7CN7
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7CN6
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6HHK
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5IV5
| Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex | Descriptor: | Baseplate hub protein gp27, Baseplate tail-tube protein gp48, Baseplate tail-tube protein gp54, ... | Authors: | Taylor, N.M.I, Guerrero-Ferreira, R.C, Goldie, K.N, Stahlberg, H, Leiman, P.G. | Deposit date: | 2016-03-19 | Release date: | 2016-05-18 | Last modified: | 2018-02-07 | Method: | ELECTRON MICROSCOPY (4.11 Å) | Cite: | Structure of the T4 baseplate and its function in triggering sheath contraction. Nature, 533, 2016
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5IV7
| Cryo-electron microscopy structure of the star-shaped, hubless post-attachment T4 baseplate | Descriptor: | Baseplate wedge protein gp10, Baseplate wedge protein gp11, Baseplate wedge protein gp25, ... | Authors: | Taylor, N.M.I, Guerrero-Ferreira, R.C, Goldie, K.N, Stahlberg, H, Leiman, P.G. | Deposit date: | 2016-03-19 | Release date: | 2016-05-18 | Last modified: | 2018-02-07 | Method: | ELECTRON MICROSCOPY (6.77 Å) | Cite: | Structure of the T4 baseplate and its function in triggering sheath contraction. Nature, 533, 2016
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6HX0
| Cell wall binding domain of endolysin from Listeria phage A500. | Descriptor: | L-alanyl-D-glutamate peptidase | Authors: | Dunne, M, Taylor, N.M.I, Shen, Y, Loessner, M.J, Leiman, P.G. | Deposit date: | 2018-10-15 | Release date: | 2019-10-30 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (1.59 Å) | Cite: | Structural basis for recognition of bacterial cell wall teichoic acid by pseudo-symmetric SH3b-like repeats of a viral peptidoglycan hydrolase Chem Sci, 2020
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3J9Q
| Atomic structures of a bactericidal contractile nanotube in its pre- and post-contraction states | Descriptor: | sheath, tube | Authors: | Ge, P, Scholl, D, Leiman, P.G, Yu, X, Miller, J.F, Zhou, Z.H. | Deposit date: | 2015-02-17 | Release date: | 2015-04-01 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states. Nat.Struct.Mol.Biol., 22, 2015
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1YUE
| Bacteriophage T4 capsid vertex protein gp24 | Descriptor: | Head vertex protein Gp24 | Authors: | Fokine, A, Leiman, P.G, Shneider, M.M, Ahvazi, B, Boeshans, K.M, Steven, A.C, Black, L.W, Mesyanzhinov, V.V, Rossmann, M.G. | Deposit date: | 2005-02-14 | Release date: | 2005-04-26 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry. Proc.Natl.Acad.Sci.Usa, 102, 2005
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3J9R
| Atomic structures of a bactericidal contractile nanotube in its pre- and post-contraction states | Descriptor: | sheath | Authors: | Ge, P, Scholl, D, Leiman, P.G, Yu, X, Miller, J.F, Zhou, Z.H. | Deposit date: | 2015-02-17 | Release date: | 2015-04-01 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.9 Å) | Cite: | Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states. Nat.Struct.Mol.Biol., 22, 2015
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5W5E
| Re-refinement of the pyocin tube structure | Descriptor: | FIIR2 protein | Authors: | Wang, F, Zheng, W, Taylor, N.M, Guerrero-Ferreira, R.C, Leiman, P.G, Egelman, E.H. | Deposit date: | 2017-06-15 | Release date: | 2017-08-16 | Last modified: | 2024-03-13 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Refined Cryo-EM Structure of the T4 Tail Tube: Exploring the Lowest Dose Limit. Structure, 25, 2017
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1FOQ
| PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | Descriptor: | BACTERIOPHAGE PHI29 PROHEAD RNA | Authors: | Simpson, A.A, Tao, Y, Leiman, P.G, Badasso, M.O, He, Y, Jardine, P.J, Olson, N.H, Morais, M.C, Grimes, S, Anderson, D.L, Baker, T.S, Rossmann, M.G. | Deposit date: | 2000-08-28 | Release date: | 2000-12-22 | Last modified: | 2024-02-07 | Method: | ELECTRON MICROSCOPY (20 Å) | Cite: | Structure of the bacteriophage phi29 DNA packaging motor. Nature, 408, 2000
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6RJU
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1IJG
| Structure of the Bacteriophage phi29 Head-Tail Connector Protein | Descriptor: | UPPER COLLAR PROTEIN | Authors: | Simpson, A.A, Leiman, P.G, Tao, Y, He, Y, Badasso, M, Jardine, P.J, Anderson, D.L, Rossmann, M.G. | Deposit date: | 2001-04-26 | Release date: | 2001-05-09 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structure determination of the head-tail connector of bacteriophage phi29. Acta Crystallogr.,Sect.D, 57, 2001
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1K28
| The Structure of the Bacteriophage T4 Cell-Puncturing Device | Descriptor: | BASEPLATE STRUCTURAL PROTEIN GP27, PHOSPHATE ION, POTASSIUM ION, ... | Authors: | Kanamaru, S, Leiman, P.G, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Arisaka, F, Rossmann, M.G. | Deposit date: | 2001-09-26 | Release date: | 2002-02-06 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structure of the cell-puncturing device of bacteriophage T4. Nature, 415, 2002
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6PYT
