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PDB: 66 件

1JXL
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Crystal Structure of a Y-Family DNA Polymerase in a Ternary Complex with DNA Substrates and an Incoming Nucleotide
分子名称: 1,2-ETHANEDIOL, 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3', ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2001-09-07
公開日2001-10-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication.
Cell(Cambridge,Mass.), 107, 2001
1JX4
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Crystal Structure of a Y-family DNA Polymerase in a Ternary Complex with DNA Substrates and an Incoming Nucleotide
分子名称: 2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*T*TP*CP*AP*TP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2001-09-05
公開日2001-10-05
最終更新日2011-11-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication.
Cell(Cambridge,Mass.), 107, 2001
5X45
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Crystal structure of 2A protease from Human rhinovirus C15
分子名称: ZINC ION, protease 2A
著者Ling, H, Yang, P, Shaw, N, Sun, Y, Wang, X.
登録日2017-02-10
公開日2018-02-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.602 Å)
主引用文献Structural view of the 2A protease from human rhinovirus C15.
Acta Crystallogr.,Sect.F, 74, 2018
3FDS
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Structural insight into recruitment of translesion DNA polymerase Dpo4 to sliding clamp PCNA
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA polymerase IV, ...
著者Ling, H.
登録日2008-11-26
公開日2009-01-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural insight into recruitment of translesion DNA polymerase Dpo4 to sliding clamp PCNA
Mol.Microbiol., 71, 2009
1N48
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Y-family DNA polymerase Dpo4 in complex with DNA containing abasic lesion
分子名称: 5'-D(*CP*AP*(3DR)P*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2002-10-30
公開日2004-02-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Y-family polymerase complexed with abasic lesions: catching DNA with a loaded nucleoside triphosphate
To be Published
1N56
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Y-family DNA polymerase Dpo4 in complex with DNA containing abasic lesion
分子名称: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*AP*A)-3', 5'-D(*TP*CP*AP*TP*(3DR)P*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2002-11-04
公開日2004-02-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Snapshots of replication through an abasic lesion; structural basis for base substitutions and frameshifts.
Mol.Cell, 13, 2004
2BOS
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A MUTANT SHIGA-LIKE TOXIN IIE BOUND TO ITS RECEPTOR
分子名称: N-BUTANE, PROTEIN (SHIGA-LIKE TOXIN IIE B SUBUNIT), alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, ...
著者Ling, H, Boodhoo, A, Armstrong, G.D, Clark, C.G, Brunton, J.L, Read, R.J.
登録日1998-10-20
公開日1999-10-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A mutant Shiga-like toxin IIe bound to its receptor Gb(3): structure of a group II Shiga-like toxin with altered binding specificity.
Structure Fold.Des., 8, 2000
2AGQ
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Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*(DOC))-3', 5'-D(*TP*CP*AP*TP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3', ...
著者Ling, H, Yang, W.
登録日2005-07-27
公開日2005-09-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2AGO
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Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
分子名称: CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*G)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), ...
著者Ling, H, Yang, W.
登録日2005-07-27
公開日2005-09-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2AGP
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Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*(DOC)-3'), ...
著者Ling, H, Yang, W.
登録日2005-07-27
公開日2005-09-06
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
1C48
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MUTATED SHIGA-LIKE TOXIN B SUBUNIT (G62T)
分子名称: PROTEIN (SHIGA-LIKE TOXIN I B SUBUNIT)
著者Ling, H, Bast, D, Brunton, J.L, Read, R.J.
登録日1999-08-11
公開日2000-08-16
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Identification of the Primary Receptor Binding Site of Shiga-Like Toxin B Subunits: Structures of Mutated Shiga-Like Toxin I B-Pentamer with and without Bound Carbohydrate
To be Published
1C4Q
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MUTATED SHIGA-LIKE TOXIN B SUBUNIT (F30A/W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
分子名称: PROTEIN (SHIGA-LIKE TOXIN I SUBUNIT B), alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Ling, H, Brunton, J.L, Read, R.J.
登録日1999-08-31
公開日2000-09-20
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Identification of the Primary Receptor Binding Site of Shiga-Like Toxin B Subunits: Structures of Mutated Shiga-Like Toxin I B-Pentamer with and without Bound Carbohydrate
To be Published
1S0M
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BU of 1s0m by Molmil
Crystal structure of a Benzo[a]pyrene Diol Epoxide adduct in a ternary complex with a DNA polymerase
分子名称: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*T)-3', ...
著者Ling, H, Sayer, J.M, Boudsocq, F, Plosky, B.S, Woodgate, R, Yang, W.
登録日2003-12-31
公開日2004-03-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of a benzo[a]pyrene diol epoxide adduct in a ternary complex with a DNA polymerase.
Proc.Natl.Acad.Sci.USA, 101, 2004
1BOS
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SHIGA-LIKE TOXIN COMPLEXED WITH ITS RECEPTOR
分子名称: SHIGA-LIKE TOXIN I B SUBUNIT, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ...
著者Ling, H, Boodhoo, A, Hazes, B, Cummings, M.D, Armstrong, G.D, Brunton, J.L, Read, R.J.
登録日1998-01-13
公開日1999-02-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the shiga-like toxin I B-pentamer complexed with an analogue of its receptor Gb3.
Biochemistry, 37, 1998
1CQF
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THE COMPLEX OF THE MUTATED SHIGA TOXIN B SUBUNIT AND GB3 TRISACCHARIDE
分子名称: SHIGA TOXIN B-CHAIN, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Ling, H, Bast, D, Brunton, J.L, Read, R.J.
登録日1999-08-06
公開日2000-08-07
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Complex of the Mutated Shiga Toxin B Subunit and Gb3 Trisaccharide
To be Published
1D1K
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MUTATED SHIGA-LIKE TOXIN B SUBUNIT (D17E/W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
分子名称: SHIGA-LIKE TOXIN I SUBUNIT B, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
著者Ling, H, Brunton, J.L, Read, R.J.
登録日1999-09-17
公開日2000-09-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mutated Shiga-like toxin B subunit (D17E/W34A) complexed with receptor Gb3 analogue
To be Published
1CZG
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STRUCTURE OF THE G62T MUTANT OF SHIGA-LIKE TOXIN I B SUBUNIT
分子名称: SHIGA TOXIN B-CHAIN
著者Ling, H, Bast, D, Brunton, J.L, Read, R.J.
登録日1999-09-03
公開日2000-09-13
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献STRUCTURE OF THE G62T MUTANT OF SHIGA-LIKE TOXIN I B SUBUNIT
To be Published
1CZW
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STRUCTURE OF THE W34A MUTANT OF SHIGA-LIKE TOXIN I B SUBUNIT
分子名称: SHIGA TOXIN B-CHAIN
著者Ling, H, Boodhoo, A, Brunton, J.L, Read, R.J.
登録日1999-09-07
公開日2000-09-08
最終更新日2018-03-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A native structure of the W34A mutant at 2.5 A
To be Published
1D1I
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MUTATED SHIGA-LIKE TOXIN B SUBUNIT (W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
分子名称: SHIGA TOXIN B-CHAIN, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Ling, H, Boodhoo, A, Brunton, J.L, Read, R.J.
登録日1999-09-17
公開日2000-09-20
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mutated Shiga-like Toxin B Subunit (W34A) Complexed with Receptor Gb3 Analogue
To be Published
1RYS
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REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION
分子名称: 1,2-ETHANEDIOL, 5'-D(*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*A)-3', 5'-D(*TP*CP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
著者Ling, H, Boudsocq, F, Plosky, B, Woodgate, R, Yang, W.
登録日2003-12-22
公開日2004-02-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Replication of a Cis-Syn Thymine Dimer at Atomic Resolution
Nature, 424, 2003
1RYR
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REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION
分子名称: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3', 5'-D(*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
著者Ling, H, Boudsocq, F, Plosky, B, Woodgate, R, Yang, W.
登録日2003-12-22
公開日2004-02-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Replication of a Cis-Syn Thymine Dimer at Atomic Resolution
Nature, 424, 2003
1S10
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Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2004-01-05
公開日2004-03-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1S0N
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Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*AP*CP*G)-3', 5'-D(*TP*AP*CP*GP*AP*CP*GP*TP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2003-12-31
公開日2004-03-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1S0O
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Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
分子名称: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', CALCIUM ION, ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2003-12-31
公開日2004-03-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
2IMW
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Mechanism of Template-Independent Nucleotide Incorporation Catalyzed by a Template-Dependent DNA Polymerase
分子名称: 1,2-ETHANEDIOL, 2',3'-dideoxyadenosine triphosphate, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3', ...
著者Ling, H, Yang, W.
登録日2006-10-05
公開日2007-01-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Mechanism of Template-independent Nucleotide Incorporation Catalyzed by a Template-dependent DNA Polymerase.
J.Mol.Biol., 365, 2007

 

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