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PDB: 833 件

8JQB
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Structure of Gabija GajA-GajB 4:4 Complex
分子名称: Endonuclease GajA, Gabija protein GajB
著者Li, J, Wang, Z, Wang, L.
登録日2023-06-13
公開日2024-02-28
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
4Y5W
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Transcription factor-DNA complex
分子名称: DNA (5'-D(P*AP*TP*GP*GP*AP*TP*TP*TP*CP*CP*TP*AP*GP*GP*AP*AP*GP*AP*CP*AP*A)-3'), DNA (5'-D(P*TP*TP*GP*TP*CP*TP*TP*CP*CP*TP*AP*GP*GP*AP*AP*AP*TP*CP*CP*AP*T)-3'), Signal transducer and activator of transcription 6
著者Li, J, Niu, F, Ouyang, S, Liu, Z.
登録日2015-02-12
公開日2016-02-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.104 Å)
主引用文献Structural basis for DNA recognition by STAT6
Proc.Natl.Acad.Sci.USA, 113, 2016
5HQC
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A Glycoside Hydrolase Family 97 enzyme R171K variant from Pseudoalteromonas sp. strain K8
分子名称: CALCIUM ION, CHLORIDE ION, FORMIC ACID, ...
著者Li, J, He, C, Xiao, Y.
登録日2016-01-21
公開日2017-01-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structures of PspAG97A alpha-glucoside hydrolase reveal a novel mechanism for chloride induced activation.
J. Struct. Biol., 196, 2016
5HQB
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A Glycoside Hydrolase Family 97 enzyme (E480Q) in complex with Panose from Pseudoalteromonas sp. strain K8
分子名称: Alpha-glucosidase, CALCIUM ION, CHLORIDE ION, ...
著者Li, J, He, C, Xiao, Y.
登録日2016-01-21
公開日2017-01-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of PspAG97A alpha-glucoside hydrolase reveal a novel mechanism for chloride induced activation.
J. Struct. Biol., 196, 2016
4Y5U
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Transcription factor
分子名称: NICKEL (II) ION, Signal transducer and activator of transcription 6
著者Li, J, Niu, F, Ouyang, S, Liu, Z.
登録日2015-02-12
公開日2016-02-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.708 Å)
主引用文献Structural basis for DNA recognition by STAT6
Proc.Natl.Acad.Sci.USA, 113, 2016
8CTI
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Cryo-EM structure of human METTL1-WDR4-tRNA(Val) complex
分子名称: tRNA (guanine-N(7)-)-methyltransferase, tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4, tRNA-Val-TAC-2-1
著者Li, J, Wang, L, Fontana, P, Hunkeler, M, Roy-Burman, S.S, Wu, H, Fischer, E.S, Gregory, R.I.
登録日2022-05-14
公開日2022-12-07
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis of regulated m 7 G tRNA modification by METTL1-WDR4.
Nature, 613, 2023
8CTH
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Cryo-EM structure of human METTL1-WDR4-tRNA(Phe) complex
分子名称: Phe-tRNA, S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine-N(7)-)-methyltransferase, ...
著者Li, J, Wang, L, Fontana, P, Hunkeler, M, Roy-Burman, S.S, Wu, H, Fishcer, E.S, Gregory, R.I.
登録日2022-05-14
公開日2022-12-07
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of regulated m 7 G tRNA modification by METTL1-WDR4.
Nature, 613, 2023
4L8Z
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Crystal structure of Human Hsp90 with RL1
分子名称: Heat shock protein HSP 90-alpha, [5-(6-bromo[1,2,4]triazolo[4,3-a]pyridin-3-yl)-2,4-dihydroxyphenyl](3,4-dihydroisoquinolin-2(1H)-yl)methanone
著者Li, J, Ren, J, Yang, M, Xiong, B, He, J.
