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PDB: 465 results

6DWF
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Crystal structure of complex of BBKI mutant, L55R with Bovine Trypsin
Descriptor: Cationic trypsin, Kunitz-type inihibitor
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2018-06-26
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structures of the complex of a kallikrein inhibitor from Bauhinia bauhinioides with trypsin and modeling of kallikrein complexes.
Acta Crystallogr D Struct Biol, 75, 2019
1MXL
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BU of 1mxl by Molmil
STRUCTURE OF CARDIAC TROPONIN C-TROPONIN I COMPLEX
Descriptor: CALCIUM ION, PROTEIN (TROPONIN C), PROTEIN (TROPONIN I)
Authors:Li, M.X, Spyracopoulos, L, Sykes, B.D.
Deposit date:1999-04-22
Release date:1999-07-06
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Binding of cardiac troponin-I147-163 induces a structural opening in human cardiac troponin-C.
Biochemistry, 38, 1999
8IP4
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Cryo-EM structure of hMRS-highEDTA
Descriptor: CHLORIDE ION, MAGNESIUM ION, Magnesium transporter MRS2 homolog, ...
Authors:Li, M, Li, Y, Yang, X, Shen, Y.Q.
Deposit date:2023-03-14
Release date:2023-06-14
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Molecular basis of Mg 2+ permeation through the human mitochondrial Mrs2 channel.
Nat Commun, 14, 2023
8IP5
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Cryo-EM structure of hMRS2-lowEDTA
Descriptor: CHLORIDE ION, MAGNESIUM ION, Magnesium transporter MRS2 homolog, ...
Authors:Li, M, Li, Y, Yang, X, Shen, Y.Q.
Deposit date:2023-03-14
Release date:2023-06-14
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Molecular basis of Mg 2+ permeation through the human mitochondrial Mrs2 channel.
Nat Commun, 14, 2023
8IP3
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BU of 8ip3 by Molmil
Cryo-EM structure of hMRS2-Mg
Descriptor: CHLORIDE ION, MAGNESIUM ION, Magnesium transporter MRS2 homolog, ...
Authors:Li, M, Li, Y, Yang, X, Shen, Y.Q.
Deposit date:2023-03-14
Release date:2023-06-14
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Molecular basis of Mg 2+ permeation through the human mitochondrial Mrs2 channel.
Nat Commun, 14, 2023
2G31
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BU of 2g31 by Molmil
Human Nogo-A functional domain: nogo60
Descriptor: Reticulon-4
Authors:Li, M.F, Liu, J.X, Song, J.X.
Deposit date:2006-02-17
Release date:2006-08-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Nogo goes in the pure water: solution structure of Nogo-60 and design of the structured and buffer-soluble Nogo-54 for enhancing CNS regeneration
Protein Sci., 15, 2006
6LI3
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BU of 6li3 by Molmil
cryo-EM structure of GPR52-miniGs-NB35
Descriptor: G-protein coupled receptor 52, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Li, M, Wang, N, Xu, F, Wu, J, Lei, M.
Deposit date:2019-12-10
Release date:2020-02-26
Last modified:2020-03-18
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structural basis of ligand recognition and self-activation of orphan GPR52.
Nature, 579, 2020
8IP6
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BU of 8ip6 by Molmil
Cryo-EM structure of hMRS2-rest
Descriptor: CHLORIDE ION, Magnesium transporter MRS2 homolog, mitochondrial
Authors:Li, M, Li, Y, Yang, X, Shen, Y.Q.
Deposit date:2023-03-14
Release date:2023-06-14
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular basis of Mg 2+ permeation through the human mitochondrial Mrs2 channel.
Nat Commun, 14, 2023
6FIV
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BU of 6fiv by Molmil
STRUCTURAL STUDIES OF HIV AND FIV PROTEASES COMPLEXED WITH AN EFFICIENT INHIBITOR OF FIV PR
Descriptor: RETROPEPSIN, SULFATE ION, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
Authors:Li, M, Lee, T, Morris, G, Laco, G, Wong, C, Olson, A, Elder, J, Wlodawer, A, Gustchina, A.
