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PDB: 923 件

1XGR
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Structure for antibody HyHEL-63 Y33I mutant complexed with hen egg lysozyme
分子名称: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
著者Li, Y, Huang, Y, Swaminathan, C.P, Smith-Gill, S.J, Mariuzza, R.A.
登録日2004-09-17
公開日2005-09-06
最終更新日2013-10-02
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
7BV6
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BU of 7bv6 by Molmil
Crystal structure of the autophagic STX17/SNAP29/VAMP8 SNARE complex
分子名称: Synaptosomal-associated protein 29, Syntaxin-17, Vesicle-associated membrane protein 8
著者Li, Y, Pan, L.F.
登録日2020-04-09
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Decoding three distinct states of the Syntaxin17 SNARE motif in mediating autophagosome-lysosome fusion.
Proc.Natl.Acad.Sci.USA, 117, 2020
1ZGL
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BU of 1zgl by Molmil
Crystal structure of 3A6 TCR bound to MBP/HLA-DR2a
分子名称: HLA class II histocompatibility antigen, DR alpha chain, Myelin basic protein, ...
著者Li, Y, Huang, Y, Lue, J, Quandt, J.A, Martin, R, Mariuzza, R.A.
登録日2005-04-21
公開日2005-10-18
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of a human autoimmune TCR bound to a myelin basic protein self-peptide and a multiple sclerosis-associated MHC class II molecule.
Embo J., 24, 2005
6QPQ
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BU of 6qpq by Molmil
The structure of the cohesin head module elucidates the mechanism of ring opening
分子名称: Sister chromatid cohesion protein 1, Structural maintenance of chromosomes protein,Structural maintenance of chromosomes protein
著者Li, Y, Muir, K.W, Panne, D.
登録日2019-02-14
公開日2020-02-05
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of the cohesin ATPase elucidates the mechanism of SMC-kleisin ring opening.
Nat.Struct.Mol.Biol., 27, 2020
6QNX
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BU of 6qnx by Molmil
Structure of the SA2/SCC1/CTCF complex
分子名称: Cohesin subunit SA-2, Double-strand-break repair protein rad21 homolog, Transcriptional repressor CTCF
著者Li, Y, Muir, K.W, Panne, D.
登録日2019-02-12
公開日2020-01-22
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structural basis for cohesin-CTCF-anchored loops.
Nature, 578, 2020
4G72
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BU of 4g72 by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase mutant V236M from Thermus thermophilus
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
著者Li, Y, Chen, Y, Stout, C.D.
登録日2012-07-19
公開日2013-07-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Structure of Recombinant Cytochrome ba3 Oxidase mutant V236M from Thermus thermophilus
To be Published
4G7Q
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Structure of Recombinant Cytochrome ba3 Oxidase mutant V236L from Thermus thermophilus
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
著者Li, Y, Chen, Y, Stout, C.D.
登録日2012-07-20
公開日2013-07-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of Recombinant Cytochrome ba3 Oxidase mutant V236L from Thermus thermophilus
To be Published
4G7R
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Structure of Recombinant Cytochrome ba3 Oxidase mutant V236A from Thermus thermophilus
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
著者Li, Y, Chen, Y, Stout, C.D.
登録日2012-07-20
公開日2013-07-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structure of Recombinant Cytochrome ba3 Oxidase mutant V236A from Thermus thermophilus
To be Published
4G71
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Structure of Recombinant Cytochrome ba3 Oxidase mutant V236N from Thermus thermophilus
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CU(I)-S-MO(IV)(=O)O-NBIC CLUSTER, Cytochrome c oxidase polypeptide 2A, ...
著者Li, Y, Chen, Y, Stout, C.D.
登録日2012-07-19
公開日2013-07-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of Recombinant Cytochrome ba3 Oxidase mutant V236N from Thermus thermophilus
To be Published
1XGP
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BU of 1xgp by Molmil
Structure for antibody HyHEL-63 Y33A mutant complexed with hen egg lysozyme
分子名称: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
著者Li, Y, Mariuzza, R.A.
登録日2004-09-17
公開日2005-09-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
1XGT
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BU of 1xgt by Molmil
Structure for antibody HyHEL-63 Y33L mutant complexed with hen egg lysozyme
分子名称: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
著者Li, Y, Mariuzza, R.A.
登録日2004-09-17
公開日2005-09-06
最終更新日2013-10-02
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
8F2E
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BU of 8f2e by Molmil
Crystal Structure of the CoV-Y domain of SARS-CoV-2 Nonstructural Protein 3
分子名称: GLYCEROL, Papain-like protease nsp3
著者Li, Y, Shi, W, Hao, B.
登録日2022-11-07
公開日2023-03-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Crystal structure of the CoV-Y domain of SARS-CoV-2 nonstructural protein 3.
Sci Rep, 13, 2023
3JBB
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BU of 3jbb by Molmil
Characterization of red-shifted phycobiliprotein complexes isolated from the chlorophyll f-containing cyanobacterium Halomicronema hongdechloris
分子名称: PHYCOCYANOBILIN, SULFATE ION, allophycocyanin beta chain, ...
著者Li, Y, Lin, Y, Garvey, C, Birch, D, Corkery, R.W, Loughlin, P.C, Scheer, H, Willows, R.D, Chen, M.
登録日2015-08-26
公開日2015-11-11
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (26 Å)
主引用文献Characterization of red-shifted phycobilisomes isolated from the chlorophyll f-containing cyanobacterium Halomicronema hongdechloris.
Biochim.Biophys.Acta, 1857, 2015
