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PDB: 491 件

7CQS
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Complex structure of HPPD with Topramezone
分子名称: 4-[3-(4,5-dihydro-1,2-oxazol-3-yl)-2-methyl-4-methylsulfonyl-phenyl]carbonyl-2-methyl-1~{H}-pyrazol-3-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.Y, Yang, G.F.
登録日2020-08-11
公開日2022-03-16
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
7CQR
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Complex structure of HPPD with Y16550
分子名称: 3-(3-chlorophenyl)-6-[(2,5-dimethyl-3-oxidanylidene-1~{H}-pyrazol-4-yl)carbonyl]-1,5-dimethyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.Y, Yang, G.F.
登録日2020-08-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.947 Å)
主引用文献Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
7E0X
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Crystal structure of Arabidopsis thaliana HPPD complexed with 4-hydroxyphenylacetic acid
分子名称: 4-HYDROXYPHENYLACETATE, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.Y, Yang, G.F.
登録日2021-01-28
公開日2021-12-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.887 Å)
主引用文献Rational Redesign of Enzyme via the Combination of Quantum Mechanics/Molecular Mechanics, Molecular Dynamics, and Structural Biology Study.
J.Am.Chem.Soc., 143, 2021
7EZQ
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BU of 7ezq by Molmil
Complex structure of AtHPPD with inhibitor Y15832
分子名称: 4-hydroxyphenylpyruvate dioxygenase, 6-(1,3-dimethyl-5-oxidanyl-pyrazol-4-yl)carbonyl-1,5-dimethyl-3-(2-methylphenyl)quinazoline-2,4-dione, COBALT (II) ION
著者Lin, H.Y, Yang, G.F.
登録日2021-06-01
公開日2022-06-01
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.886 Å)
主引用文献Complex structure of AtHPPD with inhibitor Y18093
To Be Published
7CJK
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BU of 7cjk by Molmil
Complex structure of AtHPPD with inhibitor Y18093
分子名称: 3-oxidanyl-2-[3,5,6-tris(chloranyl)-4-[(4-chlorophenyl)methylamino]pyridin-2-yl]carbonyl-cyclohex-2-en-1-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.Y, Yang, G.F.
登録日2020-07-11
公開日2021-07-14
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Complex structure of AtHPPD with inhibitor Y18093
To Be Published
5X45
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Crystal structure of 2A protease from Human rhinovirus C15
分子名称: ZINC ION, protease 2A
著者Ling, H, Yang, P, Shaw, N, Sun, Y, Wang, X.
登録日2017-02-10
公開日2018-02-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.602 Å)
主引用文献Structural view of the 2A protease from human rhinovirus C15.
Acta Crystallogr.,Sect.F, 74, 2018
7PKJ
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Streptococcus pyogenes apo GapN
分子名称: BETA-MERCAPTOETHANOL, GLYCEROL, Putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, ...
著者Schindelin, H, Albert, L.
登録日2021-08-25
公開日2022-03-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.989 Å)
主引用文献The Non-phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase GapN Is a Potential New Drug Target in Streptococcus pyogenes.
Front Microbiol, 13, 2022
7PKC
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Streptococcus pyogenes Apo-GapN C284S variant
分子名称: GLYCEROL, Putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, SULFATE ION
著者Schindelin, H, Albert, L.
登録日2021-08-25
公開日2022-03-16
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Non-phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase GapN Is a Potential New Drug Target in Streptococcus pyogenes.
Front Microbiol, 13, 2022
1SDR
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BU of 1sdr by Molmil
CRYSTAL STRUCTURE OF AN RNA DODECAMER CONTAINING THE ESCHERICHIA COLI SHINE-DALGARNO SEQUENCE
分子名称: RNA (5'-R(*AP*UP*CP*AP*CP*CP*UP*CP*CP*UP*UP*A)-3'), RNA (5'-R(*UP*AP*AP*GP*GP*AP*GP*GP*UP*GP*AP*U)-3')
著者Schindelin, H, Zhang, M, Bald, R, Fuerste, J.-P, Erdmann, V.A, Heinemann, U.
登録日1994-12-11
公開日1995-02-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of an RNA dodecamer containing the Escherichia coli Shine-Dalgarno sequence.
J.Mol.Biol., 249, 1995
1S0M
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BU of 1s0m by Molmil
Crystal structure of a Benzo[a]pyrene Diol Epoxide adduct in a ternary complex with a DNA polymerase
分子名称: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*T)-3', ...
著者Ling, H, Sayer, J.M, Boudsocq, F, Plosky, B.S, Woodgate, R, Yang, W.
登録日2003-12-31
公開日2004-03-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of a benzo[a]pyrene diol epoxide adduct in a ternary complex with a DNA polymerase.
Proc.Natl.Acad.Sci.USA, 101, 2004
7MY4
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BU of 7my4 by Molmil
Crystal Structure of the SPA17 Docking and Dimerization Domain from Danio rerio
分子名称: Sperm autoantigenic protein 17
著者Dahlin, H.R, Zheng, N.
登録日2021-05-20
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Beyond PKA: Evolutionary and structural insights that define a docking and dimerization domain superfamily.
J.Biol.Chem., 297, 2021
1RYR
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BU of 1ryr by Molmil
REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION
分子名称: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3', 5'-D(*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
著者Ling, H, Boudsocq, F, Plosky, B, Woodgate, R, Yang, W.
登録日2003-12-22
公開日2004-02-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Replication of a Cis-Syn Thymine Dimer at Atomic Resolution
Nature, 424, 2003
1S10
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Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2004-01-05
公開日2004-03-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1S0N
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BU of 1s0n by Molmil
Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*AP*CP*G)-3', 5'-D(*TP*AP*CP*GP*AP*CP*GP*TP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2003-12-31
公開日2004-03-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1RYS
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REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION
分子名称: 1,2-ETHANEDIOL, 5'-D(*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*A)-3', 5'-D(*TP*CP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
著者Ling, H, Boudsocq, F, Plosky, B, Woodgate, R, Yang, W.
登録日2003-12-22
公開日2004-02-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Replication of a Cis-Syn Thymine Dimer at Atomic Resolution
Nature, 424, 2003
1S0O
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BU of 1s0o by Molmil
Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
分子名称: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', CALCIUM ION, ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2003-12-31
公開日2004-03-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
8QFW
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BU of 8qfw by Molmil
Murine pyridoxal phosphatase in complex with 7,8-dihydroxyflavone
分子名称: 7,8-bis(oxidanyl)-2-phenyl-chromen-4-one, CITRIC ACID, Chronophin, ...
著者Schindelin, H, Gohla, A.
登録日2023-09-05
公開日2024-06-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献7,8-Dihydroxyflavone is a direct inhibitor of human and murine pyridoxal phosphatase.
Elife, 13, 2024
1JX4
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Crystal Structure of a Y-family DNA Polymerase in a Ternary Complex with DNA Substrates and an Incoming Nucleotide
分子名称: 2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*T*TP*CP*AP*TP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2001-09-05
公開日2001-10-05
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication.
Cell(Cambridge,Mass.), 107, 2001
8VER
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Structure of YicC endoribonuclease
分子名称: Endoribonuclease YicC, SULFATE ION
著者Dahlin, H.R, Khamrui, S, Lazarus, M.B.
登録日2023-12-20
公開日2024-09-04
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into RNA cleavage by a novel family of bacterial RNases.
Nucleic Acids Res., 52, 2024
1JXL
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Crystal Structure of a Y-Family DNA Polymerase in a Ternary Complex with DNA Substrates and an Incoming Nucleotide
分子名称: 1,2-ETHANEDIOL, 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3', ...
著者Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
登録日2001-09-07
公開日2001-10-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication.
Cell(Cambridge,Mass.), 107, 2001
2BOS
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BU of 2bos by Molmil
A MUTANT SHIGA-LIKE TOXIN IIE BOUND TO ITS RECEPTOR
分子名称: N-BUTANE, PROTEIN (SHIGA-LIKE TOXIN IIE B SUBUNIT), alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, ...
著者Ling, H, Boodhoo, A, Armstrong, G.D, Clark, C.G, Brunton, J.L, Read, R.J.
登録日1998-10-20
公開日1999-10-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A mutant Shiga-like toxin IIe bound to its receptor Gb(3): structure of a group II Shiga-like toxin with altered binding specificity.
Structure Fold.Des., 8, 2000
2AGP
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Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*(DOC)-3'), ...
著者Ling, H, Yang, W.
登録日2005-07-27
公開日2005-09-06
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2AGQ
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Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*(DOC))-3', 5'-D(*TP*CP*AP*TP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3', ...
著者Ling, H, Yang, W.
登録日2005-07-27
公開日2005-09-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2AGO
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Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
分子名称: CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*G)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), ...
著者Ling, H, Yang, W.
登録日2005-07-27
公開日2005-09-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2B5E
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Crystal Structure of Yeast Protein Disulfide Isomerase
分子名称: BARIUM ION, GLYCEROL, Protein disulfide-isomerase
著者Schindelin, H, Tian, G.
登録日2005-09-28
公開日2006-01-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of yeast protein disulfide isomerase suggests cooperativity between its active sites.
Cell(Cambridge,Mass.), 124, 2006

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