Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 797 件

7L8J
DownloadVisualize
BU of 7l8j by Molmil
SARS-CoV-2 Main Protease (Mpro) in Complex with Rupintrivir (P21212)
分子名称: 3C-like proteinase, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
著者Lockbaum, G.J, Henes, M, Lee, J.M, Timm, J, Nalivaika, E.A, Yilmaz, N.K, Thompson, P.R, Schiffer, C.A.
登録日2020-12-31
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Pan-3C Protease Inhibitor Rupintrivir Binds SARS-CoV-2 Main Protease in a Unique Binding Mode.
Biochemistry, 60, 2021
7L8H
DownloadVisualize
BU of 7l8h by Molmil
EV68 3C protease (3Cpro) in Complex with Rupintrivir
分子名称: 3C Protease, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
著者Lockbaum, G.J, Henes, M, Lee, J.M, Timm, J, Nalivaika, E.A, Yilmaz, N.K, Thompson, P.R, Schiffer, C.A.
登録日2020-12-31
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Pan-3C Protease Inhibitor Rupintrivir Binds SARS-CoV-2 Main Protease in a Unique Binding Mode.
Biochemistry, 60, 2021
6JZL
DownloadVisualize
BU of 6jzl by Molmil
S-formylglutathione hydrolase homolog from a psychrophilic bacterium of Shewanella frigidimarina
分子名称: S-formylglutathione hydrolase
著者Lee, C.W, Lee, J.H.
登録日2019-05-02
公開日2019-09-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structural and functional characterization of a novel cold-active S-formylglutathione hydrolase (SfSFGH) homolog from Shewanella frigidimarina, a psychrophilic bacterium.
Microb. Cell Fact., 18, 2019
3ROU
DownloadVisualize
BU of 3rou by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
著者Knapp, J, White, M.A, Lee, J.C.
登録日2011-04-26
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
6BVB
DownloadVisualize
BU of 6bvb by Molmil
Crystal structure of HIF-2alpha-pVHL-elongin B-elongin C
分子名称: Elongin-B, Elongin-C, Hypoxia-Inducible Factor 2 alpha, ...
著者Tarade, D, Ohh, M, Lee, J.E.
登録日2017-12-12
公開日2018-08-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献HIF-2 alpha-pVHL complex reveals broad genotype-phenotype correlations in HIF-2 alpha-driven disease.
Nat Commun, 9, 2018
2KCC
DownloadVisualize
BU of 2kcc by Molmil
Solution Structure of biotinoyl domain from human acetyl-CoA carboxylase 2
分子名称: Acetyl-CoA carboxylase 2
著者Lee, C, Cheong, H, Ryu, K, Lee, J, Lee, W, Jeon, Y, Cheong, C.
登録日2008-12-19
公開日2009-02-17
最終更新日2023-09-27
実験手法SOLUTION NMR
主引用文献Biotinoyl domain of human acetyl-CoA carboxylase: Structural insights into the carboxyl transfer mechanism.
Proteins, 72, 2008
3E2J
DownloadVisualize
BU of 3e2j by Molmil
Crystal structure of bovine coupling factor B
分子名称: ATP synthase subunit s, mitochondrial, MAGNESIUM ION
著者Stroud, R.M, Lee, J.K, Belogrudov, G.I.
登録日2008-08-05
公開日2008-08-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of bovine mitochondrial factor B at 0.96-A resolution.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3TJ6
DownloadVisualize
BU of 3tj6 by Molmil
human vinculin head domain (Vh1, residues 1-258) in complex with the vinculin binding site of the surface cell antigen 4 (sca4-VBS-C; residues 812-835) from Rickettsia rickettsii
分子名称: Antigenic heat-stable 120 kDa protein, Vinculin
著者Park, H, Lee, J.H, Gouin, E, Cossart, P, Izard, T.
登録日2011-08-23
公開日2011-09-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献The rickettsia surface cell antigen 4 applies mimicry to bind to and activate vinculin.
J.Biol.Chem., 286, 2011
3RPQ
DownloadVisualize
BU of 3rpq by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, PHOSPHATE ION
著者Knapp, J, White, M.A, Lee, J.C.
登録日2011-04-27
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
3RYP
DownloadVisualize
BU of 3ryp by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL
著者Knapp, J, White, M.A, Lee, J.C.
登録日2011-05-11
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
3QOP
DownloadVisualize
BU of 3qop by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL
著者Knapp, J, White, M.A, Lee, J.C.
登録日2011-02-10
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Domain-Domain Flexibility Leads to Allostery within the Camp Receptor Protein (Crp)
To be Published
3RYR
DownloadVisualize
BU of 3ryr by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
著者Knapp, J, White, M.A, Lee, J.C.
登録日2011-05-11
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
5ZZ6
DownloadVisualize
BU of 5zz6 by Molmil
Redox-sensing transcriptional repressor Rex
分子名称: ADENOSINE-5'-DIPHOSPHATE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Redox-sensing transcriptional repressor Rex 1
著者Park, Y.W, Jang, Y.Y, Joo, H.K, Lee, J.Y.
登録日2018-05-30
公開日2018-11-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Analysis of Redox-sensing Transcriptional Repressor Rex from Thermotoga maritima
Sci Rep, 8, 2018
4JPR
DownloadVisualize
BU of 4jpr by Molmil
Structure of the ASLV fusion subunit core
分子名称: ASLV fusion TM, CHLORIDE ION
著者Aydin, H, Smrke, B.M, Lee, J.E.
登録日2013-03-19
公開日2013-10-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural characterization of a fusion glycoprotein from a retrovirus that undergoes a hybrid 2-step entry mechanism.
