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PDB: 52259 results

5VAI
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BU of 5vai by Molmil
Cryo-EM structure of the activated Glucagon-like peptide-1 receptor in complex with G protein
Descriptor: Glucagon-like peptide 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhang, Y, Sun, B, Feng, D, Hu, H, Chu, M, Qu, Q, Tarrasch, J.T, Li, S, Kobilka, T.S, Kobilka, B.K, Skiniotis, G.
Deposit date:2017-03-27
Release date:2017-05-24
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of the activated GLP-1 receptor in complex with a G protein.
Nature, 546, 2017
1KFW
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BU of 1kfw by Molmil
Structure of catalytic domain of psychrophilic chitinase B from Arthrobacter TAD20
Descriptor: GLYCEROL, chitinase B
Authors:Ayati, M, Mandelman, D, Aghajari, N, Haser, R.
Deposit date:2001-11-23
Release date:2002-11-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structure of catalytical domain of psychrophilic chitinase from Arthobacter, with and without allosamidine
To be Published
1TRY
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BU of 1try by Molmil
STRUCTURE OF INHIBITED TRYPSIN FROM FUSARIUM OXYSPORUM AT 1.55 ANGSTROMS
Descriptor: ISOPROPYL ALCOHOL, PHOSPHORYLISOPROPANE, TRYPSIN
Authors:Rypniewski, W.R, Dambmann, C, Von Der Osten, C, Dauter, M, Wilson, K.S.
Deposit date:1994-03-07
Release date:1996-01-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of inhibited trypsin from Fusarium oxysporum at 1.55 A.
Acta Crystallogr.,Sect.D, 51, 1995
1KJP
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BU of 1kjp by Molmil
Thermolysin complexed with Z-L-Glutamic acid (benzyloxycarbonyl-L-Glutamic acid)
Descriptor: CALCIUM ION, GLUTAMIC ACID, Thermolysin, ...
Authors:Senda, M, Senda, T, Kidokoro, S.
Deposit date:2001-12-05
Release date:2002-12-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure analyses of thermolysin in complex with its inhibitors
To be Published
1KGL
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BU of 1kgl by Molmil
Solution structure of cellular retinol binding protein type-I in complex with all-trans-retinol
Descriptor: CELLULAR RETINOL-BINDING PROTEIN TYPE I, RETINOL
Authors:Franzoni, L, Luecke, C, Perez, C, Cavazzini, D, Rademacher, M, Ludwig, C, Spisni, A, Rossi, G.L, Rueterjans, H.
Deposit date:2001-11-27
Release date:2002-06-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and Backbone Dynamics of Apo- and Holo-cellular Retinol-binding Protein in Solution.
J.Biol.Chem., 277, 2002
7FJH
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BU of 7fjh by Molmil
LecA from Pseudomonas aeruginosa in complex with 4-Phenylbutyryl hydroxamic acid (CAS: 32153-46-1)
Descriptor: CALCIUM ION, N-oxidanyl-4-phenyl-butanamide, PA-I galactophilic lectin
Authors:Shanina, S, Kuhaudomlarp, S, Siebs, E, Fuchsberger, F, Denis, M, da Silva Figueiredo Celstino Gomes, P, Clausen, M.H, Seeberger, P.H, Rognan, D, Titz, A, Imberty, A, Rademacher, C.
Deposit date:2021-08-04
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Targeting undruggable carbohydrate recognition sites through focused fragment library design.
Commun Chem, 5, 2022
1KK6
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BU of 1kk6 by Molmil
Crystal Structure of Vat(D) (Form I)
Descriptor: STREPTOGRAMIN A ACETYLTRANSFERASE
Authors:Sugantino, M, Roderick, S.L.
Deposit date:2001-12-06
Release date:2002-02-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Vat(D): an acetyltransferase that inactivates streptogramin group A antibiotics.
Biochemistry, 41, 2002
5V2V
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BU of 5v2v by Molmil
Ethylene forming enzyme in complex with nickel
Descriptor: 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, NICKEL (II) ION
Authors:Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
Deposit date:2017-03-06
Release date:2017-08-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
2XPL
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BU of 2xpl by Molmil
Crystal structure of Iws1(Spn1) conserved domain from Encephalitozoon cuniculi
Descriptor: CHLORIDE ION, IWS1
Authors:Koch, M, Diebold, M.-L, Cura, V, Cavarelli, J, Romier, C.
