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PDB: 1851 results

2ZX5
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BU of 2zx5 by Molmil
alpha-L-fucosidase complexed with inhibitor, F10
Descriptor: 3-(1H-indol-3-yl)-N-{[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methylpiperidin-2-yl]methyl}propanamide, Alpha-L-fucosidase, putative
Authors:Wu, H.-J, Ko, T.-P, Ho, C.-W, Lin, C.-H, Wang, A.H.-J.
Deposit date:2008-12-19
Release date:2009-12-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis of alpha-fucosidase inhibition by iminocyclitols with K(i) values in the micro- to picomolar range.
Angew.Chem.Int.Ed.Engl., 49, 2010
2ZWZ
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BU of 2zwz by Molmil
alpha-L-fucosidase complexed with inhibitor, Core1
Descriptor: (2R,3R,4R,5R,6S)-2-(aminomethyl)-6-methylpiperidine-3,4,5-triol, Alpha-L-fucosidase, putative
Authors:Wu, H.-J, Ko, T.-P, Ho, C.-W, Lin, C.-H, Wang, A.H.-J.
Deposit date:2008-12-19
Release date:2009-12-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural basis of alpha-fucosidase inhibition by iminocyclitols with K(i) values in the micro- to picomolar range.
Angew.Chem.Int.Ed.Engl., 49, 2010
2ZXD
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BU of 2zxd by Molmil
alpha-L-fucosidase complexed with inhibitor, iso-6FNJ
Descriptor: (2S,3R,4S,5R)-2-(1-methylethyl)piperidine-3,4,5-triol, Alpha-L-fucosidase, putative
Authors:Wu, H.-J, Ko, T.-P, Ho, C.-W, Lin, C.-H, Wang, A.H.-J.
Deposit date:2008-12-22
Release date:2009-12-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis of alpha-fucosidase inhibition by iminocyclitols with K(i) values in the micro- to picomolar range.
Angew.Chem.Int.Ed.Engl., 49, 2010
2ZX7
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BU of 2zx7 by Molmil
alpha-L-fucosidase complexed with inhibitor, F10-2C
Descriptor: Alpha-L-fucosidase, putative, N-{[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methylpiperidin-2-yl]methyl}-1H-indole-2-carboxamide
Authors:Wu, H.-J, Ko, T.-P, Ho, C.-W, Lin, C.-H, Wang, A.H.-J.
Deposit date:2008-12-19
Release date:2009-12-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structural basis of alpha-fucosidase inhibition by iminocyclitols with K(i) values in the micro- to picomolar range.
Angew.Chem.Int.Ed.Engl., 49, 2010
2ZX8
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BU of 2zx8 by Molmil
alpha-L-fucosidase complexed with inhibitor, F10-2C-O
Descriptor: Alpha-L-fucosidase, putative, N-{[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methylpiperidin-2-yl]methyl}-1-benzofuran-2-carboxamide
Authors:Wu, H.-J, Ko, T.-P, Ho, C.-W, Lin, C.-H, Wang, A.H.-J.
Deposit date:2008-12-19
Release date:2009-12-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural basis of alpha-fucosidase inhibition by iminocyclitols with K(i) values in the micro- to picomolar range.
Angew.Chem.Int.Ed.Engl., 49, 2010
5H7W
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BU of 5h7w by Molmil
Crystal structure of 5'-nucleotidase from venom of Naja atra
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ZINC ION, ...
Authors:Chang, C, Lin, C.-C, Wu, W.-G.
Deposit date:2016-11-21
Release date:2017-11-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal strucuture of Taiwan cobra (Naja atra) venom 5'-nucleotidase at 1.9 Angstroms resolution.
To Be Published
2XII
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BU of 2xii by Molmil
CRYSTAL STRUCTURE OF AN ALPHA-L-FUCOSIDASE GH29 FROM BACTEROIDES THETAIOTAOMICRON IN COMPLEX WITH AN EXTENDED 9-FLUORENONE IMINOSUGAR INHIBITOR
Descriptor: 9-oxo-N-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyl-piperidin-2-yl]methyl]fluorene-1-carboxamide, ALPHA-L-FUCOSIDASE, GLYCEROL, ...
Authors:Lammerts van Bueren, A, Popat, S.D, Lin, C.H, Davies, G.J.
Deposit date:2010-06-30
Release date:2010-07-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Thermodynamic Analyses of Alpha-L-Fucosidase Inhibitors.