1XGQ
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BU of 1xgq by Molmil
Structure for antibody HyHEL-63 Y33V mutant complexed with hen egg lysozyme
分子名称: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
著者Li, Y, Mariuzza, R.A.
登録日2004-09-17
公開日2005-09-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
5VHG
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BU of 5vhg by Molmil
Crystal structure of pentad mutant GAPR-1
分子名称: Golgi-associated plant pathogenesis-related protein 1, SULFATE ION
著者Li, Y, Zhao, Y, Su, M, Chakravarthy, S, Colbert, C.L, Levine, B, Sinha, S.C.
登録日2017-04-13
公開日2017-09-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Structural insights into the interaction of the conserved mammalian proteins GAPR-1 and Beclin 1, a key autophagy protein.
Acta Crystallogr D Struct Biol, 73, 2017
8S1R
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BU of 8s1r by Molmil
Crystal structure of SHANK1 PDZ in complex with a SLiM internal ligand
分子名称: ACETYL GROUP, F-box only protein 41, SH3 and multiple ankyrin repeat domains protein 1
著者Li, Y, Trinh, C.H, Wilson, A.J.
登録日2024-02-15
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.979 Å)
主引用文献Biophysical and Structural Analyses of the Interaction between the SHANK1 PDZ Domain and an Internal SLiM.
Biochem.J., 2024
7UR2
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BU of 7ur2 by Molmil
Crystal structure of the Sec14 domain of the RhoGEF Kalirin
分子名称: Isoform 7 of Kalirin, SULFATE ION
著者Li, Y, Doukov, T.I, Hao, B.
登録日2022-04-21
公開日2023-01-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structure of the Sec14 domain of Kalirin reveals a distinct class of lipid-binding module in RhoGEFs.
Nat Commun, 14, 2023
1KGD
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BU of 1kgd by Molmil
Crystal Structure of the Guanylate Kinase-like Domain of Human CASK
分子名称: FORMIC ACID, PERIPHERAL PLASMA MEMBRANE CASK
著者Li, Y, Spangenberg, O, Paarmann, I, Konrad, M, Lavie, A.
登録日2001-11-26
公開日2001-12-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.314 Å)
主引用文献Structural basis for nucleotide-dependent regulation of membrane-associated guanylate kinase-like domains.
J.Biol.Chem., 277, 2002
1KQL
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BU of 1kql by Molmil
Crystal structure of the C-terminal region of striated muscle alpha-tropomyosin at 2.7 angstrom resolution
分子名称: Fusion Protein of and striated muscle alpha-tropomyosin and the GCN4 leucine zipper
著者Li, Y, Mui, S, Brown, J.H, Strand, J, Reshetnikova, L, Tobacman, L.S, Cohen, C.
登録日2002-01-07
公開日2002-05-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The crystal structure of the C-terminal fragment of striated-muscle alpha-tropomyosin reveals a key troponin T recognition site.
Proc.Natl.Acad.Sci.USA, 99, 2002
8JOL
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BU of 8jol by Molmil
cryo-EM structure of the CED-4/CED-3 holoenzyme
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell death protein 3, Cell death protein 4, ...
著者Li, Y, Tian, L, Zhang, Y, Shi, Y.
登録日2023-06-07
公開日2023-06-28
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into CED-3 activation.
Life Sci Alliance, 6, 2023
3KEA
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BU of 3kea by Molmil
Structure function studies of vaccinia virus host-range protein K1 reveal a novel ankyrin repeat interaction surface for K1s function
分子名称: K1L
著者Li, Y.
登録日2009-10-25
公開日2010-03-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure function studies of vaccinia virus host range protein k1 reveal a novel functional surface for ankyrin repeat proteins.
J.Virol., 84, 2010
8GZ1
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Cryo-EM structure of human NaV1.6/beta1/beta2,apo state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, Sodium channel protein type 8 subunit alpha, ...
著者Li, Y, Jiang, D.
登録日2022-09-24
公開日2023-03-08
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of human Na V 1.6 channel reveals Na + selectivity and pore blockade by 4,9-anhydro-tetrodotoxin.
Nat Commun, 14, 2023
8GZ2
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Cryo-EM structure of human NaV1.6/beta1/beta2-4,9-anhydro-tetrodotoxin
分子名称: (1R,2S,3S,4R,5R,9S,11S,12S,14R)-7-amino-2,4,12-trihydroxy-2-(hydroxymethyl)-10,13,15-trioxa-6,8-diazapentacyclo[7.4.1.1~3,12~.0~5,11~.0~5,14~]pentadec-7-en-8-ium (non-preferred name), 2-acetamido-2-deoxy-beta-D-glucopyranose, Sodium channel protein type 8 subunit alpha, ...
著者Li, Y, Jiang, D.
登録日2022-09-24
公開日2023-03-08
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of human Na V 1.6 channel reveals Na + selectivity and pore blockade by 4,9-anhydro-tetrodotoxin.
Nat Commun, 14, 2023
1DTL
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CRYSTAL STRUCTURE OF CALCIUM-SATURATED (3CA2+) CARDIAC TROPONIN C COMPLEXED WITH THE CALCIUM SENSITIZER BEPRIDIL AT 2.15 A RESOLUTION
分子名称: 1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE, CALCIUM ION, CARDIAC TROPONIN C
著者Li, Y, Love, M.L, Putkey, J.A, Cohen, C.
登録日2000-01-12
公開日2000-05-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Bepridil opens the regulatory N-terminal lobe of cardiac troponin C.
Proc.Natl.Acad.Sci.USA, 97, 2000
7E74
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Crystal structure of ENL YEATS domain T3 mutant in complex with histone H3 acetylation at K27
分子名称: ALA-ALA-ARG-ALY, Protein ENL
著者Li, Y, Li, H.
登録日2021-02-25
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Hotspot mutations in the structured ENL YEATS domain link aberrant transcriptional condensates and cancer.
Mol.Cell, 82, 2022

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件を2024-07-17に公開中

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