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PDB: 71 results

5JEX
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BU of 5jex by Molmil
Crystal structure of type 2 PDF from Streptococcus agalactiae, crystallized in imidazole buffer
Descriptor: IMIDAZOLE, Peptide deformylase, ZINC ION
Authors:Fieulaine, S, Giglione, C, Meinnel, T.
Deposit date:2016-04-19
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:A unique peptide deformylase platform to rationally design and challenge novel active compounds.
Sci Rep, 6, 2016
5JF3
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BU of 5jf3 by Molmil
Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor AT018
Descriptor: ACETATE ION, IMIDAZOLE, Peptide deformylase, ...
Authors:Fieulaine, S, Giglione, C, Meinnel, T.
Deposit date:2016-04-19
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A unique peptide deformylase platform to rationally design and challenge novel active compounds.
Sci Rep, 6, 2016
5JEY
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BU of 5jey by Molmil
Crystal structure of type 2 PDF from Streptococcus agalactiae, crystallized in cacodylate buffer
Descriptor: NICKEL (II) ION, Peptide deformylase
Authors:Fieulaine, S, Giglione, C, Meinnel, T.
Deposit date:2016-04-19
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A unique peptide deformylase platform to rationally design and challenge novel active compounds.
Sci Rep, 6, 2016
5JF6
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BU of 5jf6 by Molmil
Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor 6b (AB47)
Descriptor: 2-(5-bromo-1H-indol-3-yl)-N-hydroxyacetamide, ACETATE ION, Peptide deformylase, ...
Authors:Fieulaine, S, Giglione, C, Meinnel, T, Hamiche, K.
Deposit date:2016-04-19
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A unique peptide deformylase platform to rationally design and challenge novel active compounds.
Sci Rep, 6, 2016
5JF0
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BU of 5jf0 by Molmil
Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with tripeptide Met-Ala-Arg
Descriptor: ACETATE ION, MET-ALA-ARG, NICKEL (II) ION, ...
Authors:Fieulaine, S, Giglione, C, Meinnel, T.
Deposit date:2016-04-19
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A unique peptide deformylase platform to rationally design and challenge novel active compounds.
Sci Rep, 6, 2016
7OWR
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BU of 7owr by Molmil
HsNMT1 in complex with both MyrCoA and peptide GGKSFSKPR
Descriptor: GLY-GLY-LYS-SER-PHE-SER-LYS-PRO-ARG, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWQ
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BU of 7owq by Molmil
HsNMT1 in complex with both MyrCoA and peptide N-Methylated-GNCFSKPR
Descriptor: Glycylpeptide N-tetradecanoyltransferase 1, MGY-ASN-CYS-PHE-SER-LYS-PRO-ARG, TETRADECANOYL-COA
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWP
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BU of 7owp by Molmil
HsNMT1 in complex with both MyrCoA and ACE-G-(L-ORN)SFSKPR
Descriptor: ACE-GLY-ORN-SER-PHE-SER-LYS-PRO-ARG, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWO
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BU of 7owo by Molmil
HsNMT1 in complex with both MyrCoA and N-acetylated KSFSKPR peptide
Descriptor: COENZYME A, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWN
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BU of 7own by Molmil
HsNMT1 in complex with both MyrCoA and peptide AKSFSKPR
Descriptor: ALA-LYS-SER-PHE-SER-LYS-PRO-ARG, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWM
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BU of 7owm by Molmil
HsNMT1 in complex with both MyrCoA and HCPA substrate peptide GKQNSKLR
Descriptor: GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, Neuron-specific calcium-binding protein hippocalcin, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
1LRU
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BU of 1lru by Molmil
Crystal Structure of E.coli Peptide Deformylase Complexed with Antibiotic Actinonin
Descriptor: ACTINONIN, PEPTIDE DEFORMYLASE, SULFATE ION, ...
Authors:Guilloteau, J.-P, Mathieu, M, Giglione, C, Blanc, V, Dupuy, A, Chevrier, M, Gil, P, Famechon, A, Meinnel, T, Mikol, V.
Deposit date:2002-05-16
Release date:2002-07-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structures of four peptide deformylases bound to the antibiotic actinonin reveal two distinct types: a platform for the structure-based design of antibacterial agents.
J.Mol.Biol., 320, 2002
1LRY
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BU of 1lry by Molmil
Crystal Structure of P. aeruginosa Peptide Deformylase Complexed with Antibiotic Actinonin
Descriptor: ACTINONIN, PEPTIDE deformylase, ZINC ION
Authors:Guilloteau, J.-P, Mathieu, M, Giglione, C, Blanc, V, Dupuy, A, Chevrier, M, Gil, P, Famechon, A, Meinnel, T, Mikol, V.
Deposit date:2002-05-16
Release date:2002-07-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structures of four peptide deformylases bound to the antibiotic actinonin reveal two distinct types: a platform for the structure-based design of antibacterial agents.
