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PDB: 653 results

6IY3
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BU of 6iy3 by Molmil
Structure of Snf2-MMTV-A nucleosome complex at shl-2 in ADP state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (147-MER), Histone H2A, ...
Authors:Li, M, Xia, X, Liu, X, Li, X, Chen, Z.
Deposit date:2018-12-12
Release date:2019-04-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Mechanism of DNA translocation underlying chromatin remodelling by Snf2.
Nature, 567, 2019
6IY2
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BU of 6iy2 by Molmil
Structure of Snf2-MMTV-A nucleosome complex at shl2 in ADP state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (147-MER), DNA (167-MER), ...
Authors:Li, M, Xia, X, Liu, X, Li, X, Chen, Z.
Deposit date:2018-12-12
Release date:2019-04-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Mechanism of DNA translocation underlying chromatin remodelling by Snf2.
Nature, 567, 2019
3ZIF
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BU of 3zif by Molmil
Cryo-EM structures of two intermediates provide insight into adenovirus assembly and disassembly
Descriptor: HEXON PROTEIN, PENTON PROTEIN, PIX, ...
Authors:Cheng, L, Huang, X, Li, X, Xiong, W, Sun, W, Yang, C, Zhang, K, Wang, Y, Liu, H, Ji, G, Sun, F, Zheng, C, Zhu, P.
Deposit date:2013-01-09
Release date:2014-01-22
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-Em Structures of Two Bovine Adenovirus Type 3 Intermediates
Virology, 450, 2014
5VBL
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BU of 5vbl by Molmil
Structure of apelin receptor in complex with agonist peptide
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Apelin receptor,Rubredoxin,Apelin receptor Chimera, ZINC ION, ...
Authors:Ma, Y, Yue, Y, Ma, Y, Zhang, Q, Zhou, Q, Song, Y, Shen, Y, Li, X, Ma, X, Li, C, Hanson, M.A, Han, G.W, Sickmier, E.A, Swaminath, G, Zhao, S, Stevems, R.C, Hu, L.A, Zhong, W, Zhang, M, Xu, F.
Deposit date:2017-03-29
Release date:2017-05-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Apelin Control of the Human Apelin Receptor
Structure, 25, 2017
8Y6V
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BU of 8y6v by Molmil
Near-atomic structure of icosahedrally averaged jumbo bacteriophage PhiKZ capsid
Descriptor: gp119, gp120, gp162, ...
Authors:Yang, Y, Shao, Q, Guo, M, Han, L, Zhao, X, Wang, A, Li, X, Wang, B, Pan, J, Chen, Z, Fokine, A, Sun, L, Fang, Q.
Deposit date:2024-02-03
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Capsid structure of bacteriophage Phi KZ provides insights into assembly and stabilization of jumbo phages.
Nat Commun, 15, 2024
6J60
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BU of 6j60 by Molmil
hnRNP A1 reversible amyloid core GFGGNDNFG (residues 209-217)
Descriptor: 9-mer peptide (GFGGNDNFG) from Heterogeneous nuclear ribonucleoprotein A1
Authors:Luo, F, Zhou, H, Gui, X, Li, D, Li, X, Liu, C.
Deposit date:2019-01-12
Release date:2019-04-03
Last modified:2024-03-27
Method:ELECTRON CRYSTALLOGRAPHY (0.96 Å)
Cite:Structural basis for reversible amyloids of hnRNPA1 elucidates their role in stress granule assembly.
Nat Commun, 10, 2019
8Z4L
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BU of 8z4l by Molmil
Cryo-EM structure of CTR-bound type VII CRISPR-Cas complex at substrate-engaged state I
Descriptor: RNA (40-MER), RNA (49-MER), ZINC ION, ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-04-17
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8Z9E
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BU of 8z9e by Molmil
Cryo-EM structure of NTR-bound type VII CRISPR-Cas complex at substrate-engaged state II
Descriptor: Protein structure, RNA (34-MER), RNA (39-MER), ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-04-23
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8Z9C
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BU of 8z9c by Molmil
Cryo-EM structure of NTR-bound type VII CRISPR-Cas complex at substrate-engaged state I
Descriptor: Protein structure, RNA (41-MER), RNA (48-MER), ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-04-23
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8Z99
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BU of 8z99 by Molmil
Cryo-EM structure of NTR-bound type VII CRISPR-Cas complex at substrate-engaged state +I
Descriptor: RNA (49-MER), RNA (54-MER), ZINC ION, ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-04-22
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8YHE
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BU of 8yhe by Molmil
Cryo-EM structure of CTR-bound type VII CRISPR-Cas complex at post-state II
Descriptor: RNA (29-MER), RNA (46-MER), ZINC ION, ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-02-28
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8YHD
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BU of 8yhd by Molmil
Cryo-EM structure of CTR-bound type VII CRISPR-Cas complex at post-state I
Descriptor: RNA (35-MER), RNA (53-MER), ZINC ION, ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-02-28
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8Z4J
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BU of 8z4j by Molmil
Cryo-EM structure of CTR-bound type VII CRISPR-Cas complex at substrate-engaged state II
Descriptor: Protein structure, RNA (34-MER), RNA (38-MER), ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-04-17
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
3P6Y
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BU of 3p6y by Molmil
CF Im25-CF Im68-UGUAA complex
Descriptor: 5'-R(*UP*GP*UP*AP*A)-3', Cleavage and polyadenylation specificity factor subunit 5, Cleavage and polyadenylation specificity factor subunit 6
Authors:Li, H, Tong, S, Li, X, Shi, H, Gao, Y, Ge, H, Niu, L, Teng, M.
Deposit date:2010-10-11
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of pre-mRNA recognition by the human cleavage factor Im complex
To be Published
8DKE
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BU of 8dke by Molmil
Cryo-EM structure of cystinosin in a cytosol-open state
Descriptor: Fab 3H5 Heavy chain, Fab 3H5 Kappa chain, Isoform 2 of Cystinosin
Authors:Schmiege, P, Li, X.
Deposit date:2022-07-05
Release date:2022-09-21
Last modified:2022-10-12
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Structure and mechanism of human cystine exporter cystinosin.
Cell, 185, 2022
8DKW
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BU of 8dkw by Molmil
Cryo-EM structure of cystinosin N288K mutant in a cytosol-open state at pH5.0
Descriptor: Fab 3H5 Heavy Chain, Fab 3H5 Kappa Chain, Isoform 2 of Cystinosin
Authors:Schmiege, P, Li, X.
Deposit date:2022-07-06
Release date:2022-09-21
Last modified:2022-10-12
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structure and mechanism of human cystine exporter cystinosin.
Cell, 185, 2022
8DKI
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BU of 8dki by Molmil
Cryo-EM structure of cystinosin in a lumen-open state
Descriptor: Fab 3H5 Heavy Chain, Fab 3H5 Kappa chain, Isoform 2 of Cystinosin
Authors:Schmiege, P, Li, X.
Deposit date:2022-07-05
Release date:2022-09-21
Last modified:2022-10-12
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structure and mechanism of human cystine exporter cystinosin.
Cell, 185, 2022
8DKX
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BU of 8dkx by Molmil
Cryo-EM structure of cystinosin N288K mutant in a cytosol-open state at pH7.5
Descriptor: Fab 3H5 Heavy Chain, Fab 3H5 Kappa Chain, Isoform 2 of Cystinosin
Authors:Schmiege, P, Li, X.
Deposit date:2022-07-06
Release date:2022-09-21
Last modified:2022-10-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure and mechanism of human cystine exporter cystinosin.
Cell, 185, 2022
8DKM
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BU of 8dkm by Molmil
Cryo-EM structure of cystine-bound cystinosin in a lumen-open state
Descriptor: Fab 3H5 Heavy Chain, Fab 3H5 Kappa chain, Isoform 2 of Cystinosin, ...
Authors:Schmiege, P, Li, X.
Deposit date:2022-07-05
Release date:2022-09-21
Last modified:2022-10-12
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structure and mechanism of human cystine exporter cystinosin.
Cell, 185, 2022
3P5T
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BU of 3p5t by Molmil
CFIm25-CFIm68 complex
Descriptor: Cleavage and polyadenylation specificity factor subunit 5, Cleavage and polyadenylation specificity factor subunit 6
Authors:Li, H, Tong, S, Li, X, Shi, H, Gao, Y, Ge, H, Niu, L, Teng, M.
Deposit date:2010-10-11
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of pre-mRNA recognition by the human cleavage factor Im complex
To be Published
1IAT
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BU of 1iat by Molmil
CRYSTAL STRUCTURE OF HUMAN PHOSPHOGLUCOSE ISOMERASE/NEUROLEUKIN/AUTOCRINE MOTILITY FACTOR/MATURATION FACTOR
Descriptor: BETA-MERCAPTOETHANOL, PHOSPHOGLUCOSE ISOMERASE, SULFATE ION
Authors:Read, J.A, Pearce, J, Li, X, Muirhead, H, Chirgwin, J, Davies, C.
Deposit date:2001-03-23
Release date:2001-05-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The crystal structure of human phosphoglucose isomerase at 1.6 A resolution: implications for catalytic mechanism, cytokine activity and haemolytic anaemia.
J.Mol.Biol., 309, 2001
7SHN
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BU of 7shn by Molmil
Cryo-EM structure of oleoyl-CoA-bound human peroxisomal fatty acid transporter ABCD1
Descriptor: ATP-binding cassette sub-family D member 1, S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name)
Authors:Wang, R, Li, X.
Deposit date:2021-10-09
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of acyl-CoA transport across the peroxisomal membrane by human ABCD1.
Cell Res., 32, 2022
7SHM
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BU of 7shm by Molmil
Cryo-EM structure of ATP-bound human peroxisomal fatty acid transporter ABCD1
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family D member 1
Authors:Wang, R, Li, X.
Deposit date:2021-10-09
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structural basis of acyl-CoA transport across the peroxisomal membrane by human ABCD1.
Cell Res., 32, 2022
4I8B
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BU of 4i8b by Molmil
Crystal Structure of Thioredoxin from Schistosoma Japonicum
Descriptor: Thioredoxin
Authors:Wu, Q, Peng, Y, Zhao, J, Li, X, Fan, X, Zhou, X, Chen, J, Luo, Z, Shi, D.
Deposit date:2012-12-03
Release date:2013-12-04
Last modified:2015-06-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Expression, characterization and crystal structure of thioredoxin from Schistosoma japonicum.
Parasitology, 142, 2015
6A6B
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BU of 6a6b by Molmil
cryo-em structure of alpha-synuclein fiber
Descriptor: Alpha-synuclein
Authors:Li, Y.W, Zhao, C.Y, Luo, F, Liu, Z, Gui, X, Luo, Z, Zhang, X, Li, D, Liu, C, Li, X.
Deposit date:2018-06-27
Release date:2018-07-11
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Amyloid fibril structure of alpha-synuclein determined by cryo-electron microscopy
Cell Res., 28, 2018

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