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PDB: 489 件

2HPG
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The crystal structure of a thermophilic TRAP periplasmic binding protein
分子名称: ABC transporter, periplasmic substrate-binding protein
著者Cuneo, M.J, Hellinga, H.W.
登録日2006-07-17
公開日2007-03-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of a periplasmic binding protein in the tripartite ATP-independent transporter family reveals a tetrameric assembly that may have a role in ligand transport.
J.Biol.Chem., 283, 2008
3HP4
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Crystal structure of psychrotrophic esterase EstA from Pseudoalteromonas sp. 643A inhibited by monoethylphosphonate
分子名称: GDSL-esterase
著者Brzuszkiewicz, A, Nowak, E, Dauter, Z, Dauter, M, Cieslinski, H, Kur, J.
登録日2009-06-03
公開日2009-06-30
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structure of EstA esterase from psychrotrophic Pseudoalteromonas sp. 643A covalently inhibited by monoethylphosphonate.
Acta Crystallogr.,Sect.F, 65, 2009
3Q8P
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Human DNA polymerase iota incorporating dCTP opposite 8-oxo-guanine
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
著者Kirouac, K.N, Ling, H.
登録日2011-01-06
公開日2011-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
3Q8R
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Human DNA polymerase iota incorporating dGTP opposite 8-oxo-guanine
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
著者Kirouac, K.N, Ling, H.
登録日2011-01-06
公開日2011-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
3QE9
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Crystal structure of human exonuclease 1 Exo1 (D173A) in complex with DNA (complex I)
分子名称: CALCIUM ION, DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), ...
著者Orans, J, McSweeney, E.A, Iyer, R.R, Hast, M.A, Hellinga, H.W, Modrich, P, Beese, L.S.
登録日2011-01-20
公開日2011-04-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family.
Cell(Cambridge,Mass.), 145, 2011
4MT7
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Crystal structure of collybistin I
分子名称: Rho guanine nucleotide exchange factor 9
著者Schneeberger, D, Schindelin, H.
登録日2013-09-19
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献A conformational switch in collybistin determines the differentiation of inhibitory postsynapses.
Embo J., 33, 2014
2I74
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Crystal structure of mouse Peptide N-Glycanase C-terminal domain in complex with mannopentaose
分子名称: ACETATE ION, GLYCEROL, PNGase, ...
著者Zhou, X, Zhao, G, Wang, L, Li, G, Lennarz, W.J, Schindelin, H.
登録日2006-08-30
公開日2006-10-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural and biochemical studies of the C-terminal domain of mouse peptide-N-glycanase identify it as a mannose-binding module.
Proc.Natl.Acad.Sci.Usa, 103, 2006
4FBU
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Dpo4 polymerase pre-insertion binary complex with the N-(deoxyguanosin-8-yl)-1-aminopyrene lesion
分子名称: CALCIUM ION, DNA polymerase IV, DNA primer, ...
著者Kirouac, K, Basu, A, Ling, H.
登録日2012-05-23
公開日2013-06-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural mechanism of replication stalling on a bulky amino-polycyclic aromatic hydrocarbon DNA adduct by a y family DNA polymerase.
J.Mol.Biol., 425, 2013
4FBT
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Dpo4 post-insertion complex with the N-(deoxyguanosin-8-yl)-1-aminopyrene lesion
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase IV, ...
著者Kirouac, K, Ling, H.
登録日2012-05-23
公開日2013-06-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural mechanism of replication stalling on a bulky amino-polycyclic aromatic hydrocarbon DNA adduct by a y family DNA polymerase.
J.Mol.Biol., 425, 2013
3Q8S
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Human DNA polymerase iota incorporating dTTP opposite 8-oxo-guanine
分子名称: DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), DNA polymerase iota, ...
著者Kirouac, K.N, Ling, H.
登録日2011-01-06
公開日2011-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Human DNA polymerase iota incorporating dTTP opposite 8-oxo-guanine
To be Published
3QEA
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Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA (complex II)
分子名称: BARIUM ION, DNA (5'-D(P*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), ...
著者Orans, J, McSweeney, E.A, Iyer, R.R, Hast, M.A, Hellinga, H.W, Modrich, P, Beese, L.S.
登録日2011-01-20
公開日2011-04-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family.
Cell(Cambridge,Mass.), 145, 2011
4MT6
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Crystal structure of closed inactive collybistin
分子名称: Rho guanine nucleotide exchange factor 9
著者Schneeberger, D, Schindelin, H.
登録日2013-09-19
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (5.501 Å)
主引用文献A conformational switch in collybistin determines the differentiation of inhibitory postsynapses.
Embo J., 33, 2014
1JWA
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BU of 1jwa by Molmil
Structure of the ATP-bound MoeB-MoaD Protein Complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MOLYBDOPTERIN BIOSYNTHESIS MOEB PROTEIN, MOLYBDOPTERIN [MPT] CONVERTING FACTOR, ...
著者Lake, M.W, Wuebbens, M.M, Rajagopalan, K.V, Schindelin, H.
