Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1804 results

8FOD
DownloadVisualize
BU of 8fod by Molmil
Cryo-EM structure of S. cerevisiae DNA polymerase alpha-primase complex in Apo state conformation II
Descriptor: DNA polymerase, DNA polymerase alpha subunit B, DNA primase, ...
Authors:Yuan, Z, Georgescu, R, Li, H, O'Donnell, M.
Deposit date:2022-12-30
Release date:2023-05-31
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Molecular choreography of primer synthesis by the eukaryotic Pol alpha-primase.
Nat Commun, 14, 2023
6BS8
DownloadVisualize
BU of 6bs8 by Molmil
The class 3 DnaB intein from Mycobacterium smegmatis
Descriptor: Replicative DNA helicase
Authors:Li, Z, Kelley, D.S, Banavali, N, Belfort, M, Li, H.
Deposit date:2017-12-01
Release date:2018-11-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mycobacterial DnaB helicase intein as oxidative stress sensor.
Nat Commun, 9, 2018
5VVX
DownloadVisualize
BU of 5vvx by Molmil
Structural Investigations of the Substrate Specificity of Human O-GlcNAcase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lamin B1, Protein O-GlcNAcase
Authors:Li, B, Jiang, J, Li, H, Hu, C.-W.
Deposit date:2017-05-21
Release date:2017-09-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insights into the substrate binding adaptability and specificity of human O-GlcNAcase.
Nat Commun, 8, 2017
4MXM
DownloadVisualize
BU of 4mxm by Molmil
Crystal structure of superantigen pfit
Descriptor: Transcriptional regulator I2
Authors:Liu, L.H, Chen, H, Li, H.M.
Deposit date:2013-09-26
Release date:2014-09-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Pfit is a structurally novel Crohn's disease-associated superantigen.
Plos Pathog., 9, 2013
2NNW
DownloadVisualize
BU of 2nnw by Molmil
Alternative conformations of Nop56/58-fibrillarin complex and implication for induced-fit assenly of box C/D RNPs
Descriptor: Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase, NOP5/NOP56 related protein
Authors:Oruganti, S, Zhang, Y, Terns, R, Terns, M.P, Li, H.
Deposit date:2006-10-24
Release date:2007-08-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Alternative Conformations of the Archaeal Nop56/58-Fibrillarin Complex Imply Flexibility in Box C/D RNPs.
J.Mol.Biol., 371, 2007
1YW5
DownloadVisualize
BU of 1yw5 by Molmil
Peptidyl-prolyl isomerase ESS1 from Candida albicans
Descriptor: peptidyl prolyl cis/trans isomerase
Authors:Li, Z, Li, H, Devasahayam, G, Gemmill, T, Chaturvedi, V, Hanes, S.D, Van Roey, P.
Deposit date:2005-02-17
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structure of the Candida albicans Ess1 Prolyl Isomerase Reveals a Well-Ordered Linker that Restricts Domain Mobility
Biochemistry, 44, 2005
5VVV
DownloadVisualize
BU of 5vvv by Molmil
Structural Investigations of the Substrate Specificity of Human O-GlcNAcase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Protein O-GlcNAcase, a-crystallin B
Authors:Li, B, Jiang, J, Li, H, Hu, C.-W.
Deposit date:2017-05-20
Release date:2017-09-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the substrate binding adaptability and specificity of human O-GlcNAcase.
Nat Commun, 8, 2017
1Z28
DownloadVisualize
BU of 1z28 by Molmil
Crystal Structures of SULT1A2 and SULT1A1*3: Implications in the bioactivation of N-hydroxy-2-acetylamino fluorine (OH-AAF)
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Phenol-sulfating phenol sulfotransferase 1
Authors:Lu, J, Li, H, Liu, M.C, Zhang, J, Li, M, An, X, Chang, W.
Deposit date:2005-03-07
Release date:2006-05-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of SULT1A2 and SULT1A1 *3: insights into the substrate inhibition and the role of Tyr149 in SULT1A2.
Biochem.Biophys.Res.Commun., 396, 2010
5VVU
DownloadVisualize
BU of 5vvu by Molmil
Structural Investigations of the Substrate Specificity of Human O-GlcNAcase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Protein O-GlcNAcase, TAB1 peptide
Authors:Li, B, Jiang, J, Li, H, Hu, C.-W.
Deposit date:2017-05-20
Release date:2017-09-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into the substrate binding adaptability and specificity of human O-GlcNAcase.
