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PDB: 51787 results

4EK7
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BU of 4ek7 by Molmil
High speed X-ray analysis of plant enzymes at room temperature
Descriptor: CHLORIDE ION, Raucaffricine-O-beta-D-glucosidase, beta-D-glucopyranose
Authors:Xia, L, Rajendran, C, Ruppert, M, Panjikar, S, Wang, M, Stoeckigt, J.
Deposit date:2012-04-09
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High speed X-ray analysis of plant enzymes at room temperature.
Phytochemistry, 2012
4EGD
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BU of 4egd by Molmil
1.85 Angstrom crystal structure of native hypothetical protein SAOUHSC_02783 from Staphylococcus aureus
Descriptor: CALCIUM ION, CHLORIDE ION, Uncharacterized protein SAOUHSC_02783
Authors:Biancucci, M, Minasov, G, Halavaty, A, Filippova, E.V, Shuvalova, L, Dubrovska, I, Winsor, J, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-03-30
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:1.85 Angstrom crystal structure of native hypothetical protein SAOUHSC_02783 from Staphylococcus aureus
TO BE PUBLISHED
2LD2
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BU of 2ld2 by Molmil
Solution structure of the N-terminal domain of huntingtin (htt17) in presence of DPC micelles
Descriptor: Huntingtin
Authors:Michalek, M, Salnikov, E.S, Werten, S, Bechinger, B.
Deposit date:2011-05-13
Release date:2012-05-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and Topology of the Huntingtin 1-17 Membrane Anchor by a Combined Solution and Solid-State NMR Approach.
Biophys.J., 105, 2013
2PE0
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BU of 2pe0 by Molmil
CRYSTAL STRUCTURE OF HUMAN PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 (PDK1) 5-Hydroxy-3-[1-(1H-pyrrol-2-yl)-eth-(Z)-ylidene]-1,3-dihydro-indol-2-one COMPLEX
Descriptor: 3-phosphoinositide-dependent protein kinase 1, 5-HYDROXY-3-[(1R)-1-(1H-PYRROL-2-YL)ETHYL]-2H-INDOL-2-ONE, GLYCEROL, ...
Authors:Whitlow, M, Adler, M.
Deposit date:2007-04-01
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Indolinone based phosphoinositide-dependent kinase-1 (PDK1) inhibitors. Part 1: Design, synthesis and biological activity.
Bioorg.Med.Chem.Lett., 17, 2007
3WKG
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BU of 3wkg by Molmil
Crystal structure of cellobiose 2-epimerase in complex with glucosylmannose
Descriptor: CHLORIDE ION, Cellobiose 2-epimerase, PHOSPHATE ION, ...
Authors:Fujiwara, T, Saburi, W, Tanaka, I, Yao, M.
Deposit date:2013-10-21
Release date:2013-12-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural Insights into the Epimerization of beta-1,4-Linked Oligosaccharides Catalyzed by Cellobiose 2-Epimerase, the Sole Enzyme Epimerizing Non-anomeric Hydroxyl Groups of Unmodified Sugars
J.Biol.Chem., 289, 2014
2LJ5
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BU of 2lj5 by Molmil
Description of the Structural fluctuations of proteins from structure-based calculations of Residual dipolar couplings
Descriptor: Ubiquitin
Authors:De Simone, A, Montalvao, R, Vendruscolo, M.
Deposit date:2011-09-06
Release date:2012-07-18
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Determination of structural fluctuations of proteins from structure-based calculations of residual dipolar couplings.
J.Biomol.Nmr, 53, 2012
2LNH
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BU of 2lnh by Molmil
Enterohaemorrhagic E. coli (EHEC) exploits a tryptophan switch to hijack host F-actin assembly
Descriptor: Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1, Neural Wiskott-Aldrich syndrome protein, Secreted effector protein EspF(U)
Authors:Aitio, O, Hellman, M, Skehan, B, Kesti, T, Leong, J.M, Saksela, K, Permi, P.
Deposit date:2011-12-28
Release date:2012-08-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Enterohaemorrhagic Escherichia coli exploits a tryptophan switch to hijack host f-actin assembly.
Structure, 20, 2012
2LEG
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BU of 2leg by Molmil
Membrane protein complex DsbB-DsbA structure by joint calculations with solid-state NMR and X-ray experimental data
Descriptor: Disulfide bond formation protein B, Thiol:disulfide interchange protein DsbA, UBIQUINONE-1, ...
