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PDB: 630 results

5ZL5
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BU of 5zl5 by Molmil
Crystal structure of DFA-IIIase mutant C387A from Arthrobacter chlorophenolicus A6
Descriptor: DFA-IIIase C387A mutant, GLYCEROL
Authors:Yu, S.H, Shen, H, Li, X, Mu, W.M.
Deposit date:2018-03-26
Release date:2018-12-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and functional basis of difructose anhydride III hydrolase, which sequentially converts inulin using the same catalytic residue
Acs Catalysis, 8, 2018
5ZKU
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BU of 5zku by Molmil
Crystal structure of DFA-IIIase from Arthrobacter chlorophenolicus A6 in complex with DFA-III
Descriptor: (2R,3'S,4'S,4aR,5'R,6R,7R,7aS)-4a,5',6-tris(hydroxymethyl)spiro[3,6,7,7a-tetrahydrofuro[2,3-b][1,4]dioxine-2,2'-oxolane ]-3',4',7-triol, DFA-IIIase
Authors:Yu, S.H, Shen, H, Li, X, Mu, W.M.
Deposit date:2018-03-26
Release date:2018-12-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural and functional basis of difructose anhydride III hydrolase, which sequentially converts inulin using the same catalytic residue
Acs Catalysis, 8, 2018
2K3C
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BU of 2k3c by Molmil
Structural and Functional Characterization of TM IX of the NHE1 Isoform of the Na+/H+ Exchanger
Descriptor: TMIX peptide
Authors:Reddy, T, Ding, J, Li, X, Sykes, B.D, Fliegel, L, Rainey, J.K.
Deposit date:2008-05-01
Release date:2008-06-03
Last modified:2020-02-19
Method:SOLUTION NMR
Cite:Structural and Functional Characterization of Transmembrane Segment IX of the NHE1 Isoform of the Na+/H+ Exchanger.
J.Biol.Chem., 283, 2008
7UNE
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BU of 7une by Molmil
The V1 region of bovine V-ATPase in complex with human mEAK7 (focused refinement)
Descriptor: KIAA1609 protein, isoform CRA_a, V-type proton ATPase catalytic subunit A, ...
Authors:Wang, R, Li, X.
Deposit date:2022-04-10
Release date:2022-06-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Molecular basis of mEAK7-mediated human V-ATPase regulation.
Nat Commun, 13, 2022
7UNF
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BU of 7unf by Molmil
CryoEM structure of a mEAK7 bound human V-ATPase complex
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Wang, R, Li, X.
Deposit date:2022-04-10
Release date:2022-06-15
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (4.08 Å)
Cite:Molecular basis of mEAK7-mediated human V-ATPase regulation.
Nat Commun, 13, 2022
2I78
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BU of 2i78 by Molmil
Crystal structure of human dipeptidyl peptidase IV (DPP IV) complexed with ABT-341, a cyclohexene-constrained phenethylamine inhibitor
Descriptor: (1S,6R)-3-{[3-(TRIFLUOROMETHYL)-5,6-DIHYDRO[1,2,4]TRIAZOLO[4,3-A]PYRAZIN-7(8H)-YL]CARBONYL}-6-(2,4,5-TRIFLUOROPHENYL)CYCLOHEX-3-EN-1-AMINE, Dipeptidyl peptidase IV
Authors:Longenecker, K.L, Pei, Z, Li, X.
Deposit date:2006-08-30
Release date:2007-10-09
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of Cyclohexene-constrained Phenethylamine ABT-341, a Highly Potent, Selective, Orally Bioavailable, Safe and Potential Next-generation Dipeptidyl Peptidase IV Inhibitor for the Treatment of Type 2 Diabetes
To be Published
2GVE
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BU of 2gve by Molmil
Time-of-Flight Neutron Diffraction Structure of D-Xylose Isomerase
Descriptor: COBALT (II) ION, Xylose isomerase
Authors:Katz, A.K, Li, X, Carrell, H.L, Hanson, B.L, Langan, P, Coates, L, Schoenborn, B.P, Glusker, J.P, Bunick, G.J.
