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PDB: 456 件

3EO9
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BU of 3eo9 by Molmil
Crystal structure the Fab fragment of Efalizumab
分子名称: Efalizumab Fab fragment, heavy chain, light chain
著者Li, S, Ding, J.
登録日2008-09-26
公開日2009-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Efalizumab binding to the LFA-1 alphaL I domain blocks ICAM-1 binding via steric hindrance.
Proc.Natl.Acad.Sci.USA, 106, 2009
6PMO
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BU of 6pmo by Molmil
Co-crystal structure of the Geobacillus kaustophilus glyQ T-box riboswitch discriminator domain in complex with tRNA-Gly
分子名称: IRIDIUM ION, MAGNESIUM ION, T-box riboswitch discriminator, ...
著者Li, S, Zhang, J.
登録日2019-07-02
公開日2019-11-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65703368 Å)
主引用文献Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions.
Nat.Struct.Mol.Biol., 26, 2019
1I8Q
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BU of 1i8q by Molmil
CRYSTAL STRUCTURE OF STREPTOCOCCUS AGALACTIAE HYALURONATE LYASE COMPLEXED WITH ENZYME PRODUCT, UNSATURATED DISACCHARIDE HYALURONAN
分子名称: 4-deoxy-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, HYALURONATE LYASE
著者Li, S, Jedrzejas, M.J.
登録日2001-03-15
公開日2002-01-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Hyaluronan binding and degradation by Streptococcus agalactiae hyaluronate lyase.
J.Biol.Chem., 276, 2001
6POM
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Cryo-EM structure of the full-length Bacillus subtilis glyQS T-box riboswitch in complex with tRNA-Gly
分子名称: T-box GlyQS leader (155-MER), tRNAGly (75-MER)
著者Li, S, Su, Z, Zhang, J, Chiu, W.
登録日2019-07-04
公開日2019-11-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions.
Nat.Struct.Mol.Biol., 26, 2019
1LPL
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Structural Genomics of Caenorhabditis elegans: CAP-Gly domain of F53F4.3
分子名称: Hypothetical 25.4 kDa protein F53F4.3 in chromosome V
著者Li, S, Finley, J, Liu, Z.-J, Qiu, S.H, Luan, C.H, Carson, M, Tsao, J, Johnson, D, Lin, G, Zhao, J, Thomas, W, Nagy, L.A, Sha, B, DeLucas, L.J, Wang, B.-C, Luo, M, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2002-05-08
公開日2002-05-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal Structure of the Cytoskeleton-associated Protein Glycine-rich (CAP-Gly) Domain
J.Biol.Chem., 277, 2002
1EGU
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BU of 1egu by Molmil
CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE HYALURONATE LYASE AT 1.56 A RESOLUTION
分子名称: HYALURONATE LYASE, SULFATE ION
著者Li, S, Kelly, S.J, Lamani, E, Ferraroni, M, Jedrzejas, M.J.
登録日2000-02-16
公開日2001-02-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural basis of hyaluronan degradation by Streptococcus pneumoniae hyaluronate lyase.
EMBO J., 19, 2000
7YPJ
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BU of 7ypj by Molmil
Spiral pentamer of the substrate-free Lon protease with a S678A mutation
分子名称: ADENOSINE-5'-DIPHOSPHATE, Lon protease
著者Li, S, Hsieh, K.Y, Kuo, C.I, Lee, S.H, Ho, M.R, Wang, C.H, Zhang, K, Chang, C.I.
登録日2022-08-03
公開日2023-10-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023
7YPI
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Spiral hexamer of the substrate-free Lon protease with a Y224S mutation
分子名称: Lon protease, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Li, S, Hsieh, K.Y, Kuo, C.I, Lee, S.H, Ho, M.R, Wang, C.H, Zhang, K, Chang, C.I.
登録日2022-08-03
公開日2023-10-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023
7YPH
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Open-spiral pentamer of the substrate-free Lon protease with a Y224S mutation
分子名称: Lon protease, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Li, S, Hsieh, K.Y, Kuo, C.I, Lee, S.H, Ho, M.R, Wang, C.H, Zhang, K, Chang, C.I.