Authors:Tang, M, Sperling, L.J, Berthold, D.A, Schwieters, C.D, Nesbitt, A.E, Nieuwkoop, A.J, Gennis, R.B, Rienstra, C.M.
Deposit date:2011-06-15
Release date:2011-10-26
Last modified:2023-06-14
Method:SOLID-STATE NMR
Cite:High-resolution membrane protein structure by joint calculations with solid-state NMR and X-ray experimental data.
J.Biomol.Nmr, 51, 2011
4XB9
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BU of 4xb9 by Molmil
R2-like ligand-binding oxidase with aerobically reconstituted diiron cofactor
Descriptor: FE (III) ION, PALMITIC ACID, Ribonuleotide reductase small subunit
Authors:Griese, J.J, Hogbom, M.
Deposit date:2014-12-16
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor.
J.Biol.Chem., 290, 2015
1LRP
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BU of 1lrp by Molmil
COMPARISON OF THE STRUCTURES OF CRO AND LAMBDA REPRESSOR PROTEINS FROM BACTERIOPHAGE LAMBDA
Descriptor: LAMBDA REPRESSOR
Authors:Pabo, C, Lewis, M.
Deposit date:1987-12-04
Release date:1989-01-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Comparison of the structures of cro and lambda repressor proteins from bacteriophage lambda.
J.Mol.Biol., 169, 1983
3WMP
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BU of 3wmp by Molmil
Crystal structure of SLL-2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kita, A, Jimbo, M, Sakai, R, Morimoto, Y, Miki, K.
Deposit date:2013-11-22
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a symbiosis-related lectin from octocoral.
Glycobiology, 25, 2015
3WN1
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BU of 3wn1 by Molmil
Crystal Structure of Streptomyces coelicolor alpha-L-arabinofuranosidase in complex with xylotriose
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Fujimoto, Z, Maehara, T, Ichinose, H, Michikawa, M, Harazono, K, Kaneko, S.
Deposit date:2013-11-29
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure and characterization of the glycoside hydrolase family 62 alpha-L-arabinofuranosidase from Streptomyces coelicolor
J.Biol.Chem., 289, 2014
2LPU
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BU of 2lpu by Molmil
Solution structures of KmAtg10
Descriptor: KmAtg10
Authors:Yamaguchi, M, Noda, N.N, Yamamoto, H, Shima, T, Kumeta, H, Kobashigawa, Y, Akada, R, Ohsumi, Y, Inagaki, F.
Deposit date:2012-02-19
Release date:2012-08-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights into atg10-mediated formation of the autophagy-essential atg12-atg5 conjugate
Structure, 20, 2012
3WC1
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BU of 3wc1 by Molmil
Crystal structure of C. albicans tRNA(His) guanylyltransferase (Thg1) with a G-1 deleted tRNA(His)
Descriptor: 75-mer tRNA, Likely histidyl tRNA-specific guanylyltransferase
Authors:Nakamura, A, Nemoto, T, Sonoda, T, Yamashita, K, Tanaka, I, Yao, M.
Deposit date:2013-05-24
Release date:2013-12-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4.18 Å)
Cite:Structural basis of reverse nucleotide polymerization
Proc.Natl.Acad.Sci.USA, 110, 2013
2LCM
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BU of 2lcm by Molmil
NMR structure of S3-4 peptide
Descriptor: Voltage-dependent N-type calcium channel subunit alpha-1B
Authors:Douzi, B, Darbon, H, De waar, M.
Deposit date:2011-05-02
Release date:2012-03-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:structure of S4-3 voltage sensor peptide
To be Published
2LLG
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BU of 2llg by Molmil
NMR structure of the protein NP_814968.1 from Enterococcus faecalis
Descriptor: Uncharacterized protein
Authors:Susac, L, Serrano, P, Geralt, M, Mohanty, B, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2011-11-08
Release date:2011-11-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of the protein NP_814968.1 from Enterococcus faecalis
To be Published
2OM7
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BU of 2om7 by Molmil
Structural Basis for Interaction of the Ribosome with the Switch Regions of GTP-bound Elongation Factors
Descriptor: 16S ribosomal RNA (H5), 30S ribosomal protein S12, 30S ribosomal protein S2, ...
Authors:Connell, S.R, Wilson, D.N, Rost, M, Schueler, M, Giesebrecht, J, Dabrowski, M, Mielke, T, Fucini, P, Spahn, C.M.T.
Deposit date:2007-01-21
Release date:2008-01-15
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (7.3 Å)
Cite:Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors.
Mol.Cell, 25, 2007
3WP3
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BU of 3wp3 by Molmil
Xylanase 11C from Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus)
Descriptor: Endo-1,4-beta-xylanase
Authors:Ishikawa, K, Inoue, H, Kataoka, M.
Deposit date:2014-01-09
Release date:2014-11-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) GH family 11 xylanase
Appl Biochem Biotechnol., 174, 2014
7ZQK
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BU of 7zqk by Molmil
Crystal structure of photosynthetic glyceraldehyde-3-phosphate dehydrogenase from Chlamydomonas reinhardtii (CrGAPA) complexed with NAD+
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Fermani, S, Zaffagnini, M, Lemaire, S.D, Falini, G, Fanti, S, Rossi, J.
Deposit date:2022-04-30
Release date:2022-07-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural snapshots of nitrosoglutathione binding and reactivity underlying S-nitrosylation of photosynthetic GAPDH.
Redox Biol, 54, 2022
2LOR
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BU of 2lor by Molmil
Backbone structure of human membrane protein TMEM141
Descriptor: Transmembrane protein 141
Authors:Bayrhuber, M, Klammt, C, Maslennikov, I, Riek, R, Choe, S.
Deposit date:2012-01-26
Release date:2012-05-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Facile backbone structure determination of human membrane proteins by NMR spectroscopy.
Nat.Methods, 9, 2012
7ZQ4
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BU of 7zq4 by Molmil
Crystal structure of photosynthetic glyceraldehyde-3-phosphate dehydrogenase from Chlamydomonas reinhardtii (CrGAPA) complexed with NADP+ and the oxidated catalytic cysteine
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase A, ...
Authors:Fermani, S, Zaffagnini, M, Lemaire, S.D, Falini, G, Fanti, S, Rossi, J.
Deposit date:2022-04-29
Release date:2022-07-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural snapshots of nitrosoglutathione binding and reactivity underlying S-nitrosylation of photosynthetic GAPDH.
Redox Biol, 54, 2022
2LFF
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BU of 2lff by Molmil
Solution structure of Diiron protein in presence of 8 eq Zn2+, Northeast Structural Genomics consortium target OR21
Descriptor: Diiron protein, ZINC ION
Authors:Pires, M, Wu, Y, Mills, J.L, Reig, A, Englander, W, Degrado, W, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-06-29
Release date:2011-08-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of Diiron protein in presence of 8 eq Zn2+
To be Published
8A4T
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BU of 8a4t by Molmil
crystal structures of diastereomer (S,S,S)-13b (13b-K) in complex with the SARS-CoV-2 Mpro
Descriptor: 3C-like proteinase nsp5, CHLORIDE ION, ~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:Ibrahim, M, Hilgenfeld, R, Zhang, L.
Deposit date:2022-06-13
Release date:2022-10-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Diastereomeric Resolution Yields Highly Potent Inhibitor of SARS-CoV-2 Main Protease.
J.Med.Chem., 65, 2022
3WFI
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BU of 3wfi by Molmil
The crystal structure of D-mandelate dehydrogenase
Descriptor: 2-dehydropantoate 2-reductase
Authors:Miyanaga, A, Fujisawa, S, Furukawa, N, Arai, K, Nakajima, M, Taguchi, H.
Deposit date:2013-07-19
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:The crystal structure of D-mandelate dehydrogenase reveals its distinct substrate and coenzyme recognition mechanisms from those of 2-ketopantoate reductase.
Biochem.Biophys.Res.Commun., 439, 2013
2LGC
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BU of 2lgc by Molmil
Joint NMR and X-ray refinement reveals the structure of a novel dibenzo[a,d]cycloheptenone inhibitor/p38 MAP kinase complex in solution
Descriptor: Mitogen-activated protein kinase 14
Authors:Habeck, M.
Deposit date:2011-07-25
Release date:2012-07-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Inferential NMR/X-ray-based structure determination of a dibenzo[a,d]cycloheptenone inhibitor-p38alpha MAP kinase complex in solution
Angew.Chem.Int.Ed.Engl., 51, 2012

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