Deposit date:2010-08-27
Release date:2010-11-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Structure of an Iws1/Spt6 Complex Reveals an Interaction Domain Conserved in Tfiis, Elongin a and Med26
Embo J., 29, 2010
5V2Y
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BU of 5v2y by Molmil
Ethylene forming enzyme in complex with manganese, 2-oxoglutarate and L-arginine
Descriptor: 2-OXOGLUTARIC ACID, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, ARGININE, ...
Authors:Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
Deposit date:2017-03-06
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.428 Å)
Cite:Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
5UTO
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BU of 5uto by Molmil
The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with palmitic acid to 1.83 Angstrom resolution
Descriptor: EDD domain protein, DegV family, PALMITIC ACID
Authors:Cuypers, M.G, Ericson, M, Subramanian, C, Broussard, T.C, Miller, D.J, White, S.W, Rock, C.O.
Deposit date:2017-02-15
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with palmitic acid to 1.83 Angstroem resolution
J.Biol.Chem., 2018
7F4B
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BU of 7f4b by Molmil
The crystal structure of the immature apo-enzyme of homoserine dehydrogenase from the hyperthermophilic archaeon Sulfurisphaera tokodaii.
Descriptor: MAGNESIUM ION, homoserine dehydrogenase
Authors:Kurihara, E, Kubota, T, Watanabe, K, Ogata, K, Kaneko, R, Oshima, T, Yoshimune, K, Goto, M.
Deposit date:2021-06-18
Release date:2022-06-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase.
Commun Biol, 5, 2022
1KMZ
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BU of 1kmz by Molmil
MOLECULAR BASIS OF MITOMYCIN C RESICTANCE IN STREPTOMYCES: CRYSTAL STRUCTURES OF THE MRD PROTEIN WITH AND WITHOUT A DRUG DERIVATIVE
Descriptor: mitomycin-binding protein
Authors:Martin, T.W, Dauter, Z, Devedjiev, Y, Sheffield, P, Jelen, F, He, M, Sherman, D, Otlewski, J, Derewenda, Z.S, Derewenda, U.
Deposit date:2001-12-17
Release date:2002-07-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular basis of mitomycin C resistance in streptomyces: structure and function of the MRD protein.
Structure, 10, 2002
1KQQ
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BU of 1kqq by Molmil
Solution Structure of the Dead ringer ARID-DNA Complex
Descriptor: 5'-D(*CP*CP*AP*CP*AP*TP*CP*AP*AP*TP*AP*CP*AP*GP*G)-3', 5'-D(*CP*CP*TP*GP*TP*AP*TP*TP*GP*AP*TP*GP*TP*GP*G)-3', DEAD RINGER PROTEIN
Authors:Iwahara, J, Iwahara, M, Daughdrill, G.W, Ford, J, Clubb, R.T.
Deposit date:2002-01-07
Release date:2002-03-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of the Dead ringer-DNA complex reveals how AT-rich interaction domains (ARIDs) recognize DNA.
EMBO J., 21, 2002
2XD5
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BU of 2xd5 by Molmil
Structural insights into the catalytic mechanism and the role of Streptococcus pneumoniae PBP1b
Descriptor: CHLORIDE ION, N-BENZOYL-D-ALANINE, PENICILLIN-BINDING PROTEIN 1B, ...
Authors:Macheboeuf, P, Lemaire, D, Jamin, M, Dideberg, O, Dessen, A.
Deposit date:2010-04-29
Release date:2010-05-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights Into the Catalytic Mechanism and the Role of Streptococcus Pneumoniae Pbp1B
To be Published
7FFM
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BU of 7ffm by Molmil
Human serum transferrin with five osmium binding sites
Descriptor: MALONATE ION, NITRILOTRIACETIC ACID, OSMIUM ION, ...
Authors:Wang, M, Sun, H.
Deposit date:2021-07-23
Release date:2022-06-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Binding of ruthenium and osmium at non‐iron sites of transferrin accounts for their iron-independent cellular uptake.
J.Inorg.Biochem., 234, 2022
1KN2
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BU of 1kn2 by Molmil
CATALYTIC ANTIBODY D2.3 COMPLEX
Descriptor: IG ANTIBODY D2.3 (HEAVY CHAIN), IG ANTIBODY D2.3 (LIGHT CHAIN), PARA-NITROPHENYL PHOSPHONOBUTANOYL L-ALANINE, ...
Authors:Gigant, B, Knossow, M.
Deposit date:2001-12-18
Release date:2002-03-13
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Remarkable remote chiral recognition in a reaction mediated by a catalytic antibody.
J.Am.Chem.Soc., 124, 2002
5UZ8
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BU of 5uz8 by Molmil
Crystal Structure of Mouse Cadherin-23 EC22-24
Descriptor: CALCIUM ION, CHLORIDE ION, Cadherin-23, ...
Authors:Patel, A, Jaiganesh, A, Sotomayor, M.
Deposit date:2017-02-25
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 26, 2018
1KW4
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BU of 1kw4 by Molmil
Polyhomeotic SAM domain structure
Descriptor: Polyhomeotic
Authors:Kim, C.A, Gingery, M, M Pilpa, R, Bowie, J.U.
Deposit date:2002-01-28
Release date:2002-06-05
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The SAM domain of polyhomeotic forms a helical polymer.
Nat.Struct.Biol., 9, 2002
7F4Z
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BU of 7f4z by Molmil
X-ray crystal structure of Y149A mutated Hsp72-NBD in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Heat shock 70 kDa protein 1B, ...
Authors:Yokoyama, T, Fujii, S, Nabeshima, Y, Mizuguchi, M.
Deposit date:2021-06-21
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Neutron crystallographic analysis of the nucleotide-binding domain of Hsp72 in complex with ADP.
Iucrj, 9, 2022
2XKR
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BU of 2xkr by Molmil
Crystal Structure of Mycobacterium tuberculosis CYP142: A novel cholesterol oxidase
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, PUTATIVE CYTOCHROME P450 142, TETRAETHYLENE GLYCOL
Authors:Driscoll, M, McLean, K.J, Levy, C.W, Lafite, P, Mast, N, Pikuleva, I.A, Rigby, S.E.J, Leys, D, Munro, A.W.
Deposit date:2010-07-12
Release date:2010-09-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Structural and Biochemical Characterization of Mycobacterium Tuberculosis Cyp142: Evidence for Multiple Cholesterol 27-Hydroxylase Activities in a Human Pathogen.
J.Biol.Chem., 285, 2010
2XT6
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BU of 2xt6 by Molmil
Crystal structure of Mycobacterium smegmatis alpha-ketoglutarate decarboxylase homodimer (orthorhombic form)
Descriptor: 2-OXOGLUTARATE DECARBOXYLASE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wagner, T, Bellinzoni, M, Wehenkel, A.M, O'Hare, H.M, Alzari, P.M.
Deposit date:2010-10-05
Release date:2011-06-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Functional Plasticity and Allosteric Regulation of Alpha-Ketoglutarate Decarboxylase in Central Mycobacterial Metabolism.
Chem.Biol., 18, 2011
5V11
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BU of 5v11 by Molmil
Solution structure of arenicin-3 synthetic analog.
Descriptor: AA139
Authors:Edwards, I.A, Mobli, M.
Deposit date:2017-03-01
Release date:2018-08-08
Last modified:2020-01-08
Method:SOLUTION NMR
Cite:Elucidating the Lipid Binding Properties of Membrane-Active Peptides Using Cyclised Nanodiscs.
Front Chem, 7, 2019
7F4C
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BU of 7f4c by Molmil
The crystal structure of the immature holo-enzyme of homoserine dehydrogenase complexed with NADP and 1,4-butandiol from the hyperthermophilic archaeon Sulfurisphaera tokodaii.
Descriptor: 1,4-BUTANEDIOL, Homoserine dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ogata, K, Kaneko, R, Kubota, T, Watanabe, K, Kurihara, E, Oshima, T, Yoshimune, K, Goto, M.
Deposit date:2021-06-18
Release date:2022-06-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase.
Commun Biol, 5, 2022
7F47
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BU of 7f47 by Molmil
Cryo-EM structure of Rhizobium etli MprF
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Hypothetical conserved protein, [(2R)-1-[[(2R)-3-[(2S)-2,6-bis(azanyl)hexanoyl]oxy-2-oxidanyl-propoxy]-oxidanyl-phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (E)-octadec-9-enoate
Authors:Nishimura, M, Hirano, H, Kobayashi, K, Gill, C.P, Phan, C.N.K, Kise, Y, Kusakizako, T, Yamashita, K, Ito, Y, Roy, H, Nishizawa, T, Nureki, O.
Deposit date:2021-06-17
Release date:2022-06-22
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Cryo-EM structure of Rhizobium etli MprF
To Be Published

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