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PDB: 51964 results

5IOY
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Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with N-(cyclopentylmethyl)pyrrolidine-1-carboxamide at 1.77A resolution
Descriptor: N-(cyclopentylmethyl)pyrrolidine-1-carboxamide, SULFATE ION, TetR-family transcriptional regulatory repressor protein
Authors:Blaszczyk, M, Surade, S, Nikiforov, P.O, Abell, C, Blundell, T.L.
Deposit date:2016-03-09
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Fragment-Sized EthR Inhibitors Exhibit Exceptionally Strong Ethionamide Boosting Effect in Whole-Cell Mycobacterium tuberculosis Assays.
ACS Chem. Biol., 12, 2017
5F7G
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BU of 5f7g by Molmil
Crystal structure of the Q108K:K40L:T51V:R58Y:Y19W:Q38L mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal at 1.48 Angstrom Resolution
Descriptor: ACETATE ION, RETINAL, Retinol-binding protein 2
Authors:Nosrati, M, Nossoni, Z, Geiger, J.H.
Deposit date:2015-12-08
Release date:2016-12-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal structure of the Q108K:K40L:T51V:R58F mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.54 Angstrom Resolution
To Be Published
6XCQ
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BU of 6xcq by Molmil
Erythromycin esterase EreC, mutant H289N in its closed conformation
Descriptor: EreC, S-1,2-PROPANEDIOL
Authors:Zielinski, M, Park, J, Berghuis, A.M.
Deposit date:2020-06-09
Release date:2021-02-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional insights into esterase-mediated macrolide resistance.
Nat Commun, 12, 2021
5IPA
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BU of 5ipa by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with (E)-3-(furan-3-yl)-1-(pyrrolidin-1-yl)prop-2-en-1-one at 1.78A resolution
Descriptor: (2E)-3-(furan-3-yl)-1-(pyrrolidin-1-yl)prop-2-en-1-one, TetR-family transcriptional regulatory repressor protein
Authors:Blaszczyk, M, Surade, S, Nikiforov, P.O, Abell, C, Blundell, T.L.
Deposit date:2016-03-09
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Fragment-Sized EthR Inhibitors Exhibit Exceptionally Strong Ethionamide Boosting Effect in Whole-Cell Mycobacterium tuberculosis Assays.
ACS Chem. Biol., 12, 2017
5EWE
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BU of 5ewe by Molmil
Ternary complex of human DNA polymerase eta inserting rCTP opposite template G
Descriptor: CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
Authors:Su, Y, Egli, M, Guengerich, F.P.
Deposit date:2015-11-20
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Mechanism of Ribonucleotide Incorporation by Human DNA Polymerase eta.
J.Biol.Chem., 291, 2016
5EWP
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BU of 5ewp by Molmil
ARO (armadillo repeats only protein) from Plasmodium falciparum
Descriptor: ARO (armadillo repeats only protein)
Authors:Brown, C, Zhang, K, Emery, J, Prusty, D, Wetzel, J, Heincke, D, Gilberger, T, Junop, M.
Deposit date:2015-11-20
Release date:2016-01-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:ARO (armadillo repeats only protein) from Plasmodium falciparum
To Be Published
2YYS
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BU of 2yys by Molmil
Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8
Descriptor: GLYCEROL, Proline iminopeptidase-related protein
Authors:Okai, M, Miyauchi, Y, Ebihara, A, Lee, W.C, Nagata, K, Tanokura, M.
Deposit date:2007-05-01
Release date:2008-02-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8
Proteins, 70, 2008
5I8D
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BU of 5i8d by Molmil
Crystal Structure of Mouse Cadherin-23 EC19-21 S2064P
Descriptor: CALCIUM ION, Cadherin-23
Authors:Jaiganesh, A, Sotomayor, M.
Deposit date:2016-02-18
Release date:2017-08-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 2018
2Z0L
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BU of 2z0l by Molmil
Crystal structure of EBV-DNA polymerase accessory protein BMRF1
Descriptor: CHLORIDE ION, Early antigen protein D
Authors:Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of Epstein-Barr virus DNA polymerase processivity factor BMRF1
J.Biol.Chem., 284, 2009
5I14
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BU of 5i14 by Molmil
Truncated and mutated T4 lysozyme
Descriptor: NICKEL (II) ION, mutated and truncated T4 lysozyme
Authors:Klima, M, Boura, E.
