Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 484 件

6KEW
DownloadVisualize
BU of 6kew by Molmil
Crystal structure of oxidized phosphoribulokinase from Arabidopsis thaliana
分子名称: Phosphoribulokinase
著者Yu, A, Xie, Y, Li, M.
登録日2019-07-05
公開日2020-05-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Photosynthetic Phosphoribulokinase Structures: Enzymatic Mechanisms and the Redox Regulation of the Calvin-Benson-Bassham Cycle.
Plant Cell, 32, 2020
6KEX
DownloadVisualize
BU of 6kex by Molmil
Crystal structure of reduced phosphoribulokinase from Arabidopsis thaliana
分子名称: Phosphoribulokinase
著者Yu, A, Xie, Y, Li, M.
登録日2019-07-05
公開日2020-05-13
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Photosynthetic Phosphoribulokinase Structures: Enzymatic Mechanisms and the Redox Regulation of the Calvin-Benson-Bassham Cycle.
Plant Cell, 32, 2020
7DPV
DownloadVisualize
BU of 7dpv by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with 7-O-methyl-dihydromyricetin
分子名称: (2S,3S)-3,5-dihydroxy-7-methoxy-2-(3,4,5-trihydroxyphenyl)chroman-4-one, 3C-like proteinase
著者Su, H.X, Zhao, W.F, Xie, H, Li, M.J, Xu, Y.C.
登録日2020-12-21
公開日2021-05-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Identification of pyrogallol as a warhead in design of covalent inhibitors for the SARS-CoV-2 3CL protease.
Nat Commun, 12, 2021
7DPP
DownloadVisualize
BU of 7dpp by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with myricetin
分子名称: 3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, 3C-like proteinase
著者Su, H.X, Zhao, W.F, Xie, H, Li, M.J, Xu, Y.C.
登録日2020-12-21
公開日2021-05-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Identification of pyrogallol as a warhead in design of covalent inhibitors for the SARS-CoV-2 3CL protease.
Nat Commun, 12, 2021
7DPU
DownloadVisualize
BU of 7dpu by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with 7-O-methyl-myricetin
分子名称: 3C-like proteinase, 7-methoxy-3,5-bis(oxidanyl)-2-[3,4,5-tris(oxidanyl)phenyl]chromen-4-one, GLYCEROL
著者Su, H.X, Zhao, W.F, Xie, H, Li, M.J, Xu, Y.C.
登録日2020-12-21
公開日2021-05-12
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Identification of pyrogallol as a warhead in design of covalent inhibitors for the SARS-CoV-2 3CL protease.
Nat Commun, 12, 2021
5XNE
DownloadVisualize
BU of 5xne by Molmil
X-ray Crystal Structure of alpha-acetolactate decarboxylase from Bacillus subtilis strain 168
分子名称: Alpha-acetolactate decarboxylase, ZINC ION
著者Ji, F, Li, M, Feng, Y.
登録日2017-05-22
公開日2018-08-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Structural and enzymatic characterization of acetolactate decarboxylase from Bacillus subtilis
Appl. Microbiol. Biotechnol., 102, 2018
6A9W
DownloadVisualize
BU of 6a9w by Molmil
Structure of the bifunctional DNA primase-polymerase from phage NrS-1
分子名称: Primase
著者Guo, H.J, Li, M.J, Wang, T.L, Wu, H, Zhou, H, Xu, C.Y, Liu, X.P, Yu, F, He, J.H.
登録日2018-07-16
公開日2019-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure and biochemical studies of the bifunctional DNA primase-polymerase from phage NrS-1.
Biochem. Biophys. Res. Commun., 510, 2019
5XB0
DownloadVisualize
BU of 5xb0 by Molmil
1.6 A crystal structure of peptidyl-prolyl cis-trans isomerase PPIase from Pseudomonas syringae pv. tomato str. DC3000 (PSPTO DC3000)
分子名称: L(+)-TARTARIC ACID, Peptidyl-prolyl cis-trans isomerase
著者Zhang, H, Gao, Y, Li, M, Chang, W.
登録日2017-03-15
公開日2017-04-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献1.6 A crystal structure of peptidyl-prolyl cis-trans isomerase PPIase from Pseudomonas syringae pv. tomato str. DC3000 (PSPTO DC3000)
To Be Published
7DNC
DownloadVisualize
BU of 7dnc by Molmil
Crystal structure of EV71 3C proteinase in complex with a novel inhibitor
分子名称: 3C protease, ~{N}-[(2~{S})-3-cyclohexyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]propan-2-yl]-1~{H}-indole-2-carboxamide
著者Xie, H, Su, H.X, Li, M.J, Xu, Y.C.
