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PDB: 51964 results

4L36
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BU of 4l36 by Molmil
Crystal structure of the cytochrome P450 enzyme TxtE
Descriptor: HEME B/C, IMIDAZOLE, Putative P450-like protein
Authors:Yu, F, Li, M.J, Xu, C.Y, Wang, Z.J, Zhou, H, Yang, M, Chen, Y.X, Tang, L, He, J.H.
Deposit date:2013-06-05
Release date:2013-12-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Structural Insights into the Mechanism for Recognizing Substrate of the Cytochrome P450 Enzyme TxtE.
Plos One, 8, 2013
4MLI
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BU of 4mli by Molmil
Crystal structure of the SpyTag/SpyCatcher complex
Descriptor: Fibronectin binding protein, SpyTag
Authors:Li, L, Fierer, J.O, Rapoport, T.A, Howarth, M.
Deposit date:2013-09-06
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Analysis and Optimization of the Covalent Association between SpyCatcher and a Peptide Tag.
J.Mol.Biol., 426, 2014
6HT0
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BU of 6ht0 by Molmil
Crystal structure of MLLT1 (ENL) YEATS domain in complexed with compound 94
Descriptor: 1,2-ETHANEDIOL, 1-cyclopropyl-~{N}-[2-[[(2~{S})-2-methylpyrrolidin-1-yl]methyl]-3~{H}-benzimidazol-5-yl]indazole-5-carboxamide, Protein ENL, ...
Authors:Heidenreich, D, Chaikuad, A, Moustakim, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Fedorov, O, Brennan, P.E, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2018-10-02
Release date:2018-10-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of an MLLT1/3 YEATS Domain Chemical Probe.
Angew. Chem. Int. Ed. Engl., 57, 2018
6E4D
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BU of 6e4d by Molmil
Atomic structure of Mycobacterium tuberculosis DppA
Descriptor: Periplasmic dipeptide-binding lipoprotein DPPA, VAL-VAL-VAL-ALA
Authors:Ko, Y, Mitra, A, Niederweis, M, Cingolani, G.
Deposit date:2018-07-17
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.252 Å)
Cite:Heme and hemoglobin utilization by Mycobacterium tuberculosis.
Nat Commun, 10, 2019
3RGY
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BU of 3rgy by Molmil
Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Lipopolysaccharide at 2.0 A Resolution
Descriptor: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shukla, P.K, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-04-11
Release date:2011-05-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Lipopolysaccharide at 2.0 A Resolution
To be Published
1IT3
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BU of 1it3 by Molmil
Hagfish CO ligand hemoglobin
Descriptor: CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, hemoglobin
Authors:Mito, M, Chong, K.T, Park, S.-Y, Tame, J.R.
Deposit date:2002-01-05
Release date:2002-01-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of deoxy- and carbonmonoxyhemoglobin F1 from the hagfish Eptatretus burgeri
J.Biol.Chem., 277, 2002
6E4L
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BU of 6e4l by Molmil
The structure of the N-terminal domain of human clathrin heavy chain 1 (nTD) in complex with ES9
Descriptor: 1,2-ETHANEDIOL, 5-bromo-N-(4-nitrophenyl)thiophene-2-sulfonamide, ACETATE ION, ...
Authors:Dejonghe, W, Sharma, I, Denoo, B, Munck, S.D, Bulut, H, Mylle, E, Vasileva, M, Lu, Q, Savatin, D.V, Mishev, K, Nerinckx, W, Staes, A, Drozdzecki, A, Audenaert, D, Madder, A, Friml, J, Damme, D.V, Gevaert, K, Haucke, V, Savvides, S, Winne, J, Russinova, E.
Deposit date:2018-07-17
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Disruption of endocytosis through chemical inhibition of clathrin heavy chain function.
Nat.Chem.Biol., 15, 2019
6HEK
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BU of 6hek by Molmil
Structure of human USP28 bound to Ubiquitin-PA
Descriptor: CHLORIDE ION, Polyubiquitin-B, TETRAETHYLENE GLYCOL, ...
Authors:Gersch, M, Komander, D.
Deposit date:2018-08-20
Release date:2019-03-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Distinct USP25 and USP28 Oligomerization States Regulate Deubiquitinating Activity.