Deposit date:2016-02-05
Release date:2016-02-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.745 Å)
Cite:Metal ions-binding T4 lysozyme as an intramolecular protein purification tag compatible with X-ray crystallography.
Protein Sci., 26, 2017
2YQE
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BU of 2yqe by Molmil
Solution structure of the ARID domain of JARID1D protein
Descriptor: Jumonji/ARID domain-containing protein 1D
Authors:Tanabe, W, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2008-04-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the ARID domain of JARID1D protein
To be Published
5F6K
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BU of 5f6k by Molmil
Crystal structure of the MLL3-Ash2L-RbBP5 complex
Descriptor: Histone-lysine N-methyltransferase 2C, Retinoblastoma-binding protein 5, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Li, Y, Lei, M, Chen, Y.
Deposit date:2015-12-06
Release date:2016-02-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.411 Å)
Cite:Structural basis for activity regulation of MLL family methyltransferases.
Nature, 530, 2016
2Y7D
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BU of 2y7d by Molmil
Crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme (Kce) from Candidatus Cloacamonas acidaminovorans (orthorombic form)
Descriptor: 3-KETO-5-AMINOHEXANOATE CLEAVAGE ENZYME, GLYCEROL, ZINC ION
Authors:Bellinzoni, M, Alzari, P.M.
Deposit date:2011-01-31
Release date:2011-06-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:3-Keto-5-Aminohexanoate Cleavage Enzyme: A Common Fold for an Uncommon Claisen-Type Condensation.
J.Biol.Chem., 286, 2011
5EZK
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BU of 5ezk by Molmil
RNA polymerase model placed by Molecular replacement into X-ray diffraction map of DNA-bound RNA Polymerase-Sigma 54 holoenzyme complex.
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Darbari, V.C, Yang, Y, Lu, D, Zhang, N, Glyde, R, Wang, Y, Murakami, K.S, Buck, M, Zhang, X.
Deposit date:2015-11-26
Release date:2015-12-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (8.5 Å)
Cite:TRANSCRIPTION. Structures of the RNA polymerase- Sigma 54 reveal new and conserved regulatory strategies.
Science, 349, 2015
5OVL
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BU of 5ovl by Molmil
crystal structure of MabA bound to NADP+ from M. smegmatis
Descriptor: 3-oxoacyl-[acyl-carrier-protein] reductase FabG, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Kussau, T, Van Wyk, N, Viljoen, A, Olieric, V, Flipo, M, Kremer, L, Blaise, M.
Deposit date:2017-08-29
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural rearrangements occurring upon cofactor binding in the Mycobacterium smegmatis beta-ketoacyl-acyl carrier protein reductase MabA.
Acta Crystallogr D Struct Biol, 74, 2018
6XCS
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BU of 6xcs by Molmil
Erythromycin esterase mutant EreC H289N in its open conformation
Descriptor: EreC
Authors:Zielinski, M, Berghuis, A.M.
Deposit date:2020-06-09
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and functional insights into esterase-mediated macrolide resistance.
Nat Commun, 12, 2021
2Y6C
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BU of 2y6c by Molmil
The Discovery of MMP7 inhibitors Exploiting a Novel Selectivity Trigger
Descriptor: CALCIUM ION, MATRILYSIN, N-{[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]SULFONYL}-L-TRYPTOPHAN, ...
Authors:Edman, K, Furber, M, Hemsley, P, Johansson, C, Pairaudeau, G, Petersen, J, Stocks, M, Tervo, A, Ward, A, Wells, E, Wissler, L.
Deposit date:2011-01-20
Release date:2011-05-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Discovery of Mmp7 Inhibitors Exploiting a Novel Selectivity Trigger.
Chemmedchem, 6, 2011
2Y9M
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BU of 2y9m by Molmil
Pex4p-Pex22p structure
Descriptor: 1,2-ETHANEDIOL, PEROXISOME ASSEMBLY PROTEIN 22, UBIQUITIN-CONJUGATING ENZYME E2-21 KDA
Authors:Williams, C, van den Berg, M, Panjikar, S, Distel, B, Wilmanns, M.
