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PDB: 286 results

8KF1
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BU of 8kf1 by Molmil
The cryo-EM structure of AV-45 bound type1 amyloid beta 42 fibril.
Descriptor: 4-[2-[6-[2-[2-(2-fluoranylethoxy)ethoxy]ethoxy]pyridin-3-yl]ethyl]-~{N}-methyl-aniline, P3(40)
Authors:Zhao, Q.Y, Tao, Y.Q, Liu, C, Li, D.
Deposit date:2023-08-15
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The cryo-EM structure of AV-45 bound type1 amyloid beta 42 fibril.
To Be Published
7YK2
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BU of 7yk2 by Molmil
Cryo-EM structure of Apo-alpha-syn fibril
Descriptor: Alpha-synuclein
Authors:Xu, Q.H, Xia, W.C, Tao, Y.Q, Liu, C.
Deposit date:2022-07-21
Release date:2023-03-22
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Conformational Dynamics of an alpha-Synuclein Fibril upon Receptor Binding Revealed by Insensitive Nuclei Enhanced by Polarization Transfer-Based Solid-State Nuclear Magnetic Resonance and Cryo-Electron Microscopy.
J.Am.Chem.Soc., 145, 2023
7YK8
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BU of 7yk8 by Molmil
Cryo-EM structure of dLAG3-alpha-syn fibril
Descriptor: Alpha-synuclein
Authors:Xu, Q.H, Xia, W.C, Tao, Y.Q, Liu, C.
Deposit date:2022-07-22
Release date:2023-03-22
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Conformational Dynamics of an alpha-Synuclein Fibril upon Receptor Binding Revealed by Insensitive Nuclei Enhanced by Polarization Transfer-Based Solid-State Nuclear Magnetic Resonance and Cryo-Electron Microscopy.
J.Am.Chem.Soc., 145, 2023
7X83
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BU of 7x83 by Molmil
Cryo-EM structure of the TMEM106B fibril from normal elder
Descriptor: Transmembrane protein 106B
Authors:Xia, W.C, Zhao, Q.Y, Fan, Y, Sun, Y.P, Tao, Y.Q, Liu, C.
Deposit date:2022-03-11
Release date:2022-06-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Generic amyloid fibrillation of TMEM106B in patient with Parkinson's disease dementia and normal elders.
Cell Res., 32, 2022
7X84
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BU of 7x84 by Molmil
Cryo-EM structure of the TMEM106B fibril from Parkinson's disease dementia
Descriptor: Transmembrane protein 106B
Authors:Zhao, Q.Y, Xia, W.C, Fan, Y, Sun, Y.P, Tao, Y.Q, Liu, C.
Deposit date:2022-03-11
Release date:2022-06-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Generic amyloid fibrillation of TMEM106B in patient with Parkinson's disease dementia and normal elders.
Cell Res., 32, 2022
3T4G
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BU of 3t4g by Molmil
AIIGLMV segment from Alzheimer's Amyloid-Beta displayed on 54-membered macrocycle scaffold
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Cyclic pseudo-peptide (ORN)AIIGLMV(ORN)KF(HAO)(4BF)K
Authors:Zhao, M, Liu, C, Cheng, P.N, Eisenberg, D, Nowick, J.S.
Deposit date:2011-07-26
Release date:2012-10-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Amyloid beta-sheet mimics that antagonize protein aggregation and reduce amyloid toxicity.
Nat Chem, 4, 2012
6B7N
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BU of 6b7n by Molmil
Cryo-electron microscopy structure of porcine delta coronavirus spike protein in the pre-fusion state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shang, J, Zheng, Y, Yang, Y, Liu, C, Geng, Q, Tai, W, Du, L, Zhou, Y, Zhang, W, Li, F.