Deposit date:1998-12-02
Release date:1998-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural studies of FIV and HIV-1 proteases complexed with an efficient inhibitor of FIV protease
Proteins, 38, 2000
5TJA
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BU of 5tja by Molmil
I-II linker of TRPML1 channel at pH 6
Descriptor: Mucolipin-1
Authors:Li, M, Zhang, W.K, Benvin, N.M, Zhou, X, Su, D, Li, H, Wang, S, Michailidis, I.E, Tong, L, Li, X, Yang, J.
Deposit date:2016-10-04
Release date:2017-01-25
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of dual Ca(2+)/pH regulation of the endolysosomal TRPML1 channel.
Nat. Struct. Mol. Biol., 24, 2017
1GGP
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BU of 1ggp by Molmil
CRYSTAL STRUCTURE OF TRICHOSANTHES KIRILOWII LECTIN-1 AND ITS RELATION TO THE TYPE 2 RIBOSOME INACTIVATING PROTEINS
Descriptor: PROTEIN (LECTIN 1 A CHAIN), PROTEIN (LECTIN 1 B CHAIN)
Authors:Li, M, Chai, J.J, Wang, Y.P, Wang, K.Y, Bi, R.C.
Deposit date:2000-09-07
Release date:2003-03-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Trichosanthes Kirilowii Lectin-1 and its Relation to the Type 2 Ribosome Inactivating Proteins
PROTEIN PEPT.LETT., 8, 2003
5TJC
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I-II linker of TRPML1 channel at pH 7.5
Descriptor: Mucolipin-1
Authors:Li, M, Zhang, W.K, Benvin, N.M, Zhou, X, Su, D, Li, H, Wang, S, Michailidis, I.E, Tong, L, Li, X, Yang, J.
Deposit date:2016-10-04
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of dual Ca(2+)/pH regulation of the endolysosomal TRPML1 channel.
Nat. Struct. Mol. Biol., 24, 2017
5TJB
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BU of 5tjb by Molmil
I-II linker of TRPML1 channel at pH 4.5
Descriptor: Mucolipin-1
Authors:Li, M, Zhang, W.K, Benvin, N.M, Zhou, X, Su, D, Li, H, Wang, S, Michailidis, I.E, Tong, L, Li, X, Yang, J.
Deposit date:2016-10-04
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of dual Ca(2+)/pH regulation of the endolysosomal TRPML1 channel.
Nat. Struct. Mol. Biol., 24, 2017
7UT3
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BU of 7ut3 by Molmil
Crystal structure of complex of Fab, G10C with GalNAc-pNP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-nitrophenyl 2-acetamido-2-deoxy-alpha-D-galactopyranoside, Fab protein heavy chain, ...
Authors:Li, M, Wlodawer, A.
Deposit date:2022-04-26
Release date:2022-09-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Development of a GalNAc-Tyrosine-Specific Monoclonal Antibody and Detection of Tyrosine O -GalNAcylation in Numerous Human Tissues and Cell Lines.
J.Am.Chem.Soc., 144, 2022
8J0O
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BU of 8j0o by Molmil
cryo-EM structure of human EMC and VDAC
Descriptor: ER membrane protein complex subunit 1, ER membrane protein complex subunit 10, ER membrane protein complex subunit 2, ...
Authors:Li, M, Zhang, C, Wu, J, Lei, M.
Deposit date:2023-04-11
Release date:2024-04-03
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structural insights into human EMC and its interaction with VDAC.
Aging (Albany NY), 16, 2024
1ZVK
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BU of 1zvk by Molmil
Structure of Double mutant, D164N, E78H of Kumamolisin-As
Descriptor: CALCIUM ION, kumamolisin-As
Authors:Li, M, Wlodawer, A, Gustchina, A, Nakayama, T.
Deposit date:2005-06-02
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Processing, catalytic activity and crystal structures of kumamolisin-As with an engineered active site.
Febs J., 273, 2006
1ZVJ
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Structure of Kumamolisin-AS mutant, D164N
Descriptor: CALCIUM ION, SULFATE ION, kumamolisin-As
Authors:Li, M, Wlodawer, A, Gustchina, A, Nakayama, T.
Deposit date:2005-06-02
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Processing, catalytic activity and crystal structures of kumamolisin-As with an engineered active site.
Febs J., 273, 2006
8J0N
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BU of 8j0n by Molmil
cryo-EM structure of human EMC
Descriptor: ER membrane protein complex subunit 1, ER membrane protein complex subunit 10, ER membrane protein complex subunit 2, ...
