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PDB: 51964 results

6GGS
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BU of 6ggs by Molmil
Structure of RIP2 CARD filament
Descriptor: Receptor-interacting serine/threonine-protein kinase 2
Authors:Pellegrini, E, Cusack, S, Desfosses, A, Schoehn, G, Malet, H, Gutsche, I, Sachse, C, Hons, M.
Deposit date:2018-05-03
Release date:2018-10-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.94 Å)
Cite:RIP2 filament formation is required for NOD2 dependent NF-kappa B signalling.
Nat Commun, 9, 2018
4KTR
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Crystal structure of 2-O-alpha-glucosylglycerol phosphorylase in complex with isofagomine and glycerol
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ...
Authors:Touhara, K.K, Nihira, T, Kitaoka, M, Nakai, H, Fushinobu, S.
Deposit date:2013-05-21
Release date:2014-05-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for reversible phosphorolysis and hydrolysis reactions of 2-O-alpha-glucosylglycerol phosphorylase
J.Biol.Chem., 289, 2014
6H28
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BU of 6h28 by Molmil
Structure of S70A BlaC from Mycobacterium tuberculosis obtained from crystals produced in the absence of DTT
Descriptor: Beta-lactamase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Tassoni, R, Pannu, N.S, Ubbink, M.
Deposit date:2018-07-13
Release date:2019-01-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:New Conformations of Acylation Adducts of Inhibitors of beta-Lactamase from Mycobacterium tuberculosis.
Biochemistry, 58, 2019
6GG5
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BU of 6gg5 by Molmil
Crystal structure of M2 PYK in complex with Tryptophan.
Descriptor: PHOSPHATE ION, POTASSIUM ION, Pyruvate kinase PKM, ...
Authors:McNae, I.W, Yuan, M, Walkinshaw, M.D.
Deposit date:2018-05-02
Release date:2018-05-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor.
Biochem. J., 475, 2018
6GHH
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BU of 6ghh by Molmil
Thermodynamic, Crystallographic and Computational Studies of Non Mammalian Fatty Acid Binding to Bovine b-Lactoglobulin
Descriptor: Beta-lactoglobulin, N-TRIDECANOIC ACID
Authors:Kontopidis, G, Rovoli, M.
Deposit date:2018-05-07
Release date:2018-06-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Thermodynamic, crystallographic and computational studies of non-mammalian fatty acid binding to bovine beta-Lactoglobulin.
Int. J. Biol. Macromol., 118, 2018
3NPC
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BU of 3npc by Molmil
Crystal structure of JNK2 complexed with BIRB796
Descriptor: 1-(5-TERT-BUTYL-2-P-TOLYL-2H-PYRAZOL-3-YL)-3-[4-(2-MORPHOLIN-4-YL-ETHOXY)-NAPHTHALEN-1-YL]-UREA, Mitogen-activated protein kinase 9
Authors:Kuglstatter, A, Ghate, M.
Deposit date:2010-06-28
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:X-ray crystal structure of JNK2 complexed with the p38alpha inhibitor BIRB796: Insights into the rational design of DFG-out binding MAP kinase inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
1JBA
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BU of 1jba by Molmil
UNMYRISTOYLATED GCAP-2 WITH THREE CALCIUM IONS BOUND
Descriptor: CALCIUM ION, PROTEIN (GUANYLATE CYCLASE ACTIVATING PROTEIN 2)
Authors:Ames, J.B, Dizhoor, A.M, Ikura, M, Palczewski, K, Stryer, L.
Deposit date:1999-04-03
Release date:1999-12-10
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Three-dimensional structure of guanylyl cyclase activating protein-2, a calcium-sensitive modulator of photoreceptor guanylyl cyclases.
J.Biol.Chem., 274, 1999
1JI4
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BU of 1ji4 by Molmil
NAP protein from helicobacter pylori
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FE (III) ION, NEUTROPHIL-ACTIVATING PROTEIN A, ...
Authors:Zanotti, G, Papinutto, E, Dundon, W.G, Battistutta, R, Seveso, M, Del Giudice, G, Rappuoli, R, Montecucco, C.