Deposit date:2006-05-02
Release date:2006-05-16
Last modified:2023-08-30
Method:NEUTRON DIFFRACTION (2.2 Å)
Cite:Locating active-site hydrogen atoms in D-xylose isomerase: Time-of-flight neutron diffraction.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2KBV
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BU of 2kbv by Molmil
Structural and functional analysis of TM XI of the NHE1 isoform of thE NA+/H+ exchanger
Descriptor: Sodium/hydrogen exchanger 1
Authors:Lee, B.L, Li, X, Liu, Y, Sykes, B.D, Fliegel, L.
Deposit date:2008-12-09
Release date:2009-01-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural and Functional Analysis of Transmembrane XI of the NHE1 Isoform of the Na+/H+ Exchanger
J.Biol.Chem., 284, 2009
2GO4
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BU of 2go4 by Molmil
Crystal structure of Aquifex aeolicus LpxC complexed with TU-514
Descriptor: 1,5-ANHYDRO-2-C-(CARBOXYMETHYL-N-HYDROXYAMIDE)-2-DEOXY-3-O-MYRISTOYL-D-GLUCITOL, CHLORIDE ION, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ...
Authors:Gennadios, H.A, Whittington, D.A, Li, X, Fierke, C.A, Christianson, D.W.
Deposit date:2006-04-12
Release date:2006-07-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mechanistic Inferences from the Binding of Ligands to LpxC, a Metal-Dependent Deacetylase
Biochemistry, 45, 2006
8IZB
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BU of 8izb by Molmil
Lysophosphatidylserine receptor GPR174-Gs complex
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Gong, W, Liu, G, Li, X, Zhang, X.
Deposit date:2023-04-06
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Structural basis for ligand recognition and signaling of the lysophosphatidylserine receptors GPR34 and GPR174.
Plos Biol., 21, 2023
8J00
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BU of 8j00 by Molmil
Human KCNQ2-CaM in complex with CBD
Descriptor: Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 2, cannabidiol
Authors:Ma, D, Li, X, Guo, J.
Deposit date:2023-04-09
Release date:2023-11-29
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Ligand activation mechanisms of human KCNQ2 channel.
Nat Commun, 14, 2023
8IZY
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BU of 8izy by Molmil
Human KCNQ2-CaM in complex with HN37
Descriptor: Potassium voltage-gated channel subfamily KQT member 2, methyl N-[4-[(4-fluorophenyl)methyl-prop-2-ynyl-amino]-2,6-dimethyl-phenyl]carbamate
Authors:Ma, D, Li, X, Guo, J.
Deposit date:2023-04-09
Release date:2023-11-29
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Ligand activation mechanisms of human KCNQ2 channel.
Nat Commun, 14, 2023
8J05
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BU of 8j05 by Molmil
Human KCNQ2-CaM complex in the presence of PIP2
Descriptor: Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 2
Authors:Ma, D, Li, X, Guo, J.
Deposit date:2023-04-09
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Ligand activation mechanisms of human KCNQ2 channel.
Nat Commun, 14, 2023
8J04
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BU of 8j04 by Molmil
Human KCNQ2-CaM-HN37 complex in the presence of PIP2
Descriptor: Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 2, methyl N-[4-[(4-fluorophenyl)methyl-prop-2-ynyl-amino]-2,6-dimethyl-phenyl]carbamate
Authors:Ma, D, Li, X, Guo, J.
Deposit date:2023-04-09
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Ligand activation mechanisms of human KCNQ2 channel.
Nat Commun, 14, 2023
8J02
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BU of 8j02 by Molmil
Human KCNQ2(F104A)-CaM-PIP2-CBD complex in state II
Descriptor: Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 2, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate, ...
Authors:Ma, D, Li, X, Guo, J.
Deposit date:2023-04-09
Release date:2023-12-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Ligand activation mechanisms of human KCNQ2 channel.
Nat Commun, 14, 2023
8J01
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BU of 8j01 by Molmil
Human KCNQ2-CaM in complex with CBD and PIP2
Descriptor: Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 2, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate, ...
Authors:Ma, D, Li, X, Guo, J.
Deposit date:2023-04-09
Release date:2023-12-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Ligand activation mechanisms of human KCNQ2 channel.
Nat Commun, 14, 2023
8IZ4
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BU of 8iz4 by Molmil
Lysophosphatidylserine receptor GPR34-Gi complex
Descriptor: Antibody fragment scFv16, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Gong, W, Liu, G, Li, X, Zhang, X.