Authors:Li, M, Zhang, C, Wu, J, Lei, M.
Deposit date:2023-04-11
Release date:2024-04-03
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Structural insights into human EMC and its interaction with VDAC.
Aging (Albany NY), 16, 2024
6U8Q
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BU of 6u8q by Molmil
CryoEM structure of HIV-1 cleaved synaptic complex (CSC) intasome
Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ...
Authors:Li, M, Chen, X, Craigie, R.
Deposit date:2019-09-05
Release date:2020-02-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.67 Å)
Cite:A Peptide Derived from Lens Epithelium-Derived Growth Factor Stimulates HIV-1 DNA Integration and Facilitates Intasome Structural Studies.
J.Mol.Biol., 432, 2020
1AER
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BU of 1aer by Molmil
DOMAIN III OF PSEUDOMONAS AERUGINOSA EXOTOXIN COMPLEXED WITH BETA-TAD
Descriptor: 2-(1,5-DIDEOXYRIBOSE)-4-AMIDO-THIAZOLE, ADENOSINE MONOPHOSPHATE, BETA-METHYLENE-THIAZOLE-4-CARBOXYAMIDE-ADENINE DINUCLEOTIDE, ...
Authors:Li, M, Dyda, F, Benhar, I, Pastan, I, Davies, D.R.
Deposit date:1995-12-11
Release date:1996-06-10
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the catalytic domain of Pseudomonas exotoxin A complexed with a nicotinamide adenine dinucleotide analog: implications for the activation process and for ADP ribosylation
Proc.Natl.Acad.Sci.USA, 93, 1996
5H3O
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BU of 5h3o by Molmil
Structure of a eukaryotic cyclic nucleotide-gated channel
Descriptor: CYCLIC GUANOSINE MONOPHOSPHATE, Cyclic nucleotide-gated cation channel, SODIUM ION
Authors:Li, M, Zhou, X, Wang, S, Michailidis, I, Gong, Y, Su, D, Li, H, Li, X, Yang, J.
Deposit date:2016-10-26
Release date:2017-01-25
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of a eukaryotic cyclic-nucleotide-gated channel.
Nature, 542, 2017
5E0S
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BU of 5e0s by Molmil
crystal structure of the active form of the proteolytic complex clpP1 and clpP2
Descriptor: ATP-dependent Clp protease proteolytic subunit 1, ATP-dependent Clp protease proteolytic subunit 2
Authors:LI, M, Wlodawer, A, Maurizi, M.
Deposit date:2015-09-29
Release date:2016-02-17
Last modified:2016-04-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and Functional Properties of the Active Form of the Proteolytic Complex, ClpP1P2, from Mycobacterium tuberculosis.
J.Biol.Chem., 291, 2016
1SIO
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BU of 1sio by Molmil
Structure of Kumamolisin-As complexed with a covalently-bound inhibitor, AcIPF
Descriptor: Ace-ILE-PRO-PHL peptide inhibitor, CALCIUM ION, SULFATE ION, ...
Authors:Li, M, Wlodawer, A, Gustchina, A, Tsuruoka, N, Ashida, M, Minakata, H, Oyama, H, Oda, K, Nishino, T, Nakayama, T.
Deposit date:2004-03-01
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic and biochemical investigations of kumamolisin-As, a serine-carboxyl peptidase with collagenase activity
J.Biol.Chem., 279, 2004
6VDK
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BU of 6vdk by Molmil
CryoEM structure of HIV-1 conserved Intasome Core
Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ...
Authors:Li, M, Chen, X, Craigie, R.
Deposit date:2019-12-27
Release date:2020-02-05
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:A Peptide Derived from Lens Epithelium-Derived Growth Factor Stimulates HIV-1 DNA Integration and Facilitates Intasome Structural Studies.
J.Mol.Biol., 432, 2020
5C9F
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BU of 5c9f by Molmil
Crystal structure of a retropepsin-like aspartic protease from Rickettsia conorii
Descriptor: ApRick protease, CHLORIDE ION, SODIUM ION
Authors:Li, M, Gustchina, A, Cruz, R, Simoes, M, Curto, P, Martinez, J, Faro, C, Simoes, I, Wlodawer, A.
Deposit date:2015-06-26
Release date:2015-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of RC1339/APRc from Rickettsia conorii, a retropepsin-like aspartic protease.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015

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