Faseb J., 27, 2013
3RDI
DownloadVisualize
BU of 3rdi by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
著者Knapp, J, White, M.A, Lee, J.C.
登録日2011-04-01
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
7CQ0
DownloadVisualize
BU of 7cq0 by Molmil
Crystal structure of Streptoavidin-C1 from Streptomyces cinamonensis
分子名称: Mature Streptoavidin-C1
著者Jeon, B.J, Kim, S, Lee, J.-H, Kim, M.S, Hwang, K.Y.
登録日2020-08-08
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Insights into the structure of mature streptavidin C1 from Streptomyces cinnamonensis reveal the self-binding of the extension C-terminal peptide to biotin-binding sites.
Iucrj, 8, 2021
7CPZ
DownloadVisualize
BU of 7cpz by Molmil
Crystal structure of Streptoavidin-C1 from Streptomyces cinamonensis
分子名称: BIOTIN, Mature Streptoavidin-C1
著者Jeon, B.J, Kim, S, Lee, J.-H, Kim, M.S, Hwang, K.Y.
登録日2020-08-08
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insights into the structure of mature streptavidin C1 from Streptomyces cinnamonensis reveal the self-binding of the extension C-terminal peptide to biotin-binding sites.
Iucrj, 8, 2021
3CRG
DownloadVisualize
BU of 3crg by Molmil
Crystal structure of human fibroblast growth factor-1 with mutations Glu81Ala, Glu82Asn and Lys101Ala
分子名称: FORMIC ACID, GLYCEROL, Heparin-binding growth factor 1, ...
著者Meher, A.K, Honjo, E, Kuroki, R, Lee, J, Somasundaram, T, Blaber, M.
登録日2008-04-07
公開日2009-02-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Engineering an improved crystal contact across a solvent-mediated interface of human fibroblast growth factor 1.
Acta Crystallogr.,Sect.F, 65, 2009
3MR3
DownloadVisualize
BU of 3mr3 by Molmil
Human DNA polymerase eta - DNA ternary complex with the 3'T of a CPD in the active site (TT1)
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*CP*AP*(TTD)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA (5'-D(*CP*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
著者Biertumpfel, C, Zhao, Y, Ramon-Maiques, S, Gregory, M.T, Lee, J.Y, Yang, W.
登録日2010-04-28
公開日2010-06-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and mechanism of human DNA polymerase eta.
Nature, 465, 2010
3MR5
DownloadVisualize
BU of 3mr5 by Molmil
Human DNA polymerase eta - DNA ternary complex with a CPD 1bp upstream of the active site (TT3)
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*AP*CP*GP*TP*CP*AP*TP*AP*A)-3'), DNA (5'-D(*TP*AP*AP*CP*(TTD)P*AP*TP*GP*AP*CP*GP*A)-3'), ...
著者Biertumpfel, C, Zhao, Y, Ramon-Maiques, S, Gregory, M.T, Lee, J.Y, Yang, W.
登録日2010-04-28
公開日2010-06-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and mechanism of human DNA polymerase eta.
Nature, 465, 2010
3E2W
DownloadVisualize
BU of 3e2w by Molmil
H. influenzae beta-carbonic anhydrase, variant Y181F with 1M bicarbonate
分子名称: BICARBONATE ION, Carbonic anhydrase 2, SULFATE ION, ...
著者Rowlett, R.S, Lee, J.
登録日2008-08-06
公開日2009-08-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.296 Å)
主引用文献Allosteric site variants of Haemophilus influenzae beta-carbonic anhydrase.
Biochemistry, 48, 2009
7UJV
DownloadVisualize
BU of 7ujv by Molmil
Structure of PHD2 in complex with HIF2a-CODD
分子名称: Egl nine homolog 1, Endothelial PAS domain-containing protein 1, FE (III) ION, ...
著者Ferens, F.G, Tarade, D, Lee, J.E, Ohh, M.
登録日2022-03-31
公開日2023-04-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Deficiency in PHD2-mediated hydroxylation of HIF2 alpha underlies Pacak-Zhuang syndrome.
Commun Biol, 7, 2024
2GEF
DownloadVisualize
BU of 2gef by Molmil
Crystal structure of a Novel viral protease with a serine/lysine catalytic dyad mechanism
分子名称: Protease VP4
著者Paetzel, M, Feldman, A.R, Lee, J, Delmas, B.
登録日2006-03-20
公開日2006-05-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a novel viral protease with a serine/lysine catalytic dyad mechanism
J.Mol.Biol., 358, 2006
3E24
DownloadVisualize
BU of 3e24 by Molmil
H. influenzae beta-carbonic anhydrase, variant W39F
分子名称: Carbonic anhydrase 2, PHOSPHATE ION, ZINC ION
著者Rowlett, R.S, Lee, J.
登録日2008-08-05
公開日2009-06-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Allosteric site variants of Haemophilus influenzae beta-carbonic anhydrase.
Biochemistry, 48, 2009
3MR6
DownloadVisualize
BU of 3mr6 by Molmil
Human DNA polymerase eta - DNA ternary complex with a CPD 2bp upstream of the active site (TT4)
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*C*AP*TP*CP*AP*(TTD)P*AP*CP*GP*AP*GP*C)-3'), DNA (5'-D(*TP*CP*TP*CP*GP*TP*AP*AP*T)-3'), ...
著者Biertumpfel, C, Zhao, Y, Ramon-Maiques, S, Gregory, M.T, Lee, J.Y, Yang, W.
登録日2010-04-28
公開日2010-06-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and mechanism of human DNA polymerase eta.
Nature, 465, 2010

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon