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PDB: 33 件

6O1O
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Cryo-EM structure of the T. thermophilus Csm complex bound to target ssRNA
分子名称: Csm1, Csm2, Csm3, ...
著者Liu, J.J, Liu, T.Y.
登録日2019-02-21
公開日2019-07-10
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Target preference of Type III-A CRISPR-Cas complexes at the transcription bubble.
Nat Commun, 10, 2019
5G06
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Cryo-EM structure of yeast cytoplasmic exosome
分子名称: EXOSOME COMPLEX COMPONENT CSL4, EXOSOME COMPLEX COMPONENT MTR3, EXOSOME COMPLEX COMPONENT RRP4, ...
著者Liu, J.J, Niu, C.Y, Wu, Y, Tan, D, Wang, Y, Ye, M.D, Liu, Y, Zhao, W.W, Zhou, K, Liu, Q.S, Dai, J.B, Yang, X.R, Dong, M.Q, Huang, N, Wang, H.W.
登録日2016-03-17
公開日2016-06-15
最終更新日2017-08-02
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryoem Structure of Yeast Cytoplasmic Exosome Complex.
Cell Res., 26, 2016
6NY3
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CasX ternary complex with 30bp target DNA
分子名称: CasX, DNA Non-target strand, DNA target strand, ...
著者Liu, J.J, Orlova, N, Nogales, E, Doudna, J.A.
登録日2019-02-10
公開日2019-02-27
最終更新日2019-12-25
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献CasX enzymes comprise a distinct family of RNA-guided genome editors.
Nature, 566, 2019
6NY2
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CasX-gRNA-DNA(45bp) state I
分子名称: CasX, DNA Non-target strand, DNA target strand, ...
著者Liu, J.J, Orlova, N, Nogales, E, Doudna, J.A.
登録日2019-02-10
公開日2019-02-27
最終更新日2019-12-25
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献CasX enzymes comprise a distinct family of RNA-guided genome editors.
Nature, 566, 2019
6NY1
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CasX-gRNA-DNA(30bp) State II
分子名称: CasX, DNA Non-target strand, DNA target strand, ...
著者Liu, J.J, Orlova, N, Nogales, E, Doudna, J.A.
登録日2019-02-10
公開日2019-02-27
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献CasX enzymes comprise a distinct family of RNA-guided genome editors.
Nature, 566, 2019
7YOJ
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BU of 7yoj by Molmil
Structure of CasPi with guide RNA and target DNA
分子名称: CasPi, DNA (30-MER), DNA (5'-D(P*CP*GP*GP*GP*AP*TP*GP*CP*CP*CP*AP*G)-3'), ...
著者Li, C.P, Wang, J, Liu, J.J.
登録日2022-08-01
公開日2023-02-15
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献The compact Cas pi (Cas12l) 'bracelet' provides a unique structural platform for DNA manipulation.
Cell Res., 33, 2023
3LE6
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BU of 3le6 by Molmil
The structure of cyclin dependent kinase 2 (CKD2) with a pyrazolobenzodiazepine inhibitor
分子名称: 5-(2-chlorophenyl)-3-methyl-7-nitropyrazolo[3,4-b][1,4]benzodiazepine, Cell division protein kinase 2
著者Lukacs, C.M, Swain, A, Crowther, R.L, Kammlott, R.U, Liu, J.J.
登録日2010-01-14
公開日2010-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Pyrazolobenzodiazepines: part I. Synthesis and SAR of a potent class of kinase inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
5WFE
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BU of 5wfe by Molmil
Cas1-Cas2-IHF-DNA holo-complex
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (28-MER), ...
著者Wright, A.V, Liu, J.J, Nogales, E, Doudna, J.A.
登録日2017-07-11
公開日2017-08-02
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Structures of the CRISPR genome integration complex.
Science, 357, 2017
8IBX
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BU of 8ibx by Molmil
Structure of R2 with 3'UTR and DNA in unwinding state
分子名称: 3'UTR, DNA (60-MER), Reverse transcriptase-like protein, ...
著者Deng, P, Tan, S, Wang, J, Liu, J.J.
登録日2023-02-10
公開日2023-09-20
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
8IBW
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Structure of R2 with 3'UTR and DNA in binding state
分子名称: 3'UTR, DNA (60-MER), Reverse transcriptase-like protein, ...
著者Deng, P, Tan, S, Wang, J, Liu, J.J.
登録日2023-02-10
公開日2023-09-20
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
8IBZ
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Structure of R2 with 5'ORF and 3'UTR
分子名称: 5ORF-linker-3UTR, Reverse transcriptase-like protein, ZINC ION
著者Deng, P, Tan, S, Wang, J, Liu, J.J.
登録日2023-02-10
公開日2023-09-20
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
8IBY
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BU of 8iby by Molmil
Structure of R2 with 5'ORF
分子名称: 5'ORF RNA, Reverse transcriptase-like protein, ZINC ION
著者Deng, P, Tan, S, Wang, J, Liu, J.J.
登録日2023-02-10
公開日2023-09-20
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
6MCC
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BU of 6mcc by Molmil
CryoEM structure of AcrIIA2 homolog in complex with CRISPR-Cas9
分子名称: Anti-CRISPR AcrIIA2 Homolog, CRISPR-associated endonuclease Cas9, Single guide RNA (116-MER)
著者Jiang, F, Liu, J.J, Doudna, J.A.
登録日2018-08-31
公開日2019-01-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Temperature-Responsive Competitive Inhibition of CRISPR-Cas9.
Mol. Cell, 73, 2019
6P7M
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BU of 6p7m by Molmil
Cryo-EM structure of LbCas12a-crRNA: AcrVA4 (1:2 complex)
分子名称: Cas12a, MAGNESIUM ION, anti-CRISPR VA4, ...
著者Knott, G.J, Liu, J.J, Doudna, J.A.
登録日2019-06-06
公開日2019-08-21
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for AcrVA4 inhibition of specific CRISPR-Cas12a.
Elife, 8, 2019
6P7N
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BU of 6p7n by Molmil
Cryo-EM structure of LbCas12a-crRNA: AcrVA4 (2:2 complex)
分子名称: Cas12a, MAGNESIUM ION, anti-CRISPR VA4, ...
著者Knott, G.J, Liu, J.J, Doudna, J.A.
登録日2019-06-06
公開日2019-08-21
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structural basis for AcrVA4 inhibition of specific CRISPR-Cas12a.
Elife, 8, 2019
8K0R
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BU of 8k0r by Molmil
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric post cleavge state
分子名称: DNA, MAGNESIUM ION, RNA (542-MER)
著者Zhu, H.Z, Liu, J.J.G.
登録日2023-07-10
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (2.65 Å)
主引用文献Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage.
Science, 383, 2024
8K0S
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BU of 8k0s by Molmil
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 with 10-nt TRS at symmetric apo state
分子名称: MAGNESIUM ION, RNA (543-MER)
著者Zhu, H.Z, Liu, J.J.G.
登録日2023-07-10
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage.
Science, 383, 2024
8K0P
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BU of 8k0p by Molmil
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric apo state
分子名称: MAGNESIUM ION, RNA (542-MER)
著者Zhu, H.Z, Liu, J.J.G.
登録日2023-07-10
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage.
Science, 383, 2024
8K15
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BU of 8k15 by Molmil
The Streptococcus azizii ORF-less Group IIC intron HYER2 at apo state
分子名称: MAGNESIUM ION, RNA (470-MER)
著者Zhu, H.Z, Liu, J.J.G.
登録日2023-07-10
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage.
Science, 383, 2024
8K0Q
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BU of 8k0q by Molmil
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric pre-cleavage state
分子名称: DNA, MAGNESIUM ION, RNA (542-MER)
著者Zhu, H.Z, Liu, J.J.G.
登録日2023-07-10
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage.
Science, 383, 2024
8IYQ
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BU of 8iyq by Molmil
Structure of CbCas9 bound to 20-nucleotide complementary DNA substrate
分子名称: NTS, TS, deadCbCas9, ...
著者Zhang, S, Lin, S, Liu, J.J.G.
登録日2023-04-05
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.46 Å)
主引用文献Pro-CRISPR PcrIIC1-associated Cas9 system for enhanced bacterial immunity.
Nature, 630, 2024
8WMM
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BU of 8wmm by Molmil
Structure of CbCas9-PcrIIC1 complex bound to 28-bp DNA substrate (20-nt complementary)
分子名称: MAGNESIUM ION, NTS, PcrIIC1, ...
著者Zhang, S, Lin, S, Liu, J.J.G.
登録日2023-10-04
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Pro-CRISPR PcrIIC1-associated Cas9 system for enhanced bacterial immunity.
Nature, 630, 2024
8WMN
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BU of 8wmn by Molmil
Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (symmetric 20-nt complementary)
分子名称: DNA (62-MER), MAGNESIUM ION, PcrIIC1, ...
著者Zhang, S, Lin, S, Liu, J.J.G.
登録日2023-10-04
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Pro-CRISPR PcrIIC1-associated Cas9 system for enhanced bacterial immunity.
Nature, 630, 2024
8WR4
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BU of 8wr4 by Molmil
Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (non-targeting complex)
分子名称: CbCas9 effector-1, DNA (62-MER), MAGNESIUM ION, ...
著者Zhang, S, Lin, S, Liu, J.J.G.
登録日2023-10-13
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Pro-CRISPR PcrIIC1-associated Cas9 system for enhanced bacterial immunity.
Nature, 630, 2024
8WMH
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BU of 8wmh by Molmil
Structure of CbCas9 bound to 6-nucleotide complementary DNA substrate
分子名称: NTS, TS, deadCbCas9, ...
著者Zhang, S, Lin, S, Liu, J.J.G.
登録日2023-10-03
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Pro-CRISPR PcrIIC1-associated Cas9 system for enhanced bacterial immunity.
Nature, 630, 2024

 

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