登録日2013-06-18
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.703 Å)
主引用文献Identification of a new series of potent diphenol HSP90 inhibitors by fragment merging and structure-based optimization
Bioorg.Med.Chem.Lett., 24, 2014
8EW5
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The structure of flightin within myosin thick filaments from Bombus ignitus flight muscle
分子名称: Flightin
著者Li, J, Rahmani, H, Abbasi Yeganeh, F, Rastegarpouyani, H, Taylor, D.W, Wood, N.B, Previs, M.J, Iwamoto, H, Taylor, K.A.
登録日2022-10-21
公開日2023-01-04
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Structure of the Flight Muscle Thick Filament from the Bumble Bee, Bombus ignitus , at 6 angstrom Resolution.
Int J Mol Sci, 24, 2022
4L91
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Crystal structure of Human Hsp90 with X29
分子名称: 4-(6-bromo[1,2,4]triazolo[4,3-a]pyridin-3-yl)-6-chlorobenzene-1,3-diol, Heat shock protein HSP 90-alpha
著者Li, J, Ren, J, Yang, M, Xiong, B, He, J.
登録日2013-06-18
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Identification of a new series of potent diphenol HSP90 inhibitors by fragment merging and structure-based optimization
Bioorg.Med.Chem.Lett., 24, 2014
4L94
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Crystal structure of Human Hsp90 with S46
分子名称: (4-hydroxyphenyl)(4-methylpiperazin-1-yl)methanone, Heat shock protein HSP 90-alpha
著者Li, J, Ren, J, Yang, M, Xiong, B, He, J.
登録日2013-06-18
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.649 Å)
主引用文献Identification of a new series of potent diphenol HSP90 inhibitors by fragment merging and structure-based optimization
Bioorg.Med.Chem.Lett., 24, 2014
1YZX
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Crystal structure of human kappa class glutathione transferase
分子名称: Glutathione S-transferase kappa 1, L-GAMMA-GLUTAMYL-3-SULFINO-L-ALANYLGLYCINE
著者Li, J, Xia, Z, Ding, J.
登録日2005-02-28
公開日2005-11-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Thioredoxin-like domain of human kappa class glutathione transferase reveals sequence homology and structure similarity to the theta class enzyme
PROTEIN SCI., 14, 2005
4O7P
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Crystal structure of Mycobacterium tuberculosis maltose kinase MaK complexed with maltose
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Maltokinase, SULFATE ION, ...
著者Li, J, Guan, X.T, Rao, Z.H.
登録日2013-12-26
公開日2014-10-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Homotypic dimerization of a maltose kinase for molecular scaffolding.
Sci Rep, 4, 2014
4O7O
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Crystal structure of Mycobacterium tuberculosis maltose kinase MaK
分子名称: Maltokinase, SULFATE ION
著者Li, J, Guan, X.T, Rao, Z.H.
登録日2013-12-26
公開日2014-10-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4006 Å)
主引用文献Homotypic dimerization of a maltose kinase for molecular scaffolding.
Sci Rep, 4, 2014
6WLG
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BU of 6wlg by Molmil
Ints3 C-terminal Domain
分子名称: Integrator complex subunit 3
著者Li, J, Ma, X.L, Banerjee, S, Dong, Z.G.
登録日2020-04-20
公開日2020-12-02
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.111 Å)
主引用文献Structural basis for multifunctional roles of human Ints3 C-terminal domain.
J.Biol.Chem., 296, 2020
6WQX
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Human PRPK-TPRKB complex
分子名称: EKC/KEOPS complex subunit TP53RK, EKC/KEOPS complex subunit TPRKB, MAGNESIUM ION, ...
著者Li, J, Ma, X.L, Banerjee, S, Dong, Z.G.
登録日2020-04-29
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Crystal structure of the human PRPK-TPRKB complex.
Commun Biol, 4, 2021
5D39
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BU of 5d39 by Molmil
Transcription factor-DNA complex
分子名称: DNA (5'-D(P*AP*TP*GP*GP*AP*TP*TP*TP*CP*CP*TP*GP*GP*AP*AP*GP*AP*CP*AP*GP*A)-3'), DNA (5'-D(P*TP*CP*TP*GP*TP*CP*TP*TP*CP*CP*AP*GP*GP*AP*AP*AP*TP*CP*CP*AP*T)-3'), Signal transducer and activator of transcription 6
著者Li, J, Niu, F, Ouyang, S, Liu, Z.