Deposit date:2017-10-04
Release date:2017-10-25
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-Electron Microscopy Structure of Porcine Deltacoronavirus Spike Protein in the Prefusion State
J. Virol., 92, 2018
8WCK
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BU of 8wck by Molmil
FCP tetramer in Chaetoceros gracilis
Descriptor: (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, CHLOROPHYLL A, Chlorophyll a/b-binding protein, ...
Authors:Feng, Y, Li, Z, Zhou, C, Shen, J.-R, Liu, C, Wang, W.
Deposit date:2023-09-12
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Structural and spectroscopic insights into fucoxanthin chlorophyll a/c-binding proteins of diatoms in diverse oligomeric states.
Plant Commun., 2024
8WCL
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BU of 8wcl by Molmil
FCP pentamer in Chaetoceros gracilis
Descriptor: (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, CHLOROPHYLL A, ...
Authors:Feng, Y, Li, Z, Zhou, C, Liu, C, Shen, J.-R, Wang, W.
Deposit date:2023-09-12
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:Structural and spectroscopic insights into fucoxanthin chlorophyll a/c-binding proteins of diatoms in diverse oligomeric states.
Plant Commun., 2024
2OTA
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BU of 2ota by Molmil
Crystal structure of the UPF0352 protein CPS_2611 from Colwellia psychrerythraea. NESG target CsR4.
Descriptor: UPF0352 protein CPS_2611
Authors:Vorobiev, S.M, Zhou, W, Su, M, Seetharaman, J, Wang, H, Janjua, H, Cunningham, K, Ma, L.-C, Xiao, R, Liu, C, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-02-07
Release date:2007-02-20
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the UPF0352 protein CPS_2611 from Colwellia psychrerythraea. NESG target CsR4.
To be Published
2KNO
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BU of 2kno by Molmil
NMR Solution Structure of SH2 Domain of the Human Tensin Like C1 Domain Containing Phosphatase (TENC1)
Descriptor: Tensin-like C1 domain-containing phosphatase
Authors:Chen, L, Feng, R, Liu, C, Zhu, G.
Deposit date:2009-08-27
Release date:2010-09-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Solution Structure of SH2 Domain of the Human Tensin Like C1 Domain Containing Phosphatase (TENC1)
To be Published
7F29
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BU of 7f29 by Molmil
Cryo-EM structure of the fibril formed by disaccharide-modified amyloid-beta(1-42)
Descriptor: ACETIC ACID, Amyloid-beta A4 protein, beta-D-galactopyranose-(1-3)-2-amino-2-deoxy-alpha-D-galactopyranose
Authors:Xia, W.C, Sun, Y.P, Liu, C.
Deposit date:2021-06-10
Release date:2022-07-13
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:O-Glycosylation Induces Amyloid-beta To Form New Fibril Polymorphs Vulnerable for Degradation
J.Am.Chem.Soc., 143, 2021
2KKM
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BU of 2kkm by Molmil
Solution NMR structure of yeast protein YOR252W [residues 38-178]: Northeast Structural Genomics Consortium target YT654
Descriptor: Translation machinery-associated protein 16
Authors:Cort, J.R, Yee, A, Liu, C, Arrowsmith, C.H, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-06-26
Release date:2009-10-06
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution NMR structure of yeast protein YOR252W
To be Published
4P31
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BU of 4p31 by Molmil
Crystal structure of a selenomethionine derivative of E. coli LptB in complex with ADP-Magensium
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lipopolysaccharide export system ATP-binding protein LptB, MAGNESIUM ION
Authors:Sherman, D.J, Lazarus, M.B, Murphy, L, Liu, C, Walker, S, Ruiz, N, Kahne, D.
Deposit date:2014-03-05
Release date:2014-03-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Decoupling catalytic activity from biological function of the ATPase that powers lipopolysaccharide transport.
Proc.Natl.Acad.Sci.USA, 111, 2014
4MYD
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BU of 4myd by Molmil
1.37 Angstrom Crystal Structure of E. Coli 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (MenH) in complex with SHCHC
Descriptor: 2-(3-CARBOXYPROPIONYL)-6-HYDROXY-CYCLOHEXA-2,4-DIENE CARBOXYLIC ACID, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
Authors:Sun, Y, Yin, S, Feng, Y, Li, J, Zhou, J, Liu, C, Zhu, G, Guo, Z.
Deposit date:2013-09-27
Release date:2014-04-23
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.374 Å)
Cite:Molecular basis of the general base catalysis of an alpha / beta-hydrolase catalytic triad.
J.Biol.Chem., 289, 2014
4MXD
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BU of 4mxd by Molmil
1.45 angstronm crystal structure of E.coli 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (MenH)
Descriptor: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Sun, Y, Yin, S, Feng, Y, Li, J, Zhou, J, Liu, C, Zhu, G, Guo, Z.
Deposit date:2013-09-26
Release date:2014-04-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Molecular basis of the general base catalysis of an alpha / beta-hydrolase catalytic triad.
J.Biol.Chem., 289, 2014
4P32
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BU of 4p32 by Molmil
Crystal structure of E. coli LptB in complex with ADP-magnesium
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lipopolysaccharide export system ATP-binding protein LptB, MAGNESIUM ION
Authors:Sherman, D.J, Lazarus, M.B, Murphy, L, Liu, C, Walker, S, Ruiz, N, Kahne, D.
Deposit date:2014-03-05
Release date:2014-03-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Decoupling catalytic activity from biological function of the ATPase that powers lipopolysaccharide transport.
Proc.Natl.Acad.Sci.USA, 111, 2014
4P33
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BU of 4p33 by Molmil
Crystal structure of E. coli LptB-E163Q in complex with ATP-sodium
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, Lipopolysaccharide export system ATP-binding protein LptB, ...
Authors:Sherman, D.J, Lazarus, M.B, Murphy, L, Liu, C, Walker, S, Ruiz, N, Kahne, D.
Deposit date:2014-03-05
Release date:2014-03-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Decoupling catalytic activity from biological function of the ATPase that powers lipopolysaccharide transport.
Proc.Natl.Acad.Sci.USA, 111, 2014
4MYS
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BU of 4mys by Molmil
1.4 Angstrom Crystal Structure of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase with SHCHC and Pyruvate
Descriptor: 2-(3-CARBOXYPROPIONYL)-6-HYDROXY-CYCLOHEXA-2,4-DIENE CARBOXYLIC ACID, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase, GLYCEROL, ...
Authors:Sun, Y, Yin, S, Feng, Y, Li, J, Zhou, J, Liu, C, Zhu, G, Guo, Z.
Deposit date:2013-09-28
Release date:2014-04-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.423 Å)
Cite:Molecular basis of the general base catalysis of an alpha / beta-hydrolase catalytic triad.
J.Biol.Chem., 289, 2014
4OPC
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BU of 4opc by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-05
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014
4OPL
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BU of 4opl by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Descriptor: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-05
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014
8X0S
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BU of 8x0s by Molmil
Crystal structure of r(G4C2)2
Descriptor: POTASSIUM ION, RNA (5'-R(*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*C)-3')
Authors:Geng, Y, Liu, C, Cai, Q, Zhu, G.
Deposit date:2023-11-05
Release date:2024-06-19
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (2.956 Å)
Cite:Crystal structure of a tetrameric RNA G-quadruplex formed by hexanucleotide repeat expansions of C9orf72 in ALS/FTD.
Nucleic Acids Res., 52, 2024
4OPD
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BU of 4opd by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Descriptor: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-05
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014
4OPI
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BU of 4opi by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Descriptor: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-05
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014
4OPT
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BU of 4opt by Molmil
Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase
Descriptor: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GERANYLGERANYL DIPHOSPHATE, ...
Authors:McAndrew, R.P, Kung, Y, Xie, X, Liu, C, Pereira, J.H, Keasling, J.D, Adams, P.D.
Deposit date:2014-02-06
Release date:2014-07-09
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Structure, 22, 2014

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