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PDB: 133 results

4AM3
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BU of 4am3 by Molmil
Crystal structure of C. crescentus PNPase bound to RNA
Descriptor: PHOSPHATE ION, POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE, RNA, ...
Authors:Hardwick, S.W, Gubbey, T, Hug, I, Jenal, U, Luisi, B.F.
Deposit date:2012-03-07
Release date:2012-04-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly.
Open Biol., 2, 2012
3GCM
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BU of 3gcm by Molmil
Crystal Structure of E. coli polynucleotide phosphorylase bound to RNA and RNase E
Descriptor: CITRATE ANION, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Nurmohamed, S, Luisi, B.L.
Deposit date:2009-02-22
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Escherichia coli polynucleotide phosphorylase core bound to RNase E, RNA and manganese: implications for catalytic mechanism and RNA degradosome assembly.
J.Mol.Biol., 389, 2009
4AID
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BU of 4aid by Molmil
Crystal structure of C. crescentus PNPase bound to RNase E recognition peptide
Descriptor: PHOSPHATE ION, POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE, RIBONUCLEASE, ...
Authors:Hardwick, S.W, Gubbey, T, Hug, I, Jenal, U, Luisi, B.F.
Deposit date:2012-02-09
Release date:2012-04-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly.
Open Biol., 2, 2012
8CIB
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BU of 8cib by Molmil
Structural and functional analysis of the Pseudomonas aeruginosa PA1677 protein
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Cysteine hydrolase, ...
Authors:Sonnleitner, E, Brear, P, Luisi, B.F, Blasi, U.
Deposit date:2023-02-09
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Catabolite repression control protein antagonist, a novel player in Pseudomonas aeruginosa carbon catabolite repression control.
Front Microbiol, 14, 2023
1W08
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BU of 1w08 by Molmil
STRUCTURE OF T70N HUMAN LYSOZYME
Descriptor: CHLORIDE ION, LYSOZYME
Authors:Johnson, R, Christodoulou, J, Luisi, B, Dumoulin, M, Caddy, G, Alcocer, M, Murtagh, G, Archer, D.B, Dobson, C.M.
Deposit date:2004-06-02
Release date:2004-06-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Rationalising Lysozyme Amyloidosis: Insights from the Structure and Solution Dynamics of T70N Lysozyme.
J.Mol.Biol., 352, 2005
4OXP
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BU of 4oxp by Molmil
X-ray crystal structure of the S1 and 5'-sensor domains of RNase E from Caulobacter crescentus
Descriptor: Ribonuclease E
Authors:Voss, J.E, Luisi, B.F.L, Hardwick, S.W.
Deposit date:2014-02-06
Release date:2014-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular recognition of RhlB and RNase D in the Caulobacter crescentus RNA degradosome.
Nucleic Acids Res., 42, 2014
4AIM
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BU of 4aim by Molmil
Crystal structure of C. crescentus PNPase bound to RNase E recognition peptide
Descriptor: PHOSPHATE ION, POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE, RIBONUCLEASE, ...
Authors:Hardwick, S.W, Gubbey, T, Hug, I, Jenal, U, Luisi, B.F.
Deposit date:2012-02-10
Release date:2012-04-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly.
Open Biol., 2, 2012
7P06
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BU of 7p06 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in outward-facing conformation with ADP-orthovanadate/ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ADP ORTHOVANADATE, MAGNESIUM ION, ...
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
7P05
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BU of 7p05 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP and rhodamine 6G
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Pleiotropic ABC efflux transporter of multiple drugs, ...
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
7P04
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BU of 7p04 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Pleiotropic ABC efflux transporter of multiple drugs
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
6O1L
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BU of 6o1l by Molmil
Architectural principles for Hfq/Crc-mediated regulation of gene expression Hfq-Crc-amiE 2:3:2 complex
Descriptor: Catabolite repression control protein, RNA (5'-R(*AP*AP*AP*AP*AP*UP*AP*AP*CP*AP*AP*CP*AP*AP*GP*AP*GP*G)-3'), RNA-binding protein Hfq
Authors:Pei, X.Y, Dendooven, T, Sonnleitner, E, Chen, S, Blasi, U, Luisi, B.F.
Deposit date:2019-02-20
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Architectural principles for Hfq/Crc-mediated regulation of gene expression.
Elife, 8, 2019
6O1K
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BU of 6o1k by Molmil
Architectural principles for Hfq/Crc-mediated regulation of gene expression. Hfq-Crc-amiE 2:2:2 complex (core complex)
Descriptor: Catabolite repression control protein, RNA (5'-R(*AP*AP*AP*AP*AP*UP*AP*AP*CP*AP*AP*CP*AP*AP*GP*AP*GP*G)-3'), RNA-binding protein Hfq
Authors:Pei, X.Y, Dendooven, T, Sonnleitner, E, Chen, S, Blasi, U, Luisi, B.F.
Deposit date:2019-02-20
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Architectural principles for Hfq/Crc-mediated regulation of gene expression
Elife, 8, 2019
5NC5
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BU of 5nc5 by Molmil
Crystal structure of AcrBZ in complex with antibiotic puromycin
Descriptor: DARPin, DECANE, DODECANE, ...
Authors:Du, D, Luisi, B.