Chembiochem, 11, 2010
1Y9H
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BU of 1y9h by Molmil
Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement
Descriptor: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 5'-D(*CP*CP*AP*TP*(5CM)P*(BPG)P*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*CP*GP*AP*TP*GP*G)-3'
Authors:Zhang, N, Lin, C, Huang, X, Kolbanovskiy, A, Hingerty, B.E, Amin, S, Broyde, S, Geacintov, N.E, Patel, D.J.
Deposit date:2004-12-15
Release date:2005-03-22
Last modified:2024-04-24
Method:SOLUTION NMR
Cite:Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement.
J.Mol.Biol., 346, 2005
2ZX9
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BU of 2zx9 by Molmil
alpha-L-fucosidase complexed with inhibitor, B4
Descriptor: (2S)-2-cyclopentyl-2-phenyl-N-{[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methylpiperidin-2-yl]methyl}ethanamide, Alpha-L-fucosidase, putative
Authors:Wu, H.-J, Ko, T.-P, Ho, C.-W, Lin, C.-H, Wang, A.H.-J.
Deposit date:2008-12-22
Release date:2009-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural basis of alpha-fucosidase inhibition by iminocyclitols with K(i) values in the micro- to picomolar range.
Angew.Chem.Int.Ed.Engl., 49, 2010
2ZX6
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BU of 2zx6 by Molmil
alpha-L-fucosidase complexed with inhibitor, F10-1C
Descriptor: 2-(1H-indol-3-yl)-N-{[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methylpiperidin-2-yl]methyl}acetamide, Alpha-L-fucosidase, putative
Authors:Wu, H.-J, Ko, T.-P, Ho, C.-W, Lin, C.-H, Wang, A.H.-J.
Deposit date:2008-12-19
Release date:2009-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structural basis of alpha-fucosidase inhibition by iminocyclitols with K(i) values in the micro- to picomolar range.
Angew.Chem.Int.Ed.Engl., 49, 2010
3GBK
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BU of 3gbk by Molmil
Crystal Structure of Human PPAR-gamma Ligand Binding Domain Complexed with a Potent and Selective Agonist
Descriptor: 2-[(1-{3-[4-(biphenyl-4-ylcarbonyl)-2-propylphenoxy]propyl}-1,2,3,4-tetrahydroquinolin-5-yl)oxy]-2-methylpropanoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Peng, Y.-H, Lin, C.-H, Hsieh, H.-P, Wu, S.-Y.
Deposit date:2009-02-19
Release date:2009-12-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design and structural analysis of novel pharmacophores for potent and selective peroxisome proliferator-activated receptor gamma agonists
J.Med.Chem., 52, 2009
7XRS
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BU of 7xrs by Molmil
Crystal structure of SARS-Cov-2 main protease in complex with inhibitor YH-53
Descriptor: N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide, Replicase polyprotein 1a
Authors:Zhou, X.L, Zhong, F.L, Lin, C, Zeng, P, Zhang, J, Li, J.
Deposit date:2022-05-11
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural Basis for the Inhibition of Coronaviral Main Proteases by a Benzothiazole-Based Inhibitor.
Viruses, 14, 2022
7CFW
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BU of 7cfw by Molmil
Crystal structure of the receiver domain of sensor histidine kinase PA1611 (PA1611REC) from Pseudomonas aeruginosa PAO1 with calcium ion coordinated in the active site cleft
Descriptor: CALCIUM ION, Histidine kinase
Authors:Chen, S.K, Guan, H.H, Wu, P.H, Lin, L.T, Wu, M.C, Chang, H.Y, Chen, N.C, Lin, C.C, Chuankhayan, P, Huang, Y.C, Lin, P.J, Chen, C.J.
Deposit date:2020-06-29
Release date:2020-11-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structural insights into the histidine-containing phospho-transfer protein and receiver domain of sensor histidine kinase suggest a complex model in the two-component regulatory system in Pseudomonas aeruginosa
Iucrj, 7, 2020
3EGA
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BU of 3ega by Molmil
Crystal structure of Pellino2 FHA Domain at 1.8 Angstroms resolution
Descriptor: Protein pellino homolog 2, SULFATE ION
Authors:Ferguson, K.M, Lin, C, Schmitz, K.R.
Deposit date:2008-09-10
Release date:2008-12-23
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Pellino proteins contain a cryptic FHA domain that mediates interaction with phosphorylated IRAK1.
Structure, 16, 2008
3PJG
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BU of 3pjg by Molmil
Crystal structure of UDP-glucose dehydrogenase from Klebsiella pneumoniae complexed with product UDP-glucuronic acid
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
Authors:Chen, Y.-Y, Ko, T.-P, Lin, C.-H, Chen, W.-H, Wang, A.H.-J.