Nat Commun, 8, 2017
5VVT
DownloadVisualize
BU of 5vvt by Molmil
Structural Investigations of the Substrate Specificity of Human O-GlcNAcase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ELK1 peptide, Protein O-GlcNAcase
Authors:Li, B, Jiang, J, Li, H, Hu, C.-W.
Deposit date:2017-05-20
Release date:2017-09-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the substrate binding adaptability and specificity of human O-GlcNAcase.
Nat Commun, 8, 2017
1Z29
DownloadVisualize
BU of 1z29 by Molmil
Crystal Structures of SULT1A2 and SULT1A1*3: Implications in the bioactivation of N-hydroxy-2-acetylamino fluorine (OH-AAF)
Descriptor: ACETIC ACID, ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Lu, J, Li, H, Liu, M.C, Zhang, J, Li, M, An, X, Chang, W.
Deposit date:2005-03-07
Release date:2006-05-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of SULT1A2 and SULT1A1 *3: insights into the substrate inhibition and the role of Tyr149 in SULT1A2.
Biochem.Biophys.Res.Commun., 396, 2010
2VQI
DownloadVisualize
BU of 2vqi by Molmil
Structure of the P pilus usher (PapC) translocation pore
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LAURYL DIMETHYLAMINE-N-OXIDE, OUTER MEMBRANE USHER PROTEIN PAPC
Authors:Remaut, H, Tang, C, Henderson, N.S, Pinkner, J.S, Wang, T, Hultgren, S.J, Thanassi, D.G, Li, H, Waksman, G.
Deposit date:2008-03-16
Release date:2008-05-27
Last modified:2019-01-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Fiber formation across the bacterial outer membrane by the chaperone/usher pathway.
Cell, 133, 2008
5BKH
DownloadVisualize
BU of 5bkh by Molmil
The splicing activity and an alternative domain-swapped structure of the Pyrococcus horikoshii PolII mini-intein
Descriptor: DNA polymerase II large subunit
Authors:Li, Z, Li, H.
Deposit date:2021-03-19
Release date:2021-08-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:An alternative domain-swapped structure of the Pyrococcus horikoshii PolII mini-intein.
Sci Rep, 11, 2021
3DL4
DownloadVisualize
BU of 3dl4 by Molmil
Non-Aged Form of Mouse Acetylcholinesterase Inhibited by Tabun- Update
Descriptor: Acetylcholinesterase, HEXAETHYLENE GLYCOL
Authors:Carletti, E, Li, H, Li, B, Ekstrom, F, Nicolet, Y, Loiodice, M, Gillon, E, Froment, M.T, Lockridge, O, Schopfer, L.M, Masson, P, Nachon, F.
Deposit date:2008-06-26
Release date:2008-12-02
Last modified:2021-03-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Aging of Cholinesterases Phosphylated by Tabun Proceeds through O-Dealkylation.
J.Am.Chem.Soc., 130, 2008
1NDG
DownloadVisualize
BU of 1ndg by Molmil
Crystal structure of Fab fragment of antibody HyHEL-8 complexed with its antigen lysozyme
Descriptor: ACETIC ACID, Lysozyme C, antibody kappa light chain, ...
Authors:Mariuzza, R.A, Li, Y, Li, H, Yang, F, Smith-Gill, S.J.
Deposit date:2002-12-09
Release date:2003-06-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray snapshots of the maturation of an antibody response to a protein antigen
Nat.Struct.Biol., 10, 2003
4R05
DownloadVisualize
BU of 4r05 by Molmil
Crystal structure of the refolded DENV3 methyltransferase
Descriptor: Nonstructural protein NS5
Authors:Brecher, M.B, Li, Z, Zhang, J, Chen, H, Lin, Q, Liu, B, Li, H.M.
Deposit date:2014-07-29
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Refolding of a fully functional flavivirus methyltransferase revealed that S-adenosyl methionine but not S-adenosyl homocysteine is copurified with flavivirus methyltransferase.
Protein Sci., 24, 2015
3B3N
DownloadVisualize
BU of 3b3n by Molmil
Structure of neuronal NOS heme domain in complex with a inhibitor (+-)-N1-{cis-4'-[(6"-aminopyridin-2"-yl)methyl]pyrrolidin-3'-yl}ethane-1,2-diamine
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, N-{(3S,4S)-4-[(6-aminopyridin-2-yl)methyl]pyrrolidin-3-yl}ethane-1,2-diamine, ...
Authors:Igarashi, J, Li, H, Poulos, T.L.
Deposit date:2007-10-22
Release date:2008-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Minimal pharmacophoric elements and fragment hopping, an approach directed at molecular diversity and isozyme selectivity. Design of selective neuronal nitric oxide synthase inhibitors.