登録日2015-08-06
公開日2016-08-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for DNA recognition by STAT6
Proc.Natl.Acad.Sci.USA, 113, 2016
6XMV
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BU of 6xmv by Molmil
The crystal structure of Neisseria gonorrhoeae DolP (NGO1985)
分子名称: CHLORIDE ION, Hemolysin,Endolysin
著者Li, J, Peterson Brown, L.E, Reed, R.W, Wierzbicki, I.H, Sikora, A.E, Korotkov, K.V.
登録日2020-06-30
公開日2021-11-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The structure and function of a new component of Bam complex in Neisseria
To Be Published
7VFP
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BU of 7vfp by Molmil
Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with heme and single ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cytochrome c biogenesis ATP-binding export protein CcmA, Heme exporter protein B, ...
著者Li, J, Zheng, W, Gu, M, Zhang, K, Zhu, J.P.
登録日2021-09-13
公開日2022-11-09
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4.03 Å)
主引用文献Structures of the CcmABCD heme release complex at multiple states.
Nat Commun, 13, 2022
2O9Q
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The crystal structure of Bovine Trypsin complexed with a small inhibition peptide ORB2K
分子名称: CALCIUM ION, Cationic trypsin, ORB2K, ...
著者Li, J, Zhang, C, Xu, X, Wang, J, Gong, W, Lai, R.
登録日2006-12-14
公開日2007-12-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献From protease inhibitor to antibiotics: single point mutation makes tremendous functional shift
To be Published
1SEK
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BU of 1sek by Molmil
THE STRUCTURE OF ACTIVE SERPIN K FROM MANDUCA SEXTA AND A MODEL FOR SERPIN-PROTEASE COMPLEX FORMATION
分子名称: SERPIN K
著者Li, J, Wang, Z, Canagarajah, B, Jiang, H, Kanost, M, Goldsmith, E.J.
登録日1998-03-06
公開日1999-03-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of active serpin 1K from Manduca sexta.
Structure Fold.Des., 7, 1999
8IC1
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endo-alpha-D-arabinanase EndoMA1 D51N mutant from Microbacterium arabinogalactanolyticum in complex with arabinooligosaccharides
分子名称: (3~{a}~{S},5~{R},6~{R},6~{a}~{S})-5-(hydroxymethyl)-2,2-dimethyl-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3]dioxol-6-ol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Li, J, Nakashima, C, Ishiwata, A, Fujita, K, Fushinobu, S.
登録日2023-02-10
公開日2023-08-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Identification and characterization of endo-alpha-, exo-alpha-, and exo-beta-D-arabinofuranosidases degrading lipoarabinomannan and arabinogalactan of mycobacteria.
Nat Commun, 14, 2023
5DWD
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BU of 5dwd by Molmil
Crystal structure of esterase PE8
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Esterase, GLYCEROL
著者Li, J, Huang, J.
登録日2015-09-22
公開日2016-10-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structure of esterase PE8
To Be Published
2B26
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The crystal structure of the protein complex of yeast Hsp40 Sis1 and Hsp70 Ssa1
分子名称: Heat shock 70 kDa protein cognate 2, SIS1 protein
著者Li, J, Wu, Y, Qian, X, Sha, B.
登録日2005-09-16
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of yeast Sis1 peptide-binding fragment and Hsp70 Ssa1 C-terminal complex.
Biochem.J., 398, 2006
2AD6
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BU of 2ad6 by Molmil
crystal structure of methanol dehydrogenase from M. W3A1 (form C)
分子名称: CALCIUM ION, Methanol dehydrogenase subunit 1, Methanol dehydrogenase subunit 2, ...
著者Li, J, Gan, J.-H, Xia, Z.-X, Mathews, F.S.
登録日2005-07-20
公開日2006-07-25
最終更新日2013-09-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The enzymatic reaction-induced configuration change of the prosthetic group PQQ of methanol dehydrogenase
Biochem.Biophys.Res.Commun., 406, 2011

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件を2024-08-07に公開中

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