Deposit date:2010-11-10
Release date:2011-09-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Conformational change upon product binding to Klebsiella pneumoniae UDP-glucose dehydrogenase: a possible inhibition mechanism for the key enzyme in polymyxin resistance.
J.Struct.Biol., 175, 2011
3PID
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BU of 3pid by Molmil
The apo-form UDP-glucose 6-dehydrogenase with a C-terminal six-histidine tag
Descriptor: UDP-glucose 6-dehydrogenase
Authors:Chen, Y.-Y, Ko, T.-P, Lin, C.-H, Chen, W.-H, Wang, A.H.-J.
Deposit date:2010-11-06
Release date:2011-09-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Conformational change upon product binding to Klebsiella pneumoniae UDP-glucose dehydrogenase: a possible inhibition mechanism for the key enzyme in polymyxin resistance.
J.Struct.Biol., 175, 2011
6JJ0
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BU of 6jj0 by Molmil
NMR structure of the 1:1 complex of a carbazole derivative BMVC bound to c-MYC G-quadruplex
Descriptor: 3,6-bis[(E)-2-(1-methylpyridin-1-ium-4-yl)ethenyl]-9H-carbazole, MycG4
Authors:Liu, W, Lin, C, Yang, D.
Deposit date:2019-02-24
Release date:2019-10-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures of 1:1 and 2:1 complexes of BMVC and MYC promoter G-quadruplex reveal a mechanism of ligand conformation adjustment for G4-recognition.
Nucleic Acids Res., 47, 2019
3PLN
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BU of 3pln by Molmil
Crystal structure of Klebsiella pneumoniae UDP-glucose 6-dehydrogenase complexed with UDP-glucose
Descriptor: UDP-glucose 6-dehydrogenase, URIDINE-5'-MONOPHOSPHATE
Authors:Chen, Y.-Y, Ko, T.-P, Lin, C.-H, Chen, W.-H, Wang, A.H.-J.
Deposit date:2010-11-15
Release date:2011-09-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformational change upon product binding to Klebsiella pneumoniae UDP-glucose dehydrogenase: a possible inhibition mechanism for the key enzyme in polymyxin resistance.
J.Struct.Biol., 175, 2011
8W4L
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BU of 8w4l by Molmil
Crystal structure of closed conformation of human immunoglobulin Fc in presence of EndoSz
Descriptor: CHLORIDE ION, Immunoglobulin gamma-1 heavy chain, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-08-24
Release date:2024-07-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4M
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BU of 8w4m by Molmil
Crystal structure of open conformation of human immunoglobulin Fc in presence of EndoSz
Descriptor: Immunoglobulin gamma-1 heavy chain, ZINC ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-08-24
Release date:2024-07-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4G
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BU of 8w4g by Molmil
Crystal structure of EndoSz mutant D234M, from Streptococcus equi subsp. Zooepidemicus Sz105
Descriptor: CALCIUM ION, glycoside hydrolase
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-08-24
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4N
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BU of 8w4n by Molmil
Crystal structure of EndoSz mutant D234M, in space group P21, in complex with oligosaccharide G2S1
Descriptor: CALCIUM ION, Glycoside hydrolase, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-08-24
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4I
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BU of 8w4i by Molmil
Crystal structure of EndoSz mutant D234M in space group P21
Descriptor: CALCIUM ION, glycoside hydrolase
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-08-24
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
2ZYD
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BU of 2zyd by Molmil
Dimeric 6-phosphogluconate dehydrogenase complexed with glucose
Descriptor: 6-phosphogluconate dehydrogenase, decarboxylating, D-glucose
Authors:Chen, Y.-Y, Ko, T.-P, Lo, L.-P, Lin, C.-H, Wang, A.H.-J.
Deposit date:2009-01-19
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformational changes associated with cofactor/substrate binding of 6-phosphogluconate dehydrogenase from Escherichia coli and Klebsiella pneumoniae: Implications for enzyme mechanism
J.Struct.Biol., 169, 2010
2ZYG
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BU of 2zyg by Molmil
Apo-form of dimeric 6-phosphogluconate dehydrogenase
Descriptor: 6-phosphogluconate dehydrogenase, decarboxylating
Authors:Chen, Y.-Y, Ko, T.-P, Lo, L.-P, Lin, C.-H, Wang, A.H.-J.
Deposit date:2009-01-21
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational changes associated with cofactor/substrate binding of 6-phosphogluconate dehydrogenase from Escherichia coli and Klebsiella pneumoniae: Implications for enzyme mechanism
J.Struct.Biol., 169, 2010

226707

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