登録日2020-12-09
公開日2021-05-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Design, Synthesis, and Biological Evaluation of Peptidomimetic Aldehydes as Broad-Spectrum Inhibitors against Enterovirus and SARS-CoV-2.
J.Med.Chem., 65, 2022
7DJJ
DownloadVisualize
BU of 7djj by Molmil
Structure of four truncated and mutated forms of quenching protein lumenal domains
分子名称: Protein SUPPRESSOR OF QUENCHING 1, chloroplastic, SODIUM ION, ...
著者Yu, G.M, Pan, X.W, Li, M.
登録日2020-11-20
公開日2022-06-08
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.69806433 Å)
主引用文献Structure of Arabidopsis SOQ1 lumenal region unveils C-terminal domain essential for negative regulation of photoprotective qH.
Nat.Plants, 8, 2022
7DFX
DownloadVisualize
BU of 7dfx by Molmil
Structure and function of Diadenylate cyclase DacM in Mycoplasma ovipneumoniae
分子名称: DAC domain-containing protein, MALONIC ACID
著者Fan, S, Li, M.
登録日2020-11-10
公開日2021-11-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.996 Å)
主引用文献Structure and function of Diadenylate cyclase DacM in Mycoplasma ovipneumoniae
To Be Published
7CXN
DownloadVisualize
BU of 7cxn by Molmil
Architecture of a SARS-CoV-2 mini replication and transcription complex
分子名称: Helicase, Non-structural protein 7, Non-structural protein 8, ...
著者Yan, L, Zhang, Y, Ge, J, Zheng, L, Gao, Y, Wang, T, Jia, Z, Wang, H, Huang, Y, Li, M, Wang, Q, Rao, Z, Lou, Z.
登録日2020-09-02
公開日2020-11-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Architecture of a SARS-CoV-2 mini replication and transcription complex.
Nat Commun, 11, 2020
7DJM
DownloadVisualize
BU of 7djm by Molmil
Structure of four truncated and mutated forms of quenching protein
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ACETATE ION, Protein SUPPRESSOR OF QUENCHING 1, ...
著者Yu, G.M, Pan, X.W, Li, M.
登録日2020-11-20
公開日2022-06-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.70000112 Å)
主引用文献Structure of Arabidopsis SOQ1 lumenal region unveils C-terminal domain essential for negative regulation of photoprotective qH.
Nat.Plants, 8, 2022
7DJK
DownloadVisualize
BU of 7djk by Molmil
Structure of four truncated and mutated forms of quenching protein
分子名称: CHLORIDE ION, Protein SUPPRESSOR OF QUENCHING 1, chloroplastic, ...
著者Yu, G.M, Pan, X.W, Li, M.
登録日2020-11-20
公開日2022-06-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.80145121 Å)
主引用文献Structure of Arabidopsis SOQ1 lumenal region unveils C-terminal domain essential for negative regulation of photoprotective qH.
Nat.Plants, 8, 2022
7DJL
DownloadVisualize
BU of 7djl by Molmil
Structure of four truncated and mutated forms of quenching protein
分子名称: CHLORIDE ION, Protein SUPPRESSOR OF QUENCHING 1, chloroplastic, ...
著者Yu, G.M, Pan, X.W, Li, M.
登録日2020-11-20
公開日2022-06-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.96077824 Å)
主引用文献Structure of Arabidopsis SOQ1 lumenal region unveils C-terminal domain essential for negative regulation of photoprotective qH.
Nat.Plants, 8, 2022
7CXM
DownloadVisualize
BU of 7cxm by Molmil
Architecture of a SARS-CoV-2 mini replication and transcription complex
分子名称: Helicase, Non-structural protein 7, Non-structural protein 8, ...
著者Yan, L, Zhang, Y, Ge, J, Zheng, L, Gao, Y, Wang, T, Jia, Z, Wang, H, Huang, Y, Li, M, Wang, Q, Rao, Z, Lou, Z.
登録日2020-09-02
公開日2020-11-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Architecture of a SARS-CoV-2 mini replication and transcription complex.
Nat Commun, 11, 2020
2XFU
DownloadVisualize
BU of 2xfu by Molmil
Human monoamine oxidase B with tranylcypromine
分子名称: 3-PHENYLPROPANAL, Amine oxidase [flavin-containing] B, [[(2R,3S,4S)-5-[(4AS)-7,8-DIMETHYL-2,4-DIOXO-4A,5-DIHYDROBENZO[G]PTERIDIN-10-YL]-2,3,4-TRIHYDROXY-PENTOXY]-HYDROXY-PHOSPHORYL] [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL HYDROGEN PHOSPHATE
著者Binda, C, Li, M, Hubalek, F, Restelli, N, Edmondson, D.E, Mattevi, A.
登録日2010-05-26
公開日2010-06-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Potentiation of ligand binding through cooperative effects in monoamine oxidase B.
J. Biol. Chem., 285, 2010
7C9V
DownloadVisualize
BU of 7c9v by Molmil
E30 F-particle in complex with FcRn
分子名称: Beta-2-microglobulin, IgG receptor FcRn large subunit p51, MYRISTIC ACID, ...
著者Wang, K, Zhu, L, Sun, Y, Li, M, Zhao, X, Cui, L, Zhang, L, Gao, G, Zhai, W, Zhu, F, Rao, Z, Wang, X.
登録日2020-06-07
公開日2020-07-29
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structures of Echovirus 30 in complex with its receptors inform a rational prediction for enterovirus receptor usage.
Nat Commun, 11, 2020
7C9S
DownloadVisualize
BU of 7c9s by Molmil
Echovirus 30 F-particle
分子名称: SPHINGOSINE, VP1, VP2, ...
著者Wang, K, Sun, Y, Zhu, L, Li, M, Zhao, X, Cui, L, Zhang, L, Gao, G, Zhai, W, Zhu, F, Rao, Z, Wang, X.
登録日2020-06-07
公開日2020-07-29
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structures of Echovirus 30 in complex with its receptors inform a rational prediction for enterovirus receptor usage.
Nat Commun, 11, 2020
7C9U
DownloadVisualize
BU of 7c9u by Molmil
Echovirus 30 E-particle
分子名称: VP0, VP1, VP3
著者Wang, K, Zhu, L, Sun, Y, Li, M, Zhao, X, Cui, L, Zhang, L, Gao, G, Zhai, W, Zhu, F, Rao, Z, Wang, X.
登録日2020-06-07
公開日2020-07-29
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of Echovirus 30 in complex with its receptors inform a rational prediction for enterovirus receptor usage.
Nat Commun, 11, 2020
7C9W
DownloadVisualize
BU of 7c9w by Molmil
E30 F-particle in complex with CD55
分子名称: Complement decay-accelerating factor, MYRISTIC ACID, SPHINGOSINE, ...
著者Wang, K, Zhu, L, Sun, Y, Li, M, Zhao, X, Cui, L, Zhang, L, Gao, G, Zhai, W, Zhu, F, Rao, Z, Wang, X.
登録日2020-06-07
公開日2020-07-29
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structures of Echovirus 30 in complex with its receptors inform a rational prediction for enterovirus receptor usage.
Nat Commun, 11, 2020
7C9T
DownloadVisualize
BU of 7c9t by Molmil
Echovirus 30 A-particle
分子名称: VP1, VP2, VP3
著者Wang, K, Zhu, L, Sun, Y, Li, M, Zhao, X, Cui, L, Zhang, L, Gao, G, Zhai, W, Zhu, F, Rao, Z, Wang, X.
登録日2020-06-07
公開日2020-07-29
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structures of Echovirus 30 in complex with its receptors inform a rational prediction for enterovirus receptor usage.
Nat Commun, 11, 2020
1M2S
DownloadVisualize
BU of 1m2s by Molmil
Solution Structure of A New Potassium Channels Blocker from the Venom of Chinese Scorpion Buthus martensi Karsch
分子名称: Toxin BmTX3
著者Wang, Y, Li, M, Zhang, N, Wu, G, Hu, G, Wu, H.
登録日2002-06-25
公開日2004-04-06
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献The solution structure of BmTx3B, a member of the scorpion toxin subfamily alpha-KTx 16
Proteins, 58, 2005
8HI9
DownloadVisualize
BU of 8hi9 by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with Robinetin
分子名称: 3,7-bis(oxidanyl)-2-[3,4,5-tris(oxidanyl)phenyl]chromen-4-one, 3C-like proteinase nsp5
著者Su, H.X, Xie, H, Li, M.J, Xu, Y.C.
登録日2022-11-19
公開日2023-10-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Discovery of Polyphenolic Natural Products as SARS-CoV-2 M pro Inhibitors for COVID-19.
Pharmaceuticals, 16, 2023
8H3T
DownloadVisualize
BU of 8h3t by Molmil
The crystal structure of AlpH
分子名称: AlpH, GLYCEROL
著者Zhao, Y, Li, M, Jiang, M, Pan, L.F.
登録日2022-10-09
公開日2023-09-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.866 Å)
主引用文献O-methyltransferase-like enzyme catalyzed diazo installation in polyketide biosynthesis.
Nat Commun, 14, 2023

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon