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PDB: 157 results

1J4H
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BU of 1j4h by Molmil
crystal structure analysis of the FKBP12 complexed with 000107 small molecule
Descriptor: 3-PHENYL-2-{[4-(TOLUENE-4-SULFONYL)-THIOMORPHOLINE-3-CARBONYL]-AMINO}-PROPIONIC ACID ETHYL ESTER, FKBP12
Authors:Li, P, Ding, Y, Wang, L, Wu, B, Shu, C, Li, S, Shen, B, Rao, Z.
Deposit date:2001-09-30
Release date:2003-06-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design and structure-based study of new potential FKBP12 inhibitors.
Biophys.J., 85, 2003
3LRN
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BU of 3lrn by Molmil
Crystal structure of human RIG-I CTD bound to a 14 bp GC 5' ppp dsRNA
Descriptor: Probable ATP-dependent RNA helicase DDX58, RNA (5'-R(*(GTP)P*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3'), ZINC ION
Authors:Li, P.
Deposit date:2010-02-11
Release date:2010-06-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Structural Basis of 5' Triphosphate Double-Stranded RNA Recognition by RIG-I C-Terminal Domain.
Structure, 18, 2010
7PGE
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BU of 7pge by Molmil
copper transporter PcoB
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Copper resistance protein B, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:Li, P, Gourdon, P.E.
Deposit date:2021-08-13
Release date:2022-07-06
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:PcoB is a defense outer membrane protein that facilitates cellular uptake of copper.
Protein Sci., 31, 2022
7PQX
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BU of 7pqx by Molmil
Structure of CtAtm1 in the inward-facing open conformation
Descriptor: Putative iron-sulfur protein
Authors:Li, P, Wang, K.T, Gourdon, P.E.
Deposit date:2021-09-20
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Structures of Atm1 provide insight into [2Fe-2S] cluster export from mitochondria.
Nat Commun, 13, 2022
7PSD
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BU of 7psd by Molmil
Structure of CtAtm1(E603Q) in the inward-facing open conformation
Descriptor: Putative iron-sulfur protein
Authors:Li, P, Wang, K.T, Gourdon, P.E.
Deposit date:2021-09-22
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structures of Atm1 provide insight into [2Fe-2S] cluster export from mitochondria.
Nat Commun, 13, 2022
7PRO
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BU of 7pro by Molmil
Structure of CtAtm1 in the inward-open with Glutathione-complexed [2Fe-2S] cluster bound
Descriptor: Putative iron-sulfur protein
Authors:Li, P, Wang, K.T, Gourdon, P.E.
Deposit date:2021-09-22
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structures of Atm1 provide insight into [2Fe-2S] cluster export from mitochondria.
Nat Commun, 13, 2022
7PR1
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BU of 7pr1 by Molmil
Structure of CtAtm1 in the occluded conformation with ATP bound
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Putative iron-sulfur protein
Authors:Li, P, Wang, K.T, Gourdon, P.E.
Deposit date:2021-09-20
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Structures of Atm1 provide insight into [2Fe-2S] cluster export from mitochondria.
Nat Commun, 13, 2022
7PRU
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BU of 7pru by Molmil
Structure of CtAtm1 in the inward-facing partially occluded with cargo bound
Descriptor: GLUTATHIONE, Putative iron-sulfur protein
Authors:Li, P, Wang, K.T, Gourdon, P.E.
Deposit date:2021-09-22
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of Atm1 provide insight into [2Fe-2S] cluster export from mitochondria.
Nat Commun, 13, 2022
7OP3
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BU of 7op3 by Molmil
Cryo-EM structure of P5B-ATPase E2PiSPM
Descriptor: Cation-transporting ATPase, SPERMINE
Authors:Li, P, Gronberg, C, Wang, K.T, Salustros, N, Gourdon, P.E.
Deposit date:2021-05-28
Release date:2021-06-30
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and transport mechanism of P5B-ATPases.
Nat Commun, 12, 2021
1J4I
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BU of 1j4i by Molmil
crystal structure analysis of the FKBP12 complexed with 000308 small molecule
Descriptor: 4-METHYL-2-{[4-(TOLUENE-4-SULFONYL)-THIOMORPHOLINE-3-CARBONYL]-AMINO}-PENTANOIC ACID, FKBP12
Authors:Li, P, Ding, Y, Wang, L, Wu, B, Shu, C, Li, S, Shen, B, Rao, Z.
Deposit date:2001-09-30
Release date:2003-06-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design and structure-based study of new potential FKBP12 inhibitors.
Biophys.J., 85, 2003
7OP1
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BU of 7op1 by Molmil
Cryo-EM structure of P5B-ATPase E2PiAlF/SPM
Descriptor: Cation-transporting ATPase, MAGNESIUM ION, SPERMINE, ...
Authors:Li, P, Gourdon, P.
Deposit date:2021-05-28
Release date:2021-06-30
Last modified:2021-09-01
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure and transport mechanism of P5B-ATPases.
Nat Commun, 12, 2021
7OP8
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BU of 7op8 by Molmil
Cryo-EM structure of P5B-ATPase E2Pinhibit
Descriptor: BERYLLIUM TRIFLUORIDE ION, Cation-transporting ATPase, MAGNESIUM ION
Authors:Li, P, Gourdon, P.
Deposit date:2021-05-31
Release date:2021-06-30
Last modified:2021-09-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and transport mechanism of P5B-ATPases.
Nat Commun, 12, 2021
7OP5
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BU of 7op5 by Molmil
Cryo-EM structure of P5B-ATPase E2P
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, P5B-ATPase
Authors:Li, P, Gourdon, P.
Deposit date:2021-05-29
Release date:2021-06-30
Last modified:2021-09-01
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure and transport mechanism of P5B-ATPases.
Nat Commun, 12, 2021
2GSG
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BU of 2gsg by Molmil
Crystal structure of the Fv fragment of a monoclonal antibody specific for poly-glutamine
Descriptor: SULFATE ION, monoclonal antibody heavy chain, monoclonal antibody light chain
Authors:Li, P, Huey-Tubman, K.E, West Jr, A.P, Bennett, M.J, Bjorkman, P.J.
Deposit date:2006-04-26
Release date:2007-04-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of a polyQ-anti-polyQ complex reveals binding according to a linear lattice model.
Nat.Struct.Mol.Biol., 14, 2007
6O8C
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BU of 6o8c by Molmil
Crystal structure of STING CTT in complex with TBK1
Descriptor: N-(3-{[5-iodo-4-({3-[(thiophen-2-ylcarbonyl)amino]propyl}amino)pyrimidin-2-yl]amino}phenyl)pyrrolidine-1-carboxamide, Serine/threonine-protein kinase TBK1, Stimulator of interferon genes protein
Authors:Li, P, Zhao, B, Du, F.
Deposit date:2019-03-09
Release date:2019-05-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:A conserved PLPLRT/SD motif of STING mediates the recruitment and activation of TBK1.
Nature, 569, 2019
5X1T
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BU of 5x1t by Molmil
PpkA-294
Descriptor: ADENOSINE-5'-DIPHOSPHATE, PpkA-294
Authors:Li, P.P, Ran, T.T, Xu, D.Q, Wang, W.W.
Deposit date:2017-01-26
Release date:2018-01-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of the kinase domain of PpkA, a key regulatory component of T6SS, reveal a general inhibitory mechanism.
Biochem.J., 475, 2018
5X1Q
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BU of 5x1q by Molmil
PpkA-294 with ATP and MnCl2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ...
Authors:Li, P.P, Ran, T.T, Xu, D.Q, Wang, W.W.
Deposit date:2017-01-26
Release date:2018-01-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Crystal structures of the kinase domain of PpkA, a key regulatory component of T6SS, reveal a general inhibitory mechanism.
Biochem.J., 475, 2018
5X1S
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BU of 5x1s by Molmil
PpkA-294 with Amppcp
Descriptor: GLYCEROL, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, PpkA
Authors:Li, P.P, Ran, T.T, Xu, D.Q, Wang, W.W.
Deposit date:2017-01-26
Release date:2018-01-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structures of the kinase domain of PpkA, a key regulatory component of T6SS, reveal a general inhibitory mechanism.
Biochem.J., 475, 2018
6O8B
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BU of 6o8b by Molmil
Crystal structure of STING CTD in complex with TBK1
Descriptor: N-(3-{[5-iodo-4-({3-[(thiophen-2-ylcarbonyl)amino]propyl}amino)pyrimidin-2-yl]amino}phenyl)pyrrolidine-1-carboxamide, Serine/threonine-protein kinase TBK1, Stimulator of interferon genes protein
Authors:Li, P, Zhao, B, Du, F.
Deposit date:2019-03-09
Release date:2019-05-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:A conserved PLPLRT/SD motif of STING mediates the recruitment and activation of TBK1.
Nature, 569, 2019
4Q05
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BU of 4q05 by Molmil
Crystal structure of an esterase E25
Descriptor: SODIUM ION, esterase E25
Authors:Li, P.Y, Li, C.Y, Zhang, Y.Z.
Deposit date:2014-03-31
Release date:2014-06-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for dimerization and catalysis of a novel esterase from the GTSAG motif subfamily of the bacterial hormone-sensitive lipase family
J.Biol.Chem., 289, 2014
3EQT
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BU of 3eqt by Molmil
Crystal structure of human LGP2 C-terminal domain in complex with dsRNA
Descriptor: 5'-R(*GP*CP*GP*CP*GP*CP*GP*C)-3', ATP-dependent RNA helicase DHX58, ZINC ION
Authors:Li, P, Li, X.
Deposit date:2008-10-01
Release date:2009-03-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:The RIG-I-like Receptor LGP2 Recognizes the Termini of Double-stranded RNA
J.Biol.Chem., 284, 2009
7JFM
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BU of 7jfm by Molmil
Crystal structure of mouse phosphorylated IRF-3 bound to CBP
Descriptor: CREB-binding protein, Interferon regulatory factor 3
Authors:Li, P, Jing, T, Zhao, B.
Deposit date:2020-07-17
Release date:2020-09-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:The Structural Basis of IRF-3 Activation upon Phosphorylation.
J Immunol., 205, 2020
6J76
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BU of 6j76 by Molmil
Structure of 3,6-anhydro-L-galactose Dehydrogenase in Complex with NAP
Descriptor: Aldehyde dehydrogenase A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Li, P.Y, Wang, Y, Chen, X.L, Zhang, Y.Z.
Deposit date:2019-01-17
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.368 Å)
Cite:3,6-Anhydro-L-Galactose Dehydrogenase VvAHGD is a Member of a New Aldehyde Dehydrogenase Family and Catalyzes by a Novel Mechanism with Conformational Switch of Two Catalytic Residues Cysteine 282 and Glutamate 248.
J.Mol.Biol., 432, 2020
6J75
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BU of 6j75 by Molmil
Structure of 3,6-anhydro-L-galactose Dehydrogenase
Descriptor: Aldehyde dehydrogenase A
Authors:Li, P.Y, Wang, Y, Chen, X.L, Zhang, Y.Z.
Deposit date:2019-01-17
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.695 Å)
Cite:3,6-Anhydro-L-Galactose Dehydrogenase VvAHGD is a Member of a New Aldehyde Dehydrogenase Family and Catalyzes by a Novel Mechanism with Conformational Switch of Two Catalytic Residues Cysteine 282 and Glutamate 248.
J.Mol.Biol., 432, 2020
5HNV
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BU of 5hnv by Molmil
Crystal structure of PpkA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Li, P.P, Ran, T.T, Wang, W.W.
Deposit date:2016-01-19
Release date:2017-01-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Crystal structures of the kinase domain of PpkA, a key regulatory component of T6SS, reveal a general inhibitory mechanism.
Biochem.J., 475, 2018

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