J.Mol.Biol., 320, 2002
6QRM
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BU of 6qrm by Molmil
HsNMT1 in complex with both MyrCoA and GNCFSKRRAA substrates
Descriptor: Apoptosis-inducing factor 3, CHLORIDE ION, COENZYME A, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-02-19
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
4N57
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BU of 4n57 by Molmil
Crystal structure of aminoglycoside phosphotransferase APH(2'')-IVa ADP complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, APH(2'')-Id, MAGNESIUM ION
Authors:Kaplan, E, Leban, N, Chaloin, L, Guichou, J.-F, Lionne, C.
Deposit date:2013-10-09
Release date:2014-12-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of aminoglycoside phosphotransferase APH(2'')-IVa ADP complex
To be Published
6SKJ
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BU of 6skj by Molmil
DeltaC2 C-terminal truncation of HsNMT1 in complex with MyrCoA and GNCFSKPR substrates
Descriptor: Apoptosis-inducing factor 3, COENZYME A, GLYCEROL, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-15
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SK8
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BU of 6sk8 by Molmil
DeltaC3 C-terminal truncation of HsNMT1 in complex with MyrCoA and GDCFSKPR substrates
Descriptor: Apoptosis-inducing factor 3, CHLORIDE ION, GLYCEROL, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-14
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SK2
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BU of 6sk2 by Molmil
HsNMT1 in complex with both MyrCoA and Acetylated-GKSFSKPR peptide reveals N-terminal Lysine Myristoylation
Descriptor: Apoptosis-inducing factor 3, COENZYME A, GLYCEROL, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-14
Release date:2020-03-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.90000653 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
7R4K
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BU of 7r4k by Molmil
Crystal structure of human mitochondrial NAD kinase
Descriptor: MAGNESIUM ION, NAD kinase 2, mitochondrial, ...
Authors:Labesse, G, Mary, C, Gelin, M, Lionne, C.
Deposit date:2022-02-08
Release date:2022-07-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.33 Å)
Cite:Crystal structure of human NADK2 reveals a dimeric organization and active site occlusion by lysine acetylation.
Mol.Cell, 82, 2022
7R4J
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BU of 7r4j by Molmil
Crystal structure of human mitochondrial NAD kinase
Descriptor: CALCIUM ION, NAD kinase 2, mitochondrial
Authors:Labesse, G, Mary, C, Gelin, M, Lionne, C.
Deposit date:2022-02-08
Release date:2022-07-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of human NADK2 reveals a dimeric organization and active site occlusion by lysine acetylation.
Mol.Cell, 82, 2022
7R4M
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BU of 7r4m by Molmil
Crystal structure of mitochondrial NAD kinase
Descriptor: CALCIUM ION, NAD kinase 2, mitochondrial, ...
Authors:Labesse, G, Mary, C, Gelin, M, Lionne, C.
Deposit date:2022-02-08
Release date:2022-07-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of human NADK2 reveals a dimeric organization and active site occlusion by lysine acetylation.
Mol.Cell, 82, 2022
7R4L
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BU of 7r4l by Molmil
Crystal structure of human mitochondrial NAD kinase
Descriptor: FE (III) ION, NAD kinase 2, mitochondrial, ...
Authors:Labesse, G, Mary, C, Gelin, M, Lionne, C.
Deposit date:2022-02-08
Release date:2022-07-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of human NADK2 reveals a dimeric organization and active site occlusion by lysine acetylation.
Mol.Cell, 82, 2022
3M6R
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BU of 3m6r by Molmil
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B) G41M mutant in complex with actinonin
Descriptor: ACTINONIN, Peptide deformylase 1B, ZINC ION
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2010-03-16
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis
Plos Biol., 9, 2011
4JE6
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BU of 4je6 by Molmil
Crystal structure of a human-like mitochondrial peptide deformylase
Descriptor: Peptide deformylase 1A, chloroplastic/mitochondrial, ZINC ION
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2013-02-26
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Understanding the highly efficient catalysis of prokaryotic peptide deformylases by shedding light on the determinants specifying the low activity of the human counterpart.
Acta Crystallogr.,Sect.D, 70, 2014
2FAM
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BU of 2fam by Molmil
X-RAY CRYSTAL STRUCTURE OF FERRIC APLYSIA LIMACINA MYOGLOBIN IN DIFFERENT LIGANDED STATES
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, THIOCYANATE ION
Authors:Conti, E, Moser, C, Rizzi, M, Mattevi, A, Lionetti, C, Coda, A, Ascenzi, P, Brunori, M, Bolognesi, M.
Deposit date:1993-07-20
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystal structure of ferric Aplysia limacina myoglobin in different liganded states.
J.Mol.Biol., 233, 1993

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