Deposit date:2001-06-29
Release date:2002-10-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structure of the Neutrophil-activating Protein from Helicobacter pylori
J.Mol.Biol., 323, 2002
6H53
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Crystal structure of Mycobacterium tuberculosis phosphatidylinositol phosphate synthase (PgsA1) in apo form
Descriptor: CDP-diacylglycerol--inositol 3-phosphatidyltransferase, SULFATE ION, UNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID
Authors:Grave, K, Hogbom, M.
Deposit date:2018-07-23
Release date:2019-05-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure ofMycobacterium tuberculosisphosphatidylinositol phosphate synthase reveals mechanism of substrate binding and metal catalysis.
Commun Biol, 2, 2019
4ORF
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BU of 4orf by Molmil
cAMP-binding acyltransferase from Mycobacterium smegmatis, mutant R95K
Descriptor: Acetyltransferase Pat, CHLORIDE ION
Authors:Podobnik, M, Rebolj, K, Visweswariah, S.S.
Deposit date:2014-02-11
Release date:2014-04-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Allostery and Conformational Dynamics in cAMP-binding Acyltransferases.
J.Biol.Chem., 289, 2014
3DTA
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BU of 3dta by Molmil
E(L212)Q, N(M44)D double mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-14
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Restoring proton transfer in L212Q mutant of photosynthetic reaction center
To be Published
4ORN
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BU of 4orn by Molmil
Blue Fluorescent Protein mKalama1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, SULFATE ION, ...
Authors:Vegh, R.B, Bloch, D.A, Bommarius, A.S, Verkhovsky, M, Pletnev, S, Iwai, H, Bochenkova, A.V, Solntsev, K.M.
Deposit date:2014-02-11
Release date:2015-02-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Hidden photoinduced reactivity of the blue fluorescent protein mKalama1.
Phys Chem Chem Phys, 17, 2015
4KAE
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BU of 4kae by Molmil
Crystal structure of Maleylacetoacetate isomerase from Anaeromyxobacter dehalogenans 2CP-1, TARGET EFI-507175, with bound dicarboxyethyl glutathione and citrate in the active site
Descriptor: CITRIC ACID, GAMMA-GLUTAMYL-S-(1,2-DICARBOXYETHYL)CYSTEINYLGLYCINE, GLYCEROL, ...
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Stead, M, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-04-22
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Maleylacetoacetate isomerase from Anaeromyxobacter dehalogenans 2CP-1, TARGET EFI-507175, with bound dicarboxyethyl glutathione and citrate in the active site
To be Published
6GXC
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BU of 6gxc by Molmil
Bacterial oligosaccharyltransferase PglB in complex with an inhibitory peptide and a reactive lipid-linked oligosaccharide analog
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLY-ASP-GLN-DAB-ALA-THR-PPN-GLY, ...
Authors:Napiorkowska, M, Locher, K.P, Boilevin, J, Darbre, T, Reymond, J.-L.
Deposit date:2018-06-27
Release date:2018-11-14
Method:X-RAY DIFFRACTION (3.401 Å)
Cite:Structure of bacterial oligosaccharyltransferase PglB bound to a reactive LLO and an inhibitory peptide.
Sci Rep, 8, 2018
1JK3
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BU of 1jk3 by Molmil
Crystal structure of human MMP-12 (Macrophage Elastase) at true atomic resolution
Descriptor: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, CALCIUM ION, MACROPHAGE METALLOELASTASE, ...
Authors:Lang, R, Kocourek, A, Braun, M, Tschesche, H, Huber, R, Bode, W, Maskos, K.
Deposit date:2001-07-11
Release date:2001-09-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Substrate specificity determinants of human macrophage elastase (MMP-12) based on the 1.1 A crystal structure.
J.Mol.Biol., 312, 2001
4KBB
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BU of 4kbb by Molmil
Structure of Botulinum neurotoxin B binding domain in complex with both synaptotagmin II and GD1a
Descriptor: Botulinum neurotoxin type B, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Berntsson, R.P.A, Peng, L, Dong, M, Stenmark, P.
Deposit date:2013-04-23
Release date:2013-07-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of dual receptor binding to botulinum neurotoxin B.