登録日2001-09-03
公開日2001-11-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Mechanism of ubiquitin activation revealed by the structure of a bacterial MoeB-MoaD complex.
Nature, 414, 2001
3PR4
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Dpo4 Y12A mutant incorporating dADP opposite template dT
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3'), ...
著者Kirouac, K.N, Suo, Z, Ling, H.
登録日2010-11-29
公開日2011-02-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural mechanism of ribonucleotide discrimination by a Y-family DNA polymerase.
J.Mol.Biol., 407, 2011
1G8L
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI MOEA
分子名称: GLYCEROL, MOLYBDOPTERIN BIOSYNTHESIS MOEA PROTEIN
著者Xiang, S, Nichols, J, Rajagopalan, K.V, Schindelin, H.
登録日2000-11-17
公開日2001-05-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The crystal structure of Escherichia coli MoeA and its relationship to the multifunctional protein gephyrin.
Structure, 9, 2001
1G8R
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MOEA
分子名称: GLYCEROL, MOLYBDOPTERIN BIOSYNTHESIS MOEA PROTEIN
著者Xiang, S, Nichols, J, Rajagopalan, K.V, Schindelin, H.
登録日2000-11-20
公開日2001-05-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The crystal structure of Escherichia coli MoeA and its relationship to the multifunctional protein gephyrin.
Structure, 9, 2001
3Q8Q
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Human DNA polymerase iota incorporating dATP opposite 8-oxo-guanine
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
著者Kirouac, K.N, Ling, H.
登録日2011-01-06
公開日2011-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.031 Å)
主引用文献Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
2F4O
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The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs
分子名称: CHLORIDE ION, PHQ-VAL-ALA-ASP-CF0, XP-C repair complementing complex 58 kDa protein, ...
著者Zhao, G, Zhou, X, Wang, L, Kisker, C, Lennarz, W.J, Schindelin, H.
登録日2005-11-23
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structure of the mouse peptide N-glycanase-HR23 complex suggests co-evolution of the endoplasmic reticulum-associated degradation and DNA repair pathways.
J.Biol.Chem., 281, 2006
3QEB
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Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA and Mn2+ (complex III)
分子名称: DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), Exonuclease 1, ...
著者Orans, J, McSweeney, E.A, Iyer, R.R, Hast, M.A, Hellinga, H.W, Modrich, P, Beese, L.S.
登録日2011-01-20
公開日2011-04-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family.
Cell(Cambridge,Mass.), 145, 2011
3I5O
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The X-ray crystal structure of a thermophilic cellobiose binding protein bound with cellopentaose
分子名称: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2009-07-06
公開日2009-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Analysis of Semi-specific Oligosaccharide Recognition by a Cellulose-binding Protein of Thermotoga maritima Reveals Adaptations for Functional Diversification of the Oligopeptide Periplasmic Binding Protein Fold.
J.Biol.Chem., 284, 2009
2FB2
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Structure of the MoaA Arg17/266/268/Ala triple mutant
分子名称: IRON/SULFUR CLUSTER, Molybdenum cofactor biosynthesis protein A, S-ADENOSYLMETHIONINE, ...
著者Haenzelmann, P, Schindelin, H.
登録日2005-12-08
公開日2006-05-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Binding of 5'-GTP to the C-terminal FeS cluster of the radical S-adenosylmethionine enzyme MoaA provides insights into its mechanism
Proc.Natl.Acad.Sci.USA, 103, 2006
1JWB
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BU of 1jwb by Molmil
Structure of the Covalent Acyl-Adenylate Form of the MoeB-MoaD Protein Complex
分子名称: ADENOSINE MONOPHOSPHATE, MOLYBDOPTERIN BIOSYNTHESIS MOEB PROTEIN, MOLYBDOPTERIN [MPT] CONVERTING FACTOR, ...
著者Lake, M.W, Wuebbens, M.M, Rajagopalan, K.V, Schindelin, H.
登録日2001-09-03
公開日2001-11-21
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mechanism of ubiquitin activation revealed by the structure of a bacterial MoeB-MoaD complex.
Nature, 414, 2001
3R3M
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BU of 3r3m by Molmil
Crystal structure of the FAF1 UBX domain
分子名称: FAS-associated factor 1, PHOSPHATE ION
著者Haenzelmann, P, Schindelin, H.
登録日2011-03-16
公開日2011-06-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Hierarchical Binding of Cofactors to the AAA ATPase p97.
Structure, 19, 2011
2F4M
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The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs
分子名称: CHLORIDE ION, UV excision repair protein RAD23 homolog B, ZINC ION, ...
著者Zhao, G, Zhou, X, Wang, L, Kisker, C, Lennarz, W.J, Schindelin, H.
登録日2005-11-23
公開日2006-03-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of the mouse peptide N-glycanase-HR23 complex suggests co-evolution of the endoplasmic reticulum-associated degradation and DNA repair pathways.
J.Biol.Chem., 281, 2006
2GX6
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Rational stabilization of E. coli ribose binding protein
分子名称: D-ribose-binding periplasmic protein, beta-D-ribopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2006-05-08
公開日2007-03-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Rational stabilization of E. coli ribose binding protein
To be Published

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