Deposit date:2011-02-15
Release date:2011-10-26
Last modified:2017-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights Into Ubiquitin-Conjugating Enzyme/ Co-Activator Interactions from the Structure of the Pex4P:Pex22P Complex.
Embo J., 31, 2011
4I8H
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BU of 4i8h by Molmil
Bovine trypsin at 0.75 resolution
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Dauter, Z, Liebschner, D, Dauter, M, Brzuszkiewicz, A.
Deposit date:2012-12-03
Release date:2012-12-19
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (0.75 Å)
Cite:On the reproducibility of protein crystal structures: five atomic resolution structures of trypsin.
Acta Crystallogr.,Sect.D, 69, 2013
5IG1
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BU of 5ig1 by Molmil
Crystal structure of S. rosetta CaMKII kinase domain
Descriptor: CAMK/CAMK2 protein kinase, PHOSPHATE ION
Authors:Bhattacharyya, M, Gee, C.L, Barros, T, Kuriyan, J.
Deposit date:2016-02-26
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular mechanism of activation-triggered subunit exchange in Ca(2+)/calmodulin-dependent protein kinase II.
Elife, 5, 2016
1ICY
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BU of 1icy by Molmil
[ALA31,PRO32]-PNPY BOUND TO DPC MICELLES
Descriptor: NEUROPEPTIDE Y
Authors:Bader, R, Rytz, G, Lerch, M, Beck-Sickinger, A.G, Zerbe, O.
Deposit date:2001-04-02
Release date:2002-05-08
Last modified:2021-10-27
Method:SOLUTION NMR
Cite:Key motif to gain selectivity at the neuropeptide Y5-receptor: structure and dynamics of micelle-bound [Ala31, Pro32]-NPY.
Biochemistry, 41, 2002
5F38
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BU of 5f38 by Molmil
X-ray crystal structure of a thiolase from Escherichia coli at 1.8 A resolution
Descriptor: 1,2-ETHANEDIOL, Acetyl-CoA acetyltransferase, COENZYME A, ...
Authors:Ithayaraja, M, Neelanjana, J, Wierenga, R, Savithri, H.S, Murthy, M.R.N.
Deposit date:2015-12-02
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a thiolase from Escherichia coli at 1.8 angstrom resolution.
Acta Crystallogr.,Sect.F, 72, 2016
2YLY
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Sulfonamides as selective Estrogen Receptor beta Agonists.
Descriptor: ESTROGEN RECEPTOR BETA, N-cyclopropyl-4-oxidanyl-N-[(2R)-2-oxidanyl-2-phenyl-propyl]benzenesulfonamide, SULFATE ION
Authors:Roberts, L.R, Armour, D, Barker, C, Bazin, R, Bess, K, Brown, A, Favor, D, Ellis, D, MacKenny, M, Pullen, N, Stennett, A, Strand, L, Styles, M, Phillips, C.
Deposit date:2011-06-06
Release date:2012-06-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Sulfonamides as Selective Oestrogen Receptor Beta Agonists.
Bioorg.Med.Chem.Lett., 21, 2011
7RLR
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BU of 7rlr by Molmil
Crystal Structure of K83A Mutant of Class D beta-lactamase from Clostridium difficile 630
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Beta-lactamase, ...
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Rosas-Lemus, M, Jedrzejczak, R, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-26
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal Structure of K83A Mutant of Class D beta-lactamase from Clostridium difficile 630
To Be Published
5OXT
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BU of 5oxt by Molmil
DIRECT-EVOLUTIONED UNSPECIFIC PEROXYGENASE FROM AGROCYBE AEGERITA, IN COMPLEX WITH ACETATE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CHLORIDE ION, ...
Authors:Ramirez-Escudero, M, Sanz-Aparicio, J.
Deposit date:2017-09-07
Release date:2019-04-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural Insights into the Substrate Promiscuity of a Laboratory-Evolved Peroxygenase.
Acs Chem.Biol., 13, 2018

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