Nat Commun, 4, 2013
3E18
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BU of 3e18 by Molmil
CRYSTAL STRUCTURE OF NAD-BINDING PROTEIN FROM Listeria innocua
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Rutter, M, Hu, S, Groshong, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-08-02
Release date:2008-08-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:CRYSTAL STRUCTURE OF NAD-BINDING PROTEIN FROM Listeria innocua
To be Published
4FMU
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BU of 4fmu by Molmil
Crystal structure of Methyltransferase domain of human SET domain-containing protein 2 Compound: Pr-SNF
Descriptor: (2S,5S)-2-amino-6-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-5-(propylamino)hexanoic acid, Histone-lysine N-methyltransferase SETD2, UNKNOWN ATOM OR ION, ...
Authors:Dong, A, Zeng, H, Ibanez, G, Zheng, W, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Luo, M, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2012-06-18
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Sinefungin Derivatives as Inhibitors and Structure Probes of Protein Lysine Methyltransferase SETD2.
J.Am.Chem.Soc., 134, 2012
4OGP
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BU of 4ogp by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator (Space group : P21)
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA topoisomerase 2-associated protein PAT1
Authors:Fourati-Kammoun, Z, Kolesnikova, O, Back, R, Keller, J, Lazar, N, Gaudon-Plesse, C, Seraphin, B, Graille, M.
Deposit date:2014-01-16
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The C-terminal domain from S. cerevisiae Pat1 displays two conserved regions involved in decapping factor recruitment.
Plos One, 9, 2014
3E1X
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BU of 3e1x by Molmil
The Crystal Structure of Apo Prostasin at 1.7 Angstroms Resolution
Descriptor: GLYCEROL, Prostasin
Authors:Spraggon, G, Hornsby, M, Shipway, A, Harris, J.L, Lesley, S.A.
Deposit date:2008-08-04
Release date:2009-05-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Active site conformational changes of prostasin provide a new mechanism of protease regulation by divalent cations.
Protein Sci., 18, 2009
4OH0
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BU of 4oh0 by Molmil
Crystal structure of OXA-58 carbapenemase
Descriptor: Beta-lactamase OXA-58, CHLORIDE ION
Authors:Smith, C.A, Antunes, N.T, Toth, M, Vakulenko, S.B.
Deposit date:2014-01-16
Release date:2014-02-26
Last modified:2014-04-02
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of Carbapenemase OXA-58 from Acinetobacter baumannii.
Antimicrob.Agents Chemother., 58, 2014
3NWN
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BU of 3nwn by Molmil
Crystal structure of the human KIF9 motor domain in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Kinesin-like protein KIF9, ...
Authors:Zhu, H, Tempel, W, He, H, Shen, Y, Wang, J, Brothers, G, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-07-09
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the human KIF9 motor domain in complex with ADP
To be Published
6GZF
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BU of 6gzf by Molmil
Xi Class GST from Natrialba magadii
Descriptor: Glutathione S-transferase, SULFATE ION
Authors:Di Matteo, A, Federici, L, Masulli, M, Carletti, E, Cassidy, J, Paradisi, F, Di Ilio, C, Allocati, N.
Deposit date:2018-07-04
Release date:2019-02-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.614 Å)
Cite:Structural Characterization of the Xi Class Glutathione Transferase From the Haloalkaliphilic ArchaeonNatrialba magadii.
Front Microbiol, 10, 2019
4KEV
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BU of 4kev by Molmil
Crystal structure of SsoPox W263L
Descriptor: Aryldialkylphosphatase, COBALT (II) ION, FE (II) ION
Authors:Gotthard, G, Hiblot, J, Chabriere, E, Elias, M.
Deposit date:2013-04-26
Release date:2013-10-02
Last modified:2013-11-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Differential Active Site Loop Conformations Mediate Promiscuous Activities in the Lactonase SsoPox.
Plos One, 8, 2013
6GND
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BU of 6gnd by Molmil
Crystal structure of the complex of a Ferredoxin-Flavin Thioredoxin Reductase and a Thioredoxin from Clostridium acetobutylicum at 2.9 A resolution
Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin, ...
Authors:Buey, R.M, Fernandez-Justel, D, Balsera, M.
Deposit date:2018-05-30
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.889 Å)
Cite:Ferredoxin-linked flavoenzyme defines a family of pyridine nucleotide-independent thioredoxin reductases.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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