J.Am.Chem.Soc., 130, 2008
3B3M
DownloadVisualize
BU of 3b3m by Molmil
Structure of neuronal NOS heme domain in complex with a inhibitor (+-)-3-{cis-4'-[(6"-aminopyridin-2"-yl)methyl]pyrrolidin-3'-ylamino}propan-1-ol
Descriptor: 3-({(3S,4S)-4-[(6-aminopyridin-2-yl)methyl]pyrrolidin-3-yl}amino)propan-1-ol, 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, ...
Authors:Igarashi, J, Li, H, Poulos, T.L.
Deposit date:2007-10-22
Release date:2008-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Minimal pharmacophoric elements and fragment hopping, an approach directed at molecular diversity and isozyme selectivity. Design of selective neuronal nitric oxide synthase inhibitors.
J.Am.Chem.Soc., 130, 2008
8E0Q
DownloadVisualize
BU of 8e0q by Molmil
Structure of the human UBR5 HECT-type E3 ubiquitin ligase in a C2 symmetric dimeric form
Descriptor: E3 ubiquitin-protein ligase UBR5, ZINC ION
Authors:Wang, F, He, Q, Lin, G, Li, H.
Deposit date:2022-08-09
Release date:2023-04-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Structure of the human UBR5 E3 ubiquitin ligase.
Structure, 31, 2023
8UD9
DownloadVisualize
BU of 8ud9 by Molmil
Structure of human constitutive 20S proteasome complexed with the inhibitor TDI-8304
Descriptor: (7S,10S,13S)-N-cyclopentyl-10-[2-(morpholin-4-yl)ethyl]-9,12-dioxo-13-(2-oxopyrrolidin-1-yl)-2-oxa-8,11-diazabicyclo[13.3.1]nonadeca-1(19),15,17-triene-7-carboxamide, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ...
Authors:Hsu, H.-C, Li, H.
Deposit date:2023-09-28
Release date:2023-12-20
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (2.04 Å)
Cite:Structures revealing mechanisms of resistance and collateral sensitivity of Plasmodium falciparum to proteasome inhibitors.
Nat Commun, 14, 2023
2RG7
DownloadVisualize
BU of 2rg7 by Molmil
Apo- Crystal Structure of a Periplasmic Heme Binding Protein from Shigella dysenteriae
Descriptor: Periplasmic HEME binding protein
Authors:Ho, W.W, Li, H.
Deposit date:2007-10-02
Release date:2007-10-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Holo- and apo-bound structures of bacterial periplasmic heme-binding proteins.
J.Biol.Chem., 282, 2007
8EWI
DownloadVisualize
BU of 8ewi by Molmil
Structure of the human UBR5 HECT-type E3 ubiquitin ligase in a tetrameric form
Descriptor: E3 ubiquitin-protein ligase UBR5, ZINC ION
Authors:Wang, F, He, Q, Lin, G, Li, H.
Deposit date:2022-10-23
Release date:2023-04-19
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of the human UBR5 E3 ubiquitin ligase.
Structure, 31, 2023
1JFF
DownloadVisualize
BU of 1jff by Molmil
Refined structure of alpha-beta tubulin from zinc-induced sheets stabilized with taxol
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lowe, J, Li, H, Downing, K.H, Nogales, E.
Deposit date:2001-06-20
Release date:2001-09-19
Last modified:2023-08-16
Method:ELECTRON CRYSTALLOGRAPHY (3.5 Å)
Cite:Refined structure of alpha beta-tubulin at 3.5 A resolution.
J.Mol.Biol., 313, 2001
7N15
DownloadVisualize
BU of 7n15 by Molmil
Structure of TAX-4_R421W w/cGMP open state
Descriptor: 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CYCLIC GUANOSINE MONOPHOSPHATE, ...
Authors:Zheng, X, Li, H, Hu, Z, Su, D, Yang, J.
Deposit date:2021-05-27
Release date:2022-03-16
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural and functional characterization of an achromatopsia-associated mutation in a phototransduction channel.
Commun Biol, 5, 2022
7N16
DownloadVisualize
BU of 7n16 by Molmil
Structure of TAX-4_R421W apo closed state
Descriptor: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Cyclic nucleotide-gated cation channel, SODIUM ION
Authors:Zheng, X, Li, H, Hu, Z, Su, D, Yang, J.
Deposit date:2021-05-27
Release date:2022-03-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural and functional characterization of an achromatopsia-associated mutation in a phototransduction channel.
Commun Biol, 5, 2022

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon