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PDB: 227 results

4HAB
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BU of 4hab by Molmil
Crystal structure of Plk1 Polo-box domain in complex with PL-49
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, PHOSPHATE ION, PL-49, ...
Authors:Lee, W.C, Song, J.H, Kim, H.Y.
Deposit date:2012-09-26
Release date:2013-04-03
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Development of cyclic peptomer inhibitors targeting the polo-box domain of polo-like kinase 1.
Bioorg.Med.Chem., 21, 2013
4HY2
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BU of 4hy2 by Molmil
Crystal structure of Plk1 Polo-box domain in complex with PL-42
Descriptor: PL-42, Serine/threonine-protein kinase PLK1
Authors:Lee, W.C, Song, J.H, Kim, H.Y.
Deposit date:2012-11-12
Release date:2013-04-03
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of cyclic peptomer inhibitors targeting the polo-box domain of polo-like kinase 1.
Bioorg.Med.Chem., 21, 2013
2MVF
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BU of 2mvf by Molmil
Structural insight into an essential assembly factor network on the pre-ribosome
Descriptor: Uncharacterized protein
Authors:Lee, W, Bassler, J, Paternoga, H, Holdermann, I, Thomas, M, Granneman, S, Barrio-Garcia, C, Nyarko, A, Stier, G, Clark, S.A, Schraivogel, D, Kallas, M, Beckmann, R, Tollervey, D, Barbar, E, Sinning, I, Hurt, E.
Deposit date:2014-10-02
Release date:2014-12-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A network of assembly factors is involved in remodeling rRNA elements during preribosome maturation.
J.Cell Biol., 207, 2014
1FMX
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BU of 1fmx by Molmil
STRUCTURE OF NATIVE PROTEINASE A IN THE SPACE GROUP P21
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SACCHAROPEPSIN, ...
Authors:Gustchina, A, Li, M, Phylip, L.H, Lees, W.E, Kay, J, Wlodawer, A.
Deposit date:2000-08-18
Release date:2002-07-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:An unusual orientation for Tyr75 in the active site of the aspartic proteinase from Saccharomyces cerevisiae.
Biochem.Biophys.Res.Commun., 295, 2002
1G0V
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BU of 1g0v by Molmil
THE STRUCTURE OF PROTEINASE A COMPLEXED WITH A IA3 MUTANT, MVV
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEASE A INHIBITOR 3, PROTEINASE A, ...
Authors:Phylip, L.H, Lees, W, Brownsey, B.G, Bur, D, Dunn, B.M, Winther, J, Gustchina, A, Li, M, Copeland, T, Wlodawer, A, Kay, J.
Deposit date:2000-10-09
Release date:2001-04-21
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:The potency and specificity of the interaction between the IA3 inhibitor and its target aspartic proteinase from Saccharomyces cerevisiae.
J.Biol.Chem., 276, 2001
1FMU
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BU of 1fmu by Molmil
STRUCTURE OF NATIVE PROTEINASE A IN P3221 SPACE GROUP.
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, SACCHAROPEPSIN, ...
Authors:Gustchina, A, Li, M, Phylip, L.H, Lees, W.E, Kay, J, Wlodawer, A.
Deposit date:2000-08-18
Release date:2002-07-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An unusual orientation for Tyr75 in the active site of the aspartic proteinase from Saccharomyces cerevisiae.
Biochem.Biophys.Res.Commun., 295, 2002
1MBB
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BU of 1mbb by Molmil
OXIDOREDUCTASE
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, URIDINE DIPHOSPHO-N-ACETYLENOLPYRUVYLGLUCOSAMINE REDUCTASE, URIDINE-DIPHOSPHATE-3(N-ACETYLGLUCOSAMINYL)BUTYRIC ACID
Authors:Benson, T.E, Lees, W.J, Walsh, C.T, Hogle, J.M.
Deposit date:1995-11-07
Release date:1996-10-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:(E)-enolbutyryl-UDP-N-acetylglucosamine as a mechanistic probe of UDP-N-acetylenolpyruvylglucosamine reductase (MurB).
Biochemistry, 35, 1996
1DPJ
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BU of 1dpj by Molmil
THE STRUCTURE OF PROTEINASE A COMPLEXED WITH IA3 PEPTIDE INHIBITOR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEINASE A, PROTEINASE INHIBITOR IA3 PEPTIDE, ...
Authors:Li, M, Phylip, H.L, Lees, W.E, Winther, J.R, Dunn, B.M, Wlodawer, A, Kay, J, Guschina, A.
Deposit date:1999-12-27
Release date:2000-05-03
Last modified:2021-07-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The aspartic proteinase from Saccharomyces cerevisiae folds its own inhibitor into a helix.
Nat.Struct.Biol., 7, 2000
1DP5
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BU of 1dp5 by Molmil
THE STRUCTURE OF PROTEINASE A COMPLEXED WITH A IA3 MUTANT INHIBITOR
Descriptor: PROTEINASE A, PROTEINASE INHIBITOR IA3, beta-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Li, M, Phylip, H.L, Lees, W.E, Winther, J.R, Dunn, B.M, Wlodawer, A, Kay, J, Guschina, A.
Deposit date:1999-12-23
Release date:2000-05-03
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The aspartic proteinase from Saccharomyces cerevisiae folds its own inhibitor into a helix.
Nat.Struct.Biol., 7, 2000
3X0Y
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BU of 3x0y by Molmil
Crystal structure of FMN-bound DszC from Rhodococcus erythropolis D-1
Descriptor: DszC, FLAVIN MONONUCLEOTIDE
Authors:Guan, L.J, Lee, W.C, Wang, S.P, Ohtsuka, J, Tanokura, M.
Deposit date:2014-10-23
Release date:2015-02-25
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of apo-DszC and FMN-bound DszC from Rhodococcus erythropolis D-1.
Febs J., 282, 2015
3X0X
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BU of 3x0x by Molmil
Crystal structure of apo-DszC from Rhodococcus erythropolis D-1
Descriptor: DszC
Authors:Guan, L.J, Lee, W.C, Wang, S.P, Ohtsuka, J, Tanokura, M.
Deposit date:2014-10-23
Release date:2015-02-25
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structures of apo-DszC and FMN-bound DszC from Rhodococcus erythropolis D-1.
Febs J., 282, 2015
5CZY
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BU of 5czy by Molmil
Crystal structure of LegAS4
Descriptor: GLYCEROL, Legionella effector LegAS4, S-ADENOSYLMETHIONINE
Authors:Son, J, Hwang, K.Y, Lee, W.C.
Deposit date:2015-08-01
Release date:2015-09-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Legionella pneumophila type IV secretion system effector LegAS4
Biochem.Biophys.Res.Commun., 465, 2015
6POR
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BU of 6por by Molmil
Antimicrobial lasso peptide ubonodin
Descriptor: Ubonodin
Authors:Link, A.J, Cheung-Lee, W.L.
Deposit date:2019-07-05
Release date:2019-12-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Discovery of Ubonodin, an Antimicrobial Lasso Peptide Active against Members of the Burkholderia cepacia Complex.
Chembiochem, 21, 2020
6WQE
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BU of 6wqe by Molmil
Solution Structure of the IWP-051-bound H-NOX from Shewanella woodyi in the Fe(II)CO ligation state
Descriptor: 5-fluoro-2-{1-[(2-fluorophenyl)methyl]-5-(1,2-oxazol-3-yl)-1H-pyrazol-3-yl}pyrimidin-4-ol, CARBON MONOXIDE, Heme NO binding domain protein, ...
Authors:Chen, C.Y, Lee, W, Montfort, W.R.
Deposit date:2020-04-28
Release date:2020-07-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structures of the Shewanella woodyi H-NOX protein in the presence and absence of soluble guanylyl cyclase stimulator IWP-051.
Protein Sci., 30, 2021
1MNL
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BU of 1mnl by Molmil
HIGH-RESOLUTION SOLUTION STRUCTURE OF A SWEET PROTEIN SINGLE-CHAIN MONELLIN (SCM) DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND DYNAMICAL SIMULATED ANNEALING CALCULATIONS, 21 STRUCTURES
Descriptor: MONELLIN
Authors:Lee, S.-Y, Lee, J.-H, Chang, H.-J, Jo, J.-M, Jung, J.-W, Lee, W.
Deposit date:1998-08-06
Release date:1999-06-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a sweet protein single-chain monellin determined by nuclear magnetic resonance and dynamical simulated annealing calculations.
Biochemistry, 38, 1999
6XE4
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BU of 6xe4 by Molmil
BTK Fluorocyclopropyl amide inhibitor, Compound 25
Descriptor: (1S,2S)-N-[2'-(6-tert-butyl-8-fluoro-1-oxophthalazin-2(1H)-yl)-3'-(hydroxymethyl)-1-methyl-6-oxo[1,6-dihydro[3,4'-bipyridine]]-5-yl]-2-fluorocyclopropane-1-carboxamide, SULFATE ION, Tyrosine-protein kinase BTK
Authors:Kiefer, J.R, Crawford, J.J, Lee, W, Eigenbrot, C, Yu, C.
Deposit date:2020-06-11
Release date:2020-07-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Stereochemical Differences in Fluorocyclopropyl Amides Enable Tuning of Btk Inhibition and Off-Target Activity.