登録日2022-08-03
公開日2023-10-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023
7YPK
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BU of 7ypk by Molmil
Close-ring hexamer of the substrate-bound Lon protease with an S678A mutation
分子名称: ADENOSINE-5'-DIPHOSPHATE, Lon protease, alpha-S1-casein
著者Li, S, Hsieh, K.Y, Kuo, C.I, Lee, S.H, Ho, M.R, Wang, C.H, Zhang, K, Chang, C.I.
登録日2022-08-03
公開日2023-10-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023
1F1S
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BU of 1f1s by Molmil
CRYSTAL STRUCTURE OF STREPTOCOCCUS AGALACTIAE HYALURONATE LYASE AT 2.1 ANGSTROM RESOLUTION.
分子名称: HYALURONATE LYASE
著者Li, S, Jedrzejas, M.J.
登録日2000-05-19
公開日2002-01-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Hyaluronan binding and degradation by Streptococcus agalactiae hyaluronate lyase.
J.Biol.Chem., 276, 2001
1F9G
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BU of 1f9g by Molmil
CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE HYALURONATE LYASE COCRYSTALLIZED WITH ASCORBIC ACID
分子名称: ASCORBIC ACID, HYALURONATE LYASE
著者Li, S, Jedrzejas, M.J.
登録日2000-07-10
公開日2001-05-16
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Vitamin C inhibits the enzymatic activity of Streptococcus pneumoniae hyaluronate lyase.
J.Biol.Chem., 276, 2001
1P14
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BU of 1p14 by Molmil
Crystal structure of a catalytic-loop mutant of the insulin receptor tyrosine kinase
分子名称: insulin receptor
著者Li, S, Covino, N.D, Stein, E.G, Till, J.H, Hubbard, S.R.
登録日2003-04-11
公開日2003-07-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and biochemical evidence for an autoinhibitory role for tyrosine 984 in the juxtamembrane region of the insulin receptor
J.Biol.Chem., 278, 2003
4GXL
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BU of 4gxl by Molmil
The crystal structure of Galectin-8 C-CRD in complex with NDP52
分子名称: GLYCEROL, Galectin-8, Peptide from Calcium-binding and coiled-coil domain-containing protein 2
著者Li, S, Wandel, M.P, Li, F, Liu, Z, He, C, Wu, J, Shi, Y, Randow, F.
登録日2012-09-04
公開日2013-05-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.023 Å)
主引用文献Sterical hindrance promotes selectivity of the autophagy cargo receptor NDP52 for the danger receptor galectin-8 in antibacterial autophagy
Sci.Signal., 6, 2013
5HH7
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BU of 5hh7 by Molmil
crystal structure of Arabidopsis ORC1b BAH-PHD cassette in complex with unmodified H3 peptide
分子名称: Histone H3 1-15 peptide, Origin of replication complex subunit 1B, ZINC ION
著者Li, S, Du, J.
登録日2016-01-10
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Structural Basis for the Unique Multivalent Readout of Unmodified H3 Tail by Arabidopsis ORC1b BAH-PHD Cassette
Structure, 24, 2016
5IX2
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BU of 5ix2 by Molmil
Crystal structure of mouse Morc3 ATPase-CW cassette in complex with AMPPNP and unmodified H3 peptide
分子名称: MAGNESIUM ION, MORC family CW-type zinc finger protein 3, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Li, S, Du, J, Patel, D.J.
登録日2016-03-23
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Mouse MORC3 is a GHKL ATPase that localizes to H3K4me3 marked chromatin
Proc.Natl.Acad.Sci.USA, 113, 2016
3ZSN
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BU of 3zsn by Molmil
Structure of the mixed-function P450 MycG F286A mutant in complex with mycinamicin IV
分子名称: BENZAMIDINE, GLYCEROL, MYCINAMICIN IV, ...
著者Li, S, Kells, P.M, Rutaganira, F.U, Anzai, Y, Kato, F, Sherman, D.H, Podust, L.M.
登録日2011-06-29
公開日2012-05-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Substrate Recognition by the Multifunctional Cytochrome P450 Mycg in Mycinamicin Hydroxylation and Epoxidation Reactions.
