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PDB: 347 件
4HL6
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YfdE from Escherichia coli
分子名称: Uncharacterized protein YfdE
著者Mullins, E.A, Sullivan, K.L, Nyffeler, K.E, Kappock, T.J.
登録日2012-10-16
公開日2013-05-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Function and X-Ray crystal structure of Escherichia coli YfdE.
Plos One, 8, 2013
3R33
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BU of 3r33 by Molmil
Evidence for dynamic motion in proteins as a mechanism for ligand dissociation
分子名称: (6S)-6-methyl-5,6,7,8-tetrahydroquinazoline-2,4-diamine, CALCIUM ION, CHLORIDE ION, ...
著者Collins, E.J, Lee, A.L, Carroll, M.J, Mauldin, R.V, Gromova, A.V, Singleton, S.F.
登録日2011-03-15
公開日2012-01-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Evidence for dynamics in proteins as a mechanism for ligand dissociation.
Nat.Chem.Biol., 8, 2012
4EU7
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BU of 4eu7 by Molmil
Succinyl-CoA:acetate CoA-transferase (AarCH6) in complex with CoA and citrate
分子名称: CHLORIDE ION, CITRIC ACID, COENZYME A, ...
著者Mullins, E.A, Kappock, T.J.
登録日2012-04-25
公開日2012-10-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structures of Acetobacter aceti Succinyl-Coenzyme A (CoA):Acetate CoA-Transferase Reveal Specificity Determinants and Illustrate the Mechanism Used by Class I CoA-Transferases.
Biochemistry, 51, 2012
4EU4
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BU of 4eu4 by Molmil
Succinyl-CoA: acetate CoA-transferase (AarCH6) in complex with CoA (hexagonal lattice)
分子名称: CHLORIDE ION, COENZYME A, SULFATE ION, ...
著者Mullins, E.A, Kappock, T.J.
登録日2012-04-25
公開日2012-10-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Crystal Structures of Acetobacter aceti Succinyl-Coenzyme A (CoA):Acetate CoA-Transferase Reveal Specificity Determinants and Illustrate the Mechanism Used by Class I CoA-Transferases.
Biochemistry, 51, 2012
2VVP
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BU of 2vvp by Molmil
Crystal structure of Mycobacterium tuberculosis ribose-5-phosphate isomerase B in complex with its substrates ribose 5-phosphate and ribulose 5-phosphate
分子名称: 5-O-phosphono-D-ribose, RIBOSE-5-PHOSPHATE ISOMERASE B, RIBULOSE-5-PHOSPHATE
著者Kowalinski, E, Roos, A.K, Mariano, S, Salmon, L, Mowbray, S.L.
登録日2008-06-10
公開日2008-07-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献D-Ribose-5-Phosphate Isomerase B from Escherichia Coli is Also a Functional D-Allose-6-Phosphate Isomerase, While the Mycobacterium Tuberculosis Enzyme is not.
J.Mol.Biol., 382, 2008
2VVQ
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BU of 2vvq by Molmil
Crystal structure of Mycobacterium tuberculosis ribose-5-phosphate isomerase B in complex with the inhibitor 5-deoxy-5-phospho-D- ribonate
分子名称: 5-O-phosphono-D-ribonic acid, RIBOSE-5-PHOSPHATE ISOMERASE B, SULFATE ION
著者Kowalinski, E, Roos, A.K, Mariano, S, Salmon, L, Mowbray, S.L.
登録日2008-06-10
公開日2008-07-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献D-Ribose-5-Phosphate Isomerase B from Escherichia Coli is Also a Functional D-Allose-6-Phosphate Isomerase, While the Mycobacterium Tuberculosis Enzyme is not.
J.Mol.Biol., 382, 2008
2NCD
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BU of 2ncd by Molmil
NCD (NON-CLARET DISJUNCTIONAL) DIMER FROM D. MELANOGASTER
分子名称: ADENOSINE-5'-DIPHOSPHATE, PROTEIN (Kinesin motor NCD), SULFATE ION
著者Sablin, E.P, Case, R.B, Dai, S.C, Hart, C.L, Ruby, A, Vale, R.D, Fletterick, R.J.
登録日1999-06-04
公開日1999-06-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Direction determination in the minus-end-directed kinesin motor ncd.
Nature, 395, 1998
4AVQ
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BU of 4avq by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease
分子名称: MAGNESIUM ION, MANGANESE (II) ION, POLYMERASE PA
著者Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
登録日2012-05-29
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4AWM
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Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with (-)-epigallocatechin gallate from green tea
分子名称: (2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate, MANGANESE (II) ION, POLYMERASE PA
著者Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
登録日2012-06-04
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4AWK
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BU of 4awk by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with diketo compound 1
分子名称: (2Z)-4-[(3S)-1-(benzylsulfonyl)-3-(4-chlorobenzyl)piperidin-3-yl]-2-hydroxy-4-oxobut-2-enoic acid, MANGANESE (II) ION, POLYMERASE PA
著者Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
登録日2012-06-04
公開日2012-08-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4A2V
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BU of 4a2v by Molmil
Structure of duck RIG-I C-terminal domain (CTD)
分子名称: GLYCEROL, RETINOIC ACID INDUCIBLE PROTEIN I, ZINC ION
著者Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
登録日2011-09-29
公開日2011-10-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
4A2X
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Structure of duck RIG-I C-terminal domain (CTD) with 14-mer dSRNA
分子名称: 5'-R(*CP*GP*CP*GP*UP*UP*GP*UP*UP*CP*UP*CP*CP*CP)-3', 5'-R(*GP*GP*GP*AP*GP*AP*AP*CP*AP*AP*CP*GP*CP*GP)-3', RETINOIC ACID INDUCIBLE PROTEIN I, ...