Acs Med.Chem.Lett., 11, 2020
6O6W
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BU of 6o6w by Molmil
Solution structure of human myeloid-derived growth factor
Descriptor: Myeloid-derived growth factor
Authors:Bortnov, V, Tonelli, M, Lee, W, Markley, J.L, Mosher, D.F.
Deposit date:2019-03-07
Release date:2019-11-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of human myeloid-derived growth factor suggests a conserved function in the endoplasmic reticulum.
Nat Commun, 10, 2019
5J4G
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BU of 5j4g by Molmil
Crystal structure of the C-terminally His6-tagged HP0902, an uncharacterized protein from Helicobacter pylori 26695
Descriptor: Uncharacterized protein
Authors:Sim, D.W, Lee, W.C, Kim, H.Y, Kim, J.H, Won, H.S.
Deposit date:2016-04-01
Release date:2017-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural identification of the lipopolysaccharide-binding capability of a cupin-family protein from Helicobacter pylori
FEBS Lett., 590, 2016
6CGH
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BU of 6cgh by Molmil
Solution structure of the four-helix bundle region of human J-protein Zuotin, a component of ribosome-associated complex (RAC)
Descriptor: DnaJ homolog subfamily C member 2
Authors:Shrestha, O.K, Lee, W, Tonelli, M, Cornilescu, G, Markley, J.L, Ciesielski, S.J, Craig, E.A.
Deposit date:2018-02-20
Release date:2019-06-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and evolution of the 4-helix bundle domain of Zuotin, a J-domain protein co-chaperone of Hsp70.
Plos One, 14, 2019
6OCV
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BU of 6ocv by Molmil
Solution structure of the H-NOX protein from Shewanella woodyi in the Fe(II)CO ligation state
Descriptor: CARBON MONOXIDE, Heme NO binding domain protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Chen, C.Y, Lee, W, Montfort, W.R.
Deposit date:2019-03-25
Release date:2020-05-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structures of the Shewanella woodyi H-NOX protein in the presence and absence of soluble guanylyl cyclase stimulator IWP-051.
Protein Sci., 30, 2021
6X6N
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BU of 6x6n by Molmil
NMR structure of the putative GTPase-Activating (GAP) domain of VopE
Descriptor: Outer membrane virulence protein yopE
Authors:Smith, K.P, Lee, W, Tonelli, M.
Deposit date:2020-05-28
Release date:2021-12-22
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution structure and dynamics of the mitochondrial-targeted GTPase-activating protein (GAP) VopE by an integrated NMR/SAXS approach.
Protein Sci., 31, 2022
5J4F
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BU of 5j4f by Molmil
Crystal structure of the N-terminally His6-tagged HP0902, an uncharacterized protein from Helicobacter pylori 26695
Descriptor: Uncharacterized protein
Authors:Sim, D.-W, Lee, W.-C, Kim, H.Y, Kim, J.-H, Won, H.-S.
Deposit date:2016-04-01
Release date:2017-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural identification of the lipopolysaccharide-binding capability of a cupin-family protein from Helicobacter pylori
FEBS Lett., 590, 2016
6DTW
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BU of 6dtw by Molmil
HIV-1 Reverse Transcriptase Y181C Mutant in complex with JLJ 578
Descriptor: 8-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-6-fluoroindolizine-2-carbonitrile, MAGNESIUM ION, Reverse transcriptase/ribonuclease H, ...
Authors:Sasaki, T, Gannam, Z.T.K, Anderson, K.S, Jorgensen, W.L, Lee, W.
Deposit date:2018-06-18
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.742 Å)
Cite:Molecular and cellular studies evaluating a potent 2-cyanoindolizine catechol diether NNRTI targeting wildtype and Y181C mutant HIV-1 reverse transcriptase.
Bioorg.Med.Chem.Lett., 29, 2019
1CQ0
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BU of 1cq0 by Molmil
SOLUTION STRUCTURE OF A HUMAN HYPOCRETIN-2/OREXIN-B'SOLUTION STRUCTURE OF A HUMAN HYPOCRETIN-2/OREXIN-B '
Descriptor: PROTEIN (NEW HYPOTHALAMIC NEUROPEPTIDE/OREXIN-B28)
Authors:Lee, K.-H, Bang, E.J, Chae, K.-J, Lee, D.W, Lee, W.
Deposit date:1999-08-04
Release date:2000-01-10
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Solution structure of a new hypothalamic neuropeptide, human hypocretin-2/orexin-B.
Eur.J.Biochem., 266, 1999
6Q1X
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BU of 6q1x by Molmil
Lasso peptide pandonodin
Descriptor: Pandonodin
Authors:Link, A.J, Cheung-Lee, W.L.
Deposit date:2019-08-06
Release date:2019-12-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Pandonodin: A Proteobacterial Lasso Peptide with an Exceptionally Long C-Terminal Tail.
Acs Chem.Biol., 14, 2019

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