J.Biol.Chem., 287, 2012
5FT2
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BU of 5ft2 by Molmil
Sub-tomogram averaging of Lassa virus glycoprotein spike from virus- like particles at pH 5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PRE-GLYCOPROTEIN POLYPROTEIN GP COMPLEX
著者Li, S, Zhaoyang, S, Pryce, R, Parsy, M.L, Fehling, S.K, Schlie, K, Siebert, C.A, Garten, W, Bowden, T.A, Strecker, T, Huiskonen, J.T.
登録日2016-01-09
公開日2016-03-02
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (16.4 Å)
主引用文献Acidic Ph-Induced Conformations and Lamp1 Binding of the Lassa Virus Glycoprotein Spike.
Plos Pathog., 12, 2016
5IX1
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BU of 5ix1 by Molmil
Crystal structure of mouse Morc3 ATPase-CW cassette in complex with AMPPNP and H3K4me3 peptide
分子名称: MAGNESIUM ION, MORC family CW-type zinc finger protein 3, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Li, S, Du, J, Patel, D.J.
登録日2016-03-23
公開日2016-08-17
最終更新日2016-09-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Mouse MORC3 is a GHKL ATPase that localizes to H3K4me3 marked chromatin
Proc.Natl.Acad.Sci.USA, 113, 2016
5IW5
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BU of 5iw5 by Molmil
Crystal structure of E. coli NudC in complex with NMN
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NADH pyrophosphatase, ZINC ION
著者Li, S, Du, J, Patel, D.J.
登録日2016-03-22
公開日2016-07-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure and function of the bacterial decapping enzyme NudC
Nat.Chem.Biol., 12, 2016
5IW4
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BU of 5iw4 by Molmil
Crystal structure of E. coli NudC in complex with NAD
分子名称: NADH pyrophosphatase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Li, S, Du, J, Patel, D.J.
登録日2016-03-22
公開日2016-07-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and function of the bacterial decapping enzyme NudC.
Nat.Chem.Biol., 12, 2016
2YGX
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BU of 2ygx by Molmil
Structure of the mixed-function P450 MycG in P21 space group
分子名称: GLYCEROL, P-450-LIKE PROTEIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Li, S, Kells, P.M, Rutaganira, F.U, Sherman, D.H, Podust, L.M.
登録日2011-04-22
公開日2012-02-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Substrate Recognition by the Multifunctional Cytochrome P450 Mycg in Mycinamicin Hydroxylation and Epoxidation Reactions.
J.Biol.Chem., 287, 2012
2Y46
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BU of 2y46 by Molmil
Structure of the mixed-function P450 MycG in complex with mycinamicin IV in C 2 2 21 space group
分子名称: BENZAMIDINE, GLYCEROL, MYCINAMICIN IV, ...
著者Li, S, Kells, P.M, Sherman, D.H, Podust, L.M.
登録日2011-01-05
公開日2012-01-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Substrate Recognition by the Multifunctional Cytochrome P450 Mycg in Mycinamicin Hydroxylation and Epoxidation Reactions.
J.Biol.Chem., 287, 2012
2Y5N
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BU of 2y5n by Molmil
Structure of the mixed-function P450 MycG in complex with mycinamicin V in P21 space group
分子名称: GLYCEROL, MAGNESIUM ION, MYCINAMICIN V, ...
著者Li, S, Kells, P.M, Sherman, D.H, Podust, L.M.
登録日2011-01-15
公開日2012-02-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Substrate Recognition by the Multifunctional Cytochrome P450 Mycg in Mycinamicin Hydroxylation and Epoxidation Reactions.
J.Biol.Chem., 287, 2012
1TOV
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BU of 1tov by Molmil
Structural genomics of Caenorhabditis elegans: CAP-GLY domain of F53F4.3
分子名称: Hypothetical protein F53F4.3 in chromosome V, SULFATE ION
著者Li, S, Finley, J, Liu, Z.J, Qiu, S.H, Luan, C.H, Carson, M, Tsao, J, Johnson, D, Lin, G, Zhao, J, Thomas, W, Nagy, L.A, Sha, B, Delucas, L.J, Richardson, D, Richardson, J, Wang, B.C, Luo, M, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-06-15
公開日2004-07-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal Structure of the Cytoskeleton-Associated Protein Glycine-Rich (CAP-Gly) Domain
J.Biol.Chem., 277, 2002

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