Mol.Cell, 74, 2019
1IJ6
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BU of 1ij6 by Molmil
CA2+-BOUND STRUCTURE OF MULTIDOMAIN EF-HAND PROTEIN, CBP40, FROM TRUE SLIME MOLD
Descriptor: CALCIUM ION, PLASMODIAL SPECIFIC LAV1-2 PROTEIN
Authors:Iwasaki, W, Sasaki, H, Nakamura, A, Kohama, K, Tanokura, M.
Deposit date:2001-04-25
Release date:2003-02-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Metal-Free and Ca(2+)-Bound Structures of a Multidomain EF-Hand Protein, CBP40, from the Lower Eukaryote Physarum polycephalum
Structure, 11, 2003
3RST
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BU of 3rst by Molmil
Crystal structure of Bacillus subtilis signal peptide peptidase A
Descriptor: Signal peptide peptidase sppA
Authors:Nam, S.E, Paetzel, M.
Deposit date:2011-05-02
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal Structure of Bacillus subtilis Signal Peptide Peptidase A.
J.Mol.Biol., 419, 2012
6TPF
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BU of 6tpf by Molmil
Fragment-based discovery of pyrazolopyridones as JAK1 inhibitors with excellent subtype selectivity
Descriptor: (1~{S})-2,2-bis(fluoranyl)-~{N}-[4-(3-methyl-6-oxidanylidene-2,7-dihydropyrazolo[3,4-b]pyridin-4-yl)cyclohexyl]cyclopropane-1-carboxamide, Tyrosine-protein kinase JAK1
Authors:Hansen, B.B, Jepsen, T.H, Larsen, M, Sindet, R, Vifian, T, Burhardt, M.N, Larsen, J, Seitzberg, J.G, Carnerup, M.A, Jerre, A, Molck, C, Rai, S, Nasipireddy, V.R, Griessner, A, Ritzen, A.
Deposit date:2019-12-13
Release date:2020-06-10
Last modified:2020-07-22
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Fragment-Based Discovery of Pyrazolopyridones as JAK1 Inhibitors with Excellent Subtype Selectivity.
J.Med.Chem., 63, 2020
5OXX
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BU of 5oxx by Molmil
Crystal structure of NeqN/NeqC complex from Nanoarcheaum equitans at 1.7A
Descriptor: NEQ068, NEQ528
Authors:Aparicio, D, Perez-Luque, R, Ribo, M, Fita, I.
Deposit date:2017-09-07
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural Insights into Subunits Assembly and the Oxyester Splicing Mechanism of Neq pol Split Intein.
Cell Chem Biol, 25, 2018
6E24
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BU of 6e24 by Molmil
Ternary structure of c-Myc-TBP-TAF1
Descriptor: Transcription initiation factor TFIID subunit 1,Myc proto-oncogene protein,TATA-box-binding protein
Authors:Wei, Y, Dong, A, Sunnerhagen, M, Penn, L, Tong, Y, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2018-07-10
Release date:2019-10-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Multiple direct interactions of TBP with the MYC oncoprotein.
Nat.Struct.Mol.Biol., 26, 2019
3V1A
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BU of 3v1a by Molmil
Crystal structure of de novo designed MID1-apo1
Descriptor: Computational design, MID1-apo1
Authors:Der, B.S, Machius, M, Miley, M.J, Kuhlman, B.
Deposit date:2011-12-09
Release date:2012-01-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer.
J.Am.Chem.Soc., 134, 2012
6TNE
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BU of 6tne by Molmil
Crystal structure of receiver domain from Hybrid Histidine Kinase CckA
Descriptor: Histidine kinase
Authors:Dubey, B.N, Bruederlin, M, Schirmer, T.
Deposit date:2019-12-06
Release date:2020-12-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of receiver domain from cyclic-di-GMP controlled hybrid histidine kinase
to be published
1IWV
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BU of 1iwv by Molmil
Crystal Structure Analysis of Human lysozyme at 147K.
Descriptor: CHLORIDE ION, LYSOZYME C
Authors:Joti, Y, Nakasako, M, Kidera, A, Go, N.
Deposit date:2002-06-03
Release date:2002-09-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Nonlinear temperature dependence of the crystal structure of lysozyme: correlation between coordinate shifts and thermal factors.
Acta Crystallogr.,Sect.D, 58, 2002
3V1E
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BU of 3v1e by Molmil
Crystal structure of de novo designed MID1-zinc H12E mutant
Descriptor: Computational design, MID1-zinc H12E mutant, ZINC ION
Authors:Der, B.S, Machius, M, Miley, M.J, Kuhlman, B.
