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PDB: 477 results

7XRP
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BU of 7xrp by Molmil
Cryo-EM structure of SARS-CoV-2 spike protein in complex with nanobody C5G2 (localized refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, C5G2 nanobody, Spike protein S1
Authors:Liu, L, Sun, H, Jiang, Y, Liu, X, Zhao, D, Zheng, Q, Li, S, Xia, N.
Deposit date:2022-05-11
Release date:2022-10-05
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:A potent synthetic nanobody with broad-spectrum activity neutralizes SARS-CoV-2 virus and the Omicron variant BA.1 through a unique binding mode.
J Nanobiotechnology, 20, 2022
8YG8
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BU of 8yg8 by Molmil
The early intermediate structure of baculovirus fusion protein GP64
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Major envelope glycoprotein
Authors:Du, D, Guo, J, Li, S.
Deposit date:2024-02-26
Release date:2024-09-11
Last modified:2024-09-18
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structural transition of GP64 triggered by a pH-sensitive multi-histidine switch.
Nat Commun, 15, 2024
8YG6
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BU of 8yg6 by Molmil
The pre-fusion structure of baculovirus fusion protein GP64
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Major envelope glycoprotein
Authors:Du, D, Guo, J, Li, S.
Deposit date:2024-02-26
Release date:2024-09-11
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Structural transition of GP64 triggered by a pH-sensitive multi-histidine switch.
Nat Commun, 15, 2024
6TCL
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BU of 6tcl by Molmil
Photosystem I tetramer
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Chen, M, Perez-Boerema, A, Li, S, Amunts, A.
Deposit date:2019-11-06
Release date:2020-02-19
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Distinct structural modulation of photosystem I and lipid environment stabilizes its tetrameric assembly.
Nat.Plants, 6, 2020
5V9U
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BU of 5v9u by Molmil
Crystal Structure of small molecule ARS-1620 covalently bound to K-Ras G12C
Descriptor: (S)-1-{4-[6-chloro-8-fluoro-7-(2-fluoro-6-hydroxyphenyl)quinazolin-4-yl] piperazin-1-yl}propan-1-one, CALCIUM ION, GLYCEROL, ...
Authors:Janes, M.R, Zhang, J, Li, L.-S, Hansen, R, Peters, U, Guo, X, Chen, Y, Babbar, A, Firdaus, S.J, Feng, J, Chen, J.H, Li, S, Brehmer, D, Darjania, L, Li, S, Long, Y.O, Thach, C, Liu, Y, Zarieh, A, Ely, T, Kucharski, J.M, Kessler, L.V, Wu, T, Wang, Y, Yao, Y, Deng, X, Zarrinkar, P, Dashyant, D, Lorenzi, M.V, Hu-Lowe, D, Patricelli, M.P, Ren, P, Liu, Y.
Deposit date:2017-03-23
Release date:2018-02-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Targeting KRAS Mutant Cancers with a Covalent G12C-Specific Inhibitor.
Cell, 172, 2018
1J4I
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BU of 1j4i by Molmil
crystal structure analysis of the FKBP12 complexed with 000308 small molecule
Descriptor: 4-METHYL-2-{[4-(TOLUENE-4-SULFONYL)-THIOMORPHOLINE-3-CARBONYL]-AMINO}-PENTANOIC ACID, FKBP12
Authors:Li, P, Ding, Y, Wang, L, Wu, B, Shu, C, Li, S, Shen, B, Rao, Z.
Deposit date:2001-09-30
Release date:2003-06-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design and structure-based study of new potential FKBP12 inhibitors.
Biophys.J., 85, 2003
8K93
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BU of 8k93 by Molmil
CryoEM structure of LonC protease S582A open hexamer with lysozyme
Descriptor: Endopeptidase La, Monothiophosphate
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8K97
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BU of 8k97 by Molmil
CryoEM structure of LonC protease hexamer with Bortezomib
Descriptor: N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, PHOSPHATE ION, endopeptidase La
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
1J4H
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BU of 1j4h by Molmil
crystal structure analysis of the FKBP12 complexed with 000107 small molecule
Descriptor: 3-PHENYL-2-{[4-(TOLUENE-4-SULFONYL)-THIOMORPHOLINE-3-CARBONYL]-AMINO}-PROPIONIC ACID ETHYL ESTER, FKBP12
Authors:Li, P, Ding, Y, Wang, L, Wu, B, Shu, C, Li, S, Shen, B, Rao, Z.
Deposit date:2001-09-30
Release date:2003-06-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design and structure-based study of new potential FKBP12 inhibitors.
Biophys.J., 85, 2003
8K8Y
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BU of 8k8y by Molmil
CryoEM structure of LonC heptamer in presence of AGS
Descriptor: Monothiophosphate, endopeptidase La
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8K8X
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BU of 8k8x by Molmil
CryoEM of LonC open pentamer, apo state
Descriptor: endopeptidase La
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8K96
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BU of 8k96 by Molmil
CryoEM structure of LonC protease hepatmer with Bortezomib
Descriptor: N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, PHOSPHATE ION, endopeptidase La
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8K92
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BU of 8k92 by Molmil
CryoEM structure of LonC S582A hexamer with Lysozyme
Descriptor: Endopeptidase La, Monothiophosphate
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8K8V
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BU of 8k8v by Molmil
CryoEM structure of LonC protease hepatmer, apo state
Descriptor: PHOSPHATE ION, endopeptidase La
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8K90
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BU of 8k90 by Molmil
CryoEM structure of LonC protease open pentamer in presence of AGS
Descriptor: Monothiophosphate, endopeptidase La
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8XVB
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BU of 8xvb by Molmil
Cryo-EM structure of ATP-DNA-MuB filaments
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent target DNA activator B, DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), ...
Authors:Zhao, X, Zhang, K, Li, S.
Deposit date:2024-01-14
Release date:2024-08-14
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Elucidating the Architectural dynamics of MuB filaments in bacteriophage Mu DNA transposition
Nat Commun, 15, 2024
8XVC
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BU of 8xvc by Molmil
CryoEM structure of ADP-DNA-MuB conformation1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent target DNA activator B
Authors:Zhao, X, Zhang, K, Li, S.
Deposit date:2024-01-14
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (4.32 Å)
Cite:Elucidating the Architectural dynamics of MuB filaments in bacteriophage Mu DNA transposition.
Nat Commun, 15, 2024
8K8Z
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BU of 8k8z by Molmil
CryoEM structure of LonC protease hexamer in presence of AGS
Descriptor: Monothiophosphate, endopeptidase La
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8K95
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BU of 8k95 by Molmil
CryoEM structure of LonC protease open Hexamer, AGS
Descriptor: Monothiophosphate, endopeptidase La
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8K8W
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BU of 8k8w by Molmil
CryoEM structure of LonC protease open hexamer, apo state
Descriptor: endopeptidase La
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8K91
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BU of 8k91 by Molmil
CryoEM structure of LonC S582A hepatmer with Lysozyme
Descriptor: Endopeptidase La, Monothiophosphate
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8K94
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BU of 8k94 by Molmil
CryoEM structure of LonC protease S582A open pentamer with lysozyme
Descriptor: Endopeptidase La, Monothiophosphate
Authors:Li, M, Hsieh, K, Liu, H, Zhang, S, Gao, Y, Gong, Q, Zhang, K, Chang, C, Li, S.
Deposit date:2023-07-31
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis
Fundam Res, 2024
8XVD
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BU of 8xvd by Molmil
CryoEM structure of ADP-DNA-MuB conformation2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent target DNA activator B
Authors:Zhao, X, Zhang, K, Li, S.
Deposit date:2024-01-14
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (4.43 Å)
Cite:Elucidating the Architectural dynamics of MuB filaments in bacteriophage Mu DNA transposition.
Nat Commun, 15, 2024
8YTJ
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BU of 8ytj by Molmil
Cryo-EM structure of enterovirus A71 mature virion
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Jiang, Y, Huang, Y, Zhu, R, Zheng, Q, Li, S, Xia, N.
Deposit date:2024-03-26
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Cryo-EM structure of enterovirus A71 mature virion in complex with Fab h1A6.2
To Be Published
8YTB
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BU of 8ytb by Molmil
Cryo-EM structure of enterovirus A71 empty particle
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3
Authors:Jiang, Y, Huang, Y, Zhu, R, Zheng, Q, Li, S, Xia, N.
Deposit date:2024-03-25
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Cryo-EM structure of enterovirus A71 empty particle
To Be Published

226707

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