Deposit date:2017-03-03
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
6O1M
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BU of 6o1m by Molmil
Architectural principles for Hfq/Crc-mediated regulation of gene expression. Hfq-Crc-amiE 2:4:2 complex
Descriptor: Catabolite repression control protein, RNA (5'-R(*AP*AP*AP*AP*AP*UP*AP*AP*CP*AP*AP*CP*AP*AP*GP*AP*GP*G)-3'), RNA-binding protein Hfq
Authors:Pei, X.Y, Dendooven, T, Sonnleitner, E, Chen, S, Blasi, U, Luisi, B.F.
Deposit date:2019-02-20
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Architectural principles for Hfq/Crc-mediated regulation of gene expression.
Elife, 8, 2019
5V5S
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BU of 5v5s by Molmil
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Descriptor: Multidrug efflux pump subunit AcrA, Multidrug efflux pump subunit AcrB, Outer membrane protein TolC
Authors:wang, Z, fan, G, Hryc, C.F, Blaza, J.N, Serysheva, I.I, Schmid, M.F, Chiu, W, Luisi, B.F, Du, D.
Deposit date:2017-03-15
Release date:2017-04-19
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
6TPQ
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BU of 6tpq by Molmil
RNase M5 bound to 50S ribosome with precursor 5S rRNA
Descriptor: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C.
Deposit date:2019-12-13
Release date:2020-09-30
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
6TNN
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BU of 6tnn by Molmil
Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
Descriptor: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C.
Deposit date:2019-12-09
Release date:2020-09-30
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
4ATO
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BU of 4ato by Molmil
New insights into the mechanism of bacterial Type III toxin-antitoxin systems: selective toxin inhibition by a non-coding RNA pseudoknot
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, TOXI, TOXN
Authors:Short, F.L, Pei, X.Y, Blower, T.R, Ong, S.L, Luisi, B.F, Salmond, G.P.C.
Deposit date:2012-05-09
Release date:2012-12-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Selectivity and Self-Assembly in the Control of a Bacterial Toxin by an Antitoxic Noncoding RNA Pseudoknot.
Proc.Natl.Acad.Sci.USA, 110, 2013
3H8A
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BU of 3h8a by Molmil
Crystal structure of E. coli enolase bound to its cognate RNase E recognition domain
Descriptor: Enolase, MAGNESIUM ION, RNase E
Authors:Nurmohamed, S, Luisi, B.F.
Deposit date:2009-04-29
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular recognition between Escherichia coli enolase and ribonuclease E.
Acta Crystallogr.,Sect.D, 66, 2010
297D
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BU of 297d by Molmil
X-RAY AND SOLUTION STUDIES OF DNA OLIGOMERS AND IMPLICATIONS FOR THE STRUCTURAL BASIS OF A-TRACT-DEPENDENT CURVATURE
Descriptor: DNA (5'-D(*CP*GP*CP*AP*IP*AP*TP*(5CM)P*TP*GP*CP*G)-3')
Authors:Arbuckle, N.D, Luisi, B.F.
Deposit date:1996-11-19
Release date:1997-02-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray and solution studies of DNA oligomers and implications for the structural basis of A-tract-dependent curvature.
J.Mol.Biol., 267, 1997
285D
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BU of 285d by Molmil
X-RAY AND SOLUTION STUDIES OF DNA OLIGOMERS AND IMPLICATIONS FOR THE STRUCTURAL BASIS OF A-TRACT-DEPENDENT CURVATURE
Descriptor: DNA (5'-D(*CP*GP*CP*AP*IP*AP*TP*(5CM)P*TP*GP*CP*G)-3')
Authors:Shatzky-Schwartz, M, Shakked, Z, Luisi, B.F.
Deposit date:1996-09-11
Release date:1997-05-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray and solution studies of DNA oligomers and implications for the structural basis of A-tract-dependent curvature.
J.Mol.Biol., 267, 1997
2YJN
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BU of 2yjn by Molmil
Structure of the glycosyltransferase EryCIII from the erythromycin biosynthetic pathway, in complex with its activating partner, EryCII
Descriptor: DTDP-4-KETO-6-DEOXY-HEXOSE 3,4-ISOMERASE, GLYCOSYLTRANSFERASE
Authors:Moncrieffe, M.C, Fernandez, M.J, Spiteller, D, Matsumura, H, Gay, N.J, Luisi, B.F, Leadlay, P.F.
Deposit date:2011-05-20
Release date:2011-11-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.091 Å)
Cite:Structure of the Glycosyltransferase Eryciii in Complex with its Activating P450 Homologue Erycii.
J.Mol.Biol., 415, 2012
4O7J
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BU of 4o7j by Molmil
Crystal structure of CarG
Descriptor: CarG, SODIUM ION
Authors:Tichy, E.M, Luisi, B.F, Salmond, G.P.C.
Deposit date:2013-12-24
Release date:2014-03-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the carbapenem intrinsic resistance protein CarG
J.Mol.Biol., 426, 2014
7P03
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BU of 7p03 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation without nucleotides
Descriptor: Pleiotropic ABC efflux transporter of multiple drugs
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
4OWG
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BU of 4owg by Molmil
Crystal structure of rabbit muscle triosephosphate isomerase-PEP complex
Descriptor: PHOSPHOENOLPYRUVATE, Triosephosphate isomerase
Authors:Du, D, Luisi, B.
Deposit date:2014-02-01
Release date:2014-03-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of rabbit muscle triosephosphate isomerase-PEP complex
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