Deposit date:2011-12-09
Release date:2012-01-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.073 Å)
Cite:Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer.
J.Am.Chem.Soc., 134, 2012
3EOQ
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BU of 3eoq by Molmil
The crystal structure of putative zinc protease beta-subunit from Thermus thermophilus HB8
Descriptor: Putative zinc protease
Authors:Ohtsuka, J, Ichihara, Y, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
Deposit date:2008-09-29
Release date:2009-03-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of TTHA1264, a putative M16-family zinc peptidase from Thermus thermophilus HB8 that is homologous to the beta subunit of mitochondrial processing peptidase.
Proteins, 2009
4LB6
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BU of 4lb6 by Molmil
Crystal structure of PKZ Zalpha in complex with ds(CG)6 (tetragonal form)
Descriptor: 5'-D(*TP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*G)-3', Protein kinase containing Z-DNA binding domains
Authors:De Rosa, M, Zacarias, S, Athanasiadis, A.
Deposit date:2013-06-20
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for Z-DNA binding and stabilization by the zebrafish Z-DNA dependent protein kinase PKZ.
Nucleic Acids Res., 41, 2013
3RAN
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BU of 3ran by Molmil
CANINE GDP-RAN Q69L MUTANT
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PROTEIN (GTP-BINDING NUCLEAR PROTEIN RAN)
Authors:Stewart, M, Kent, H.M, Mccoy, A.J.
Deposit date:1998-10-19
Release date:1998-12-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The structure of the Q69L mutant of GDP-Ran shows a major conformational change in the switch II loop that accounts for its failure to bind nuclear transport factor 2 (NTF2).
J.Mol.Biol., 284, 1998
6TOW
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BU of 6tow by Molmil
Structure of E70A mutant of Rex8A from Paenibacillus barcinonensis complexed with xylotetraose.
Descriptor: Reducing-end xylose-releasing exo-oligoxylanase Rex8A, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Jimenez-Ortega, E, Ramirez-Escudero, M, Sanz-Aparicio, J.
Deposit date:2019-12-12
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural analysis of the reducing-end xylose-releasing exo-oligoxylanase Rex8A from Paenibacillus barcinonensis BP-23 deciphers its molecular specificity.
Febs J., 287, 2020
1IO6
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BU of 1io6 by Molmil
GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 (GRB2) C-TERMINAL SH3 DOMAIN COMPLEXED WITH A LIGAND PEPTIDE (NMR, MINIMIZED MEAN STRUCTURE)
Descriptor: A LIGAND PEPTIDE, GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
Authors:Kawasaki, M, Ogura, K, Hatanaka, H, Inagaki, F.
Deposit date:2001-01-25
Release date:2001-02-14
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of the C-Terminal SH3 Domain of Grb2 Complexed with a Ligand Peptide: A Ligand Exchange Model of the SH3 Domain
To be Published
3R3T
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BU of 3r3t by Molmil
Crystal Structure of 30S Ribosomal Protein S from Bacillus anthracis
Descriptor: 30S ribosomal protein S6, CALCIUM ION, GLYCEROL, ...
Authors:Kim, Y, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-03-16
Release date:2011-03-30
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Crystal Structure of 30S Ribosomal Protein S from Bacillus anthracis
To be Published
4MQE
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BU of 4mqe by Molmil
Crystal structure of the extracellular domain of human GABA(B) receptor in the apo form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid type B receptor subunit 1, Gamma-aminobutyric acid type B receptor subunit 2, ...
Authors:Geng, Y, Bush, M, Mosyak, L, Wang, F, Fan, Q.R.
Deposit date:2013-09-16
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural mechanism of ligand activation in human GABA(B) receptor.
Nature, 504, 2013
6TP8
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BU of 6tp8 by Molmil
Substrate protein interactions in the limbus region of the catalytic site of Candida antarctica Lipase B
Descriptor: 2,3-di(butanoyloxy)propyl butanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DIETHYL PHOSPHONATE, ...
Authors:Cianci, M, Silvestrini, L.
Deposit date:2019-12-12
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Principles of lipid-enzyme interactions in the limbus region of the catalytic site of Candida antarctica Lipase B.
Int.J.Biol.Macromol., 158, 2020

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