| CryoEM Structure of Pyocin R2 - precontracted - trunk | Descriptor: | Pyocin sheath PA0622, Pyocin tube PA0623 | Authors: | Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H. | Deposit date: | 2019-07-30 | Release date: | 2020-04-15 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (2.9 Å) | Cite: | Action of a minimal contractile bactericidal nanomachine. Nature, 580, 2020
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6F45
| Crystal structure of the gp37-gp38 adhesin tip complex of the bacteriophage S16 long tail fiber | Descriptor: | (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, IMIDAZOLE, ... | Authors: | Dunne, M, Leiman, P, Klumpp, J, Loessner, M.J. | Deposit date: | 2017-11-29 | Release date: | 2018-08-01 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (1.70355821 Å) | Cite: | Salmonella Phage S16 Tail Fiber Adhesin Features a Rare Polyglycine Rich Domain for Host Recognition. Structure, 26, 2018
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1FOU
| CONNECTOR PROTEIN FROM BACTERIOPHAGE PHI29 | Descriptor: | UPPER COLLAR PROTEIN | Authors: | Simpson, A.A, Tao, Y, Leiman, P.G, Badasso, M.O, He, Y, Jardine, P.J, Olson, N.H, Morais, M.C, Grimes, S.N, Anderson, D.L, Baker, T.S, Rossmann, M.G. | Deposit date: | 2000-08-28 | Release date: | 2000-12-22 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | Structure of the bacteriophage phi29 DNA packaging motor. Nature, 408, 2000
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4JJ2
| High resolution structure of a C-terminal fragment of the T4 phage gp5 beta-helix | Descriptor: | 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ... | Authors: | Buth, S.A, Leiman, P.G, Boudko, S.P. | Deposit date: | 2013-03-07 | Release date: | 2014-03-12 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.28 Å) | Cite: | Structure and Biophysical Properties of a Triple-Stranded Beta-Helix Comprising the Central Spike of Bacteriophage T4. Viruses, 7, 2015
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6U5B
| CryoEM Structure of Pyocin R2 - precontracted - baseplate | Descriptor: | Glue PA0627, Ripcord PA0626, Sheath Initiator PA0617, ... | Authors: | Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H. | Deposit date: | 2019-08-27 | Release date: | 2020-04-15 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Action of a minimal contractile bactericidal nanomachine. Nature, 580, 2020
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6U5K
| CryoEM Structure of Pyocin R2 - postcontracted - baseplate | Descriptor: | Glue PA0627, Sheath Initiator PA0617, Sheath PA0622, ... | Authors: | Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H. | Deposit date: | 2019-08-27 | Release date: | 2020-04-15 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Action of a minimal contractile bactericidal nanomachine. Nature, 580, 2020
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6U5F
| CryoEM Structure of Pyocin R2 - precontracted - collar | Descriptor: | Collar PA0615, Sheath PA0622, Tube PA0623 | Authors: | Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H. | Deposit date: | 2019-08-27 | Release date: | 2020-04-15 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (3.8 Å) | Cite: | Action of a minimal contractile bactericidal nanomachine. Nature, 580, 2020
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6U5J
| CryoEM Structure of Pyocin R2 - postcontracted - collar | Descriptor: | Collar PA0615, Sheath PA0622 | Authors: | Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H. | Deposit date: | 2019-08-27 | Release date: | 2020-04-15 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Action of a minimal contractile bactericidal nanomachine. Nature, 580, 2020
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4GLY
| Human urokinase-type plasminogen activator uPA in complex with the two-disulfide bridge peptide UK504 | Descriptor: | BICYCLIC PEPTIDE INHIBITOR UK504, CHLORIDE ION, GLYCEROL, ... | Authors: | Buth, S.A, Leiman, P.G, Chen, S, Heinis, C. | Deposit date: | 2012-08-15 | Release date: | 2013-05-15 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.518 Å) | Cite: | Bicyclic Peptide Ligands Pulled out of Cysteine-Rich Peptide Libraries. J.Am.Chem.Soc., 135, 2013
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6CL5
| Structure of P. aeruginosa R1 pyocin fiber PALES_06171 comprising C-terminal residues 323-701 | Descriptor: | FE (III) ION, MAGNESIUM ION, SODIUM ION, ... | Authors: | Buth, S.A, Shneider, M.M, Leiman, P.G. | Deposit date: | 2018-03-01 | Release date: | 2018-06-27 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (2.324 Å) | Cite: | Structure and Analysis of R1 and R2 Pyocin Receptor-Binding Fibers. Viruses, 10, 2018
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6CL6
| Structure of P. aeruginosa R2 pyocin fiber PA0620 comprising C-terminal residues 323-691 | Descriptor: | 1,2-ETHANEDIOL, CALCIUM ION, FE (III) ION, ... | Authors: | Buth, S.A, Shneider, M.M, Leiman, P.G. | Deposit date: | 2018-03-01 | Release date: | 2018-06-27 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.898 Å) | Cite: | Structure and Analysis of R1 and R2 Pyocin Receptor-Binding Fibers. Viruses, 10, 2018
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