Deposit date:2023-04-06
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structural mechanisms of ligand binding and signaling in lysophosphatidylserine receptors
To Be Published
8JCB
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BU of 8jcb by Molmil
Vgamma5 Vdelta1 T cell receptor complex
Descriptor: T cell receptor delta variable 1,T cell receptor delta constant, T cell receptor gamma variable 5,T cell receptor gamma constant 1, T-cell surface glycoprotein CD3 delta chain, ...
Authors:Xin, W, Huang, B, Chi, X, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
Deposit date:2023-05-10
Release date:2024-05-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
8JC0
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BU of 8jc0 by Molmil
V gamma9 V delta2 TCR and CD3 complex in LMNG
Descriptor: CHOLESTEROL, T cell receptor delta variable 2,T cell receptor delta constant, T cell receptor gamma variable 9,T cell receptor gamma constant 1, ...
Authors:Xin, W, Huang, B, Chi, X, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
Deposit date:2023-05-10
Release date:2024-05-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
2GO3
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BU of 2go3 by Molmil
Crystal structure of Aquifex aeolicus LpxC complexed with imidazole.
Descriptor: CHLORIDE ION, GLYCEROL, IMIDAZOLE, ...
Authors:Gennadios, H.A, Whittington, D.A, Li, X, Fierke, C.A, Christianson, D.W.
Deposit date:2006-04-12
Release date:2006-07-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanistic Inferences from the Binding of Ligands to LpxC, a Metal-Dependent Deacetylase
Biochemistry, 45, 2006
7EXT
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BU of 7ext by Molmil
Cryo-EM structure of cyanobacterial phycobilisome from Synechococcus sp. PCC 7002
Descriptor: Allophycocyanin alpha subunit, Allophycocyanin beta subunit, Allophycocyanin subunit alpha-B, ...
Authors:Zheng, L, Zheng, Z, Li, X, Wang, G, Zhang, K, Wei, P, Zhao, J, Gao, N.
Deposit date:2021-05-28
Release date:2021-10-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insight into the mechanism of energy transfer in cyanobacterial phycobilisomes.
Nat Commun, 12, 2021
7EYD
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BU of 7eyd by Molmil
Cryo-EM structure of cyanobacterial phycobilisome from Anabaena sp. PCC 7120
Descriptor: Allophycocyanin subunit alpha 1, Allophycocyanin subunit alpha-B, Allophycocyanin subunit beta, ...
Authors:Zheng, L, Zheng, Z, Li, X, Wang, G, Zhang, K, Wei, P, Zhao, J, Gao, N.
Deposit date:2021-05-30
Release date:2021-10-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural insight into the mechanism of energy transfer in cyanobacterial phycobilisomes.
Nat Commun, 12, 2021
4IF2
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BU of 4if2 by Molmil
Structure of the phosphotriesterase from Mycobacterium tuberculosis
Descriptor: Phosphotriesterase homology protein, ZINC ION
Authors:Zhang, L, Li, X, Rao, Z.H.
Deposit date:2012-12-13
Release date:2013-12-18
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:The crystal structure of the phosphotriesterase from M. tuberculosis, another member of phosphotriesterase-like lactonase family.
Biochem.Biophys.Res.Commun., 510, 2019
7F7G
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BU of 7f7g by Molmil
a linear Peptide Inhibitors in complex with GK domain
Descriptor: DLG4 GK domain, UNK-ARG-ILE-ARG-ARG-ASP-GLU-TYR-LEU-LYS-ALA-ILE-GLN-UNK
Authors:Shang, Y, Huang, X, Li, X, Zhang, M.
Deposit date:2021-06-29
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.446 Å)
Cite:Entropy of stapled peptide inhibitors in free state is the major contributor to the improvement of binding affinity with the GK domain.
Rsc Chem Biol, 2, 2021
7CLA
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BU of 7cla by Molmil
Crystal structure of HTH-type transcriptional regulator SkgA from Caulobacter crescentus
Descriptor: HTH-type transcriptional regulator SkgA
Authors:Jiang, X, Zhang, L, Teng, M, Li, X.
Deposit date:2020-07-20
Release date:2020-10-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Antibiotic binding releases autoinhibition of the TipA multidrug-resistance transcriptional regulator.
J.Biol.Chem., 295, 2020

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