著者Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
登録日2011-09-29
公開日2011-10-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural basis for the activation of innate immune pattern-recognition receptor RIG-I by viral RNA.
Cell, 147, 2011
4A36
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Structure of duck RIG-I helicase domain bound to 19-mer dsRNA and ATP transition state analogue
分子名称: 5'-R(*GP*CP*AP*UP*GP*CP*GP*AP*CP*CP*UP*CP*UP*GP *UP*UP*UP*GP*A)-3', 5'-R(*UP*CP*AP*AP*AP*CP*AP*GP*AP*GP*GP*UP*CP*GP *CP*AP*UP*GP*C)-3', ADENOSINE-5'-DIPHOSPHATE, ...
著者Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
登録日2011-09-30
公開日2011-10-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
2MGW
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BU of 2mgw by Molmil
Solution Structure of the UBA Domain of Human NBR1
分子名称: Next to BRCA1 gene 1 protein
著者Walinda, E, Morimoto, D, Sugase, K, Komatsu, M, Tochio, H, Shirakawa, M.
登録日2013-11-09
公開日2014-04-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the ubiquitin-associated (UBA) domain of human autophagy receptor NBR1 and its interaction with ubiquitin and polyubiquitin.
J.Biol.Chem., 289, 2014
2MJ5
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BU of 2mj5 by Molmil
Structure of the UBA Domain of Human NBR1 in Complex with Ubiquitin
分子名称: Next to BRCA1 gene 1 protein, Polyubiquitin-C
著者Walinda, E, Morimoto, D, Sugase, K, Komatsu, M, Tochio, H, Shirakawa, M.
登録日2013-12-25
公開日2014-04-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the ubiquitin-associated (UBA) domain of human autophagy receptor NBR1 and its interaction with ubiquitin and polyubiquitin.
J.Biol.Chem., 289, 2014
4AVG
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BU of 4avg by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with diketo compound 2
分子名称: (Z)-4-[4-[(4-chlorophenyl)methyl]-1-(cyclohexylmethyl)piperidin-4-yl]-2-oxidanyl-4-oxidanylidene-but-2-enoic acid, MANGANESE (II) ION, POLYMERASE PA
著者Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
登録日2012-05-25
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4AWG
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BU of 4awg by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with diketo compound 3
分子名称: (2Z)-4-[(3S)-1-benzyl-3-(4-chlorobenzyl)piperidin-3-yl]-2-hydroxy-4-oxobut-2-enoic acid, MANGANESE (II) ION, POLYMERASE PA, ...
著者Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
登録日2012-06-03
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4A2Q
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BU of 4a2q by Molmil
Structure of duck RIG-I tandem CARDs and helicase domain
分子名称: RETINOIC ACID INDUCIBLE PROTEIN I
著者Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
登録日2011-09-28
公開日2011-10-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
4AWF
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BU of 4awf by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with 2 4-dioxo-4-phenylbutanoic acid DPBA
分子名称: 2-4-DIOXO-4-PHENYLBUTANOIC ACID, MANGANESE (II) ION, POLYMERASE PA
著者Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
登録日2012-06-03
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4AWH
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BU of 4awh by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with rUMP
分子名称: MANGANESE (II) ION, POLYMERASE PA, URIDINE-5'-MONOPHOSPHATE
著者Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
登録日2012-06-03
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4AVL
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BU of 4avl by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with dTMP
分子名称: MANGANESE (II) ION, POLYMERASE PA, THYMIDINE-5'-PHOSPHATE
著者Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H.J, Ruigrok, R.W.H, Cusack, S.
登録日2012-05-28
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
2Q8K
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BU of 2q8k by Molmil
The crystal structure of Ebp1
分子名称: GLYCEROL, Proliferation-associated protein 2G4, SULFATE ION
著者Kowalinski, E, Bange, G, Wild, K, Sinning, I.
登録日2007-06-11
公開日2007-09-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The crystal structure of Ebp1 reveals a methionine aminopeptidase fold as binding platform for multiple interactions.
Febs Lett., 581, 2007
4A2P
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Structure of duck RIG-I helicase domain
分子名称: RETINOIC ACID INDUCIBLE PROTEIN I
著者Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
登録日2011-09-28
公開日2011-10-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
4A2W
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Structure of full-length duck RIG-I
分子名称: RETINOIC ACID INDUCIBLE PROTEIN I
著者Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
登録日2011-09-29
公開日2011-10-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
1PK5
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BU of 1pk5 by Molmil
Crystal structure of the orphan nuclear receptor LRH-1
分子名称: Orphan nuclear receptor NR5A2
著者Sablin, E.P, Krylova, I.N, Fletterick, R.J, Ingraham, H.A.
登録日2003-06-04
公開日2003-07-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for ligand-independent activation of the orphan nuclear receptor LRH-1
Mol.Cell, 11, 2003

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