinity found in Csr/Rsm protein-RNA recognition.
Nucleic Acids Res., 42, 2014
1OL1
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BU of 1ol1 by Molmil
Cyclin A binding groove inhibitor H-Cit-Cit-Leu-Ile-(p-F-Phe)-NH2
Descriptor: CELL DIVISION PROTEIN KINASE 2, CIR-CIR-LEU-ILE-PFF-NH2, CYCLIN A2
Authors:Kontopidis, G, Andrews, M, McInnes, C, Cowan, A, Powers, H, Innes, L, Plater, A, Griffiths, G, Paterson, D, Zheleva, D, Lane, D, Green, S, Walkinshaw, M, Fischer, P.
Deposit date:2003-08-04
Release date:2003-12-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Insights Into Cyclin Groove Recognition. Complex Crystal Structures and Inhibitor Design Through Ligand Exchange
Structure, 11, 2003
2ME6
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BU of 2me6 by Molmil
NMR Structure of the homeodomain transcription factor Gbx1 from Homo sapiens in complex with the DNA sequence CGACTAATTAGTCG
Descriptor: DNA (5'-D(*CP*GP*AP*CP*TP*AP*AP*TP*TP*AP*GP*TP*CP*G)-3'), Homeobox protein GBX-1
Authors:Proudfoot, A, Serrano, P, Geralt, M, Wuthrich, K, Joint Center for Structural Genomics (JCSG), Partnership for Stem Cell Biology (STEMCELL)
Deposit date:2013-09-23
Release date:2013-10-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Structure of the homeodomain transcription factor Gbx1 from Homo sapiens in complex with the DNA sequence CGACTAATTAGTCG
To be Published
3A03
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Crystal structure of Hox11L1 homeodomain
Descriptor: SODIUM ION, SULFATE ION, T-cell leukemia homeobox protein 2
Authors:Miyazono, K, Nagata, K, Saigo, K, Kojima, T, Tanokura, M.
Deposit date:2009-02-28
Release date:2010-03-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Cooperative DNA-binding and sequence-recognition mechanism of aristaless and clawless
Embo J., 29, 2010
2MJI
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HIFABP_Ketorolac_complex
Descriptor: (1R)-5-benzoyl-2,3-dihydro-1H-pyrrolizine-1-carboxylic acid, Fatty acid-binding protein, intestinal
Authors:Patil, R, Laguerre, A, Wielens, J, Headey, S, Williams, M, Mohanty, B, Porter, C, Scanlon, M.
Deposit date:2014-01-09
Release date:2014-10-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Characterization of two distinct modes of drug binding to human intestinal Fatty Acid binding protein.
Acs Chem.Biol., 9, 2014
2M1O
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BU of 2m1o by Molmil
ID3 stem
Descriptor: RNA (5'-R(P*AP*GP*CP*AP*CP*CP*C)-3'), RNA (5'-R(P*GP*GP*GP*UP*GP*UP*A)-3')
Authors:Popovic, M, Greenbaum, N.L.
Deposit date:2012-12-03
Release date:2013-02-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:ID3 stem
To be Published
3VCB
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BU of 3vcb by Molmil
C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59
Descriptor: RNA-directed RNA polymerase
Authors:Xu, X, Lou, Z, Ma, Y, Chen, X, Yang, Z, Tong, X, Zhao, Q, Xu, Y, Deng, H, Bartlam, M, Rao, Z.
Deposit date:2012-01-03
Release date:2012-01-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59.
Plos One, 4, 2009
3ACD
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BU of 3acd by Molmil
Crystal structure of hypoxanthine-guanine phosphoribosyltransferase with IMP from Thermus thermophilus HB8
Descriptor: 1,4-DIETHYLENE DIOXIDE, Hypoxanthine-guanine phosphoribosyltransferase, INOSINIC ACID
Authors:Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-12-30
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010
3A29
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BU of 3a29 by Molmil
Crystal structure of human liver FBPase in complex with tricyclic inhibitor
Descriptor: 2-amino-4,5-dihydronaphtho[1,2-d][1,3]thiazol-8-yl dihydrogen phosphate, Fructose-1,6-bisphosphatase 1
Authors:Takahashi, M, Sone, J, Hanzawa, H.
Deposit date:2009-05-08
Release date:2009-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Synthesis, SAR, and X-ray structure of tricyclic compounds as potent FBPase inhibitors
Bioorg.Med.Chem.Lett., 19, 2009
2MLL
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BU of 2mll by Molmil
MISTLETOE LECTIN I FROM VISCUM ALBUM
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II)
Authors:Krauspenhaar, R, Eschenburg, S, Perbandt, M, Kornilov, V, Konareva, N, Mikailova, I, Stoeva, S, Wacker, R, Maier, T, Singh, T.P, Mikhailov, A, Voelter, W, Betzel, C.
Deposit date:1999-03-16
Release date:2000-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of mistletoe lectin I from Viscum album.
Biochem.Biophys.Res.Commun., 257, 1999
3A4A
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BU of 3a4a by Molmil
Crystal structure of isomaltase from Saccharomyces cerevisiae
Descriptor: CALCIUM ION, Oligo-1,6-glucosidase, alpha-D-glucopyranose
Authors:Yamamoto, K, Miyake, H, Kusunoki, M, Osaki, S.
Deposit date:2009-07-01
Release date:2010-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of isomaltase from Saccharomyces cerevisiae and in complex with its competitive inhibitor maltose
Febs J., 277, 2010
3VDF
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BU of 3vdf by Molmil
Crystal Structure of C-lobe of Bovine lactoferrin Complexed with diaminopimelic acid at 1.46 A Resolution
Descriptor: 2,6-DIAMINOPIMELIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shukla, P.K, Gautam, L, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2012-01-05
Release date:2012-01-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Crystal Structure of C-lobe of Bovine lactoferrin Complexed with diaminopimelic acid at 1.46 A Resolution
To be Published
2ZYF
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BU of 2zyf by Molmil
Crystal structure of homocitrate synthase from Thermus thermophilus complexed with magnesuim ion and alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, Homocitrate synthase, MAGNESIUM ION
Authors:Okada, T, Tomita, T, Kuzuyama, T, Nishiyama, M.
Deposit date:2009-01-20
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Mechanism of substrate recognition and insight into feedback inhibition of homocitrate synthase from thermus thermophilus
J.Biol.Chem., 2009
3VG4
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Cadmium derivative of human LFABP
Descriptor: CADMIUM ION, Fatty acid-binding protein, liver, ...
Authors:Sharma, A, Yogavel, M, Sharma, A.
Deposit date:2011-08-03
Release date:2012-06-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Utility of anion and cation combinations for phasing of protein structures.
J.Struct.Funct.Genom., 13, 2012
2MJ9
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BU of 2mj9 by Molmil
Designed Exendin-4 analogues
Descriptor: Exendin-4
Authors:Rovo, P, Farkas, V, Straner, P, Szabo, M, Jermendy, A, Hegyi, O, Toth, G.K, Perczel, A.
Deposit date:2013-12-30
Release date:2014-06-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Rational design of alpha-helix-stabilized exendin-4 analogues.
Biochemistry, 53, 2014
2ZYJ
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Crystal structure of LysN, alpha-aminoadipate aminotransferase (complexed with N-(5'-phosphopyridoxyl)-L-glutamate), from Thermus thermophilus HB27
Descriptor: Alpha-aminodipate aminotransferase, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid
Authors:Ouchi, T, Tomita, T, Kuzuyama, T, Nishiyama, M.
Deposit date:2009-01-26
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Dual roles of a conserved pair, Arg23 and Ser20, in recognition of multiple substrates in alpha-aminoadipate aminotransferase from Thermus thermophilus.
Biochem.Biophys.Res.Commun., 388, 2009
3VHS
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Crystal structure of UBZ of human WRNIP1
Descriptor: ATPase WRNIP1, SODIUM ION, ZINC ION
Authors:Suzuki, N, Wakatsuki, S, Kawasaki, M.
Deposit date:2011-09-06
Release date:2012-10-10
Last modified:2016-06-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 2016
3VI4
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Crystal structure of alpha5beta1 integrin headpiece in complex with RGD peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Nagae, M, Nogi, T, Takagi, J.
Deposit date:2011-09-21
Release date:2012-02-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of alpha5beta1 integrin ectodomain: Atomic details of the fibronectin receptor
J.Cell Biol., 197, 2012
3VJR
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Crystal structure of Peptidyl-tRNA hydrolase from Escherichia coli in complex with the CCA-acceptor-T[PSI]C domain of tRNA
Descriptor: Peptidyl-tRNA hydrolase, tRNA CCA-acceptor
Authors:Ito, K, Murakami, R, Mochizuki, M, Qi, H, Shimizu, Y, Miura, K.I, Ueda, T, Uchiumi, T.
Deposit date:2011-10-28
Release date:2012-09-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the substrate recognition and catalysis of peptidyl-tRNA hydrolase.
Nucleic Acids Res., 40, 2012
322D
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CRYSTAL STRUCTURES OF D(CCGGGCCM5CGG)-HEXAGONAL FORM
Descriptor: DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*(5CM)P*GP*G)-3')
Authors:Tippin, D.B, Sundaralingam, M.
Deposit date:1997-03-17
Release date:1997-05-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA.
J.Mol.Biol., 267, 1997
2M51
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NMR structure of the SH3 domain of human RAS p21 protein activator (GTPase activating protein) 1
Descriptor: Ras GTPase-activating protein 1
Authors:Dutta, S.K, Serrano, P, Geralt, M, Wuthrich, K, Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
Deposit date:2013-02-12
Release date:2013-03-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of the SH3 domain of human RAS p21 protein activator (GTPase activating protein) 1
To be Published

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