Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 793 件

7WG3
DownloadVisualize
BU of 7wg3 by Molmil
Structural basis of interleukin-17B receptor in complex with a neutralizing antibody D9 for guiding humanization and affinity maturation for cancer therapy
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of D9 Fab, IL17RB protein, ...
著者Lee, W.H, Chen, X.R, Liu, I.J, Lee, J.H, Hu, C.M, Wu, H.C, Wang, S.K, Lee, W.H, Ma, C.
登録日2021-12-28
公開日2022-11-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structural basis of interleukin-17B receptor in complex with a neutralizing antibody for guiding humanization and affinity maturation.
Cell Rep, 41, 2022
5GS2
DownloadVisualize
BU of 5gs2 by Molmil
Crystal structure of diabody complex with repebody and MBP
分子名称: Maltose-binding periplasmic protein, anti-MBP, anti-repebody, ...
著者Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
登録日2016-08-13
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.592 Å)
主引用文献Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
7CM4
DownloadVisualize
BU of 7cm4 by Molmil
Crystal Structure of COVID-19 virus spike receptor-binding domain complexed with a neutralizing antibody CT-P59
分子名称: 1,2-ETHANEDIOL, IgG heavy chain, IgG light chain, ...
著者Kim, Y.G, Jeong, J.H, Bae, J.S, Lee, J.
登録日2020-07-24
公開日2021-01-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献A therapeutic neutralizing antibody targeting receptor binding domain of SARS-CoV-2 spike protein.
Nat Commun, 12, 2021
1N6A
DownloadVisualize
BU of 1n6a by Molmil
Structure of SET7/9
分子名称: S-ADENOSYLMETHIONINE, SET domain-containing protein 7
著者Kwon, T.W, Chang, J.H, Kwak, E, Lee, C.W, Joachimiak, A, Kim, Y.C, Lee, J, Cho, Y.
登録日2002-11-09
公開日2003-02-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mechanism of histone lysine methyl transfer revealed by the structure of SET7/9-AdoMet
EMBO J., 22, 2003
1WOG
DownloadVisualize
BU of 1wog by Molmil
Crystal Structure of Agmatinase Reveals Structural Conservation and Inhibition Mechanism of the Ureohydrolase Superfamily
分子名称: HEXANE-1,6-DIAMINE, MANGANESE (II) ION, agmatinase
著者Ahn, H.J, Kim, K.H, Lee, J, Ha, J.-Y, Lee, H.H, Kim, D, Yoon, H.-J, Kwon, A.-R, Suh, S.W.
登録日2004-08-18
公開日2004-09-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of agmatinase reveals structural conservation and inhibition mechanism of the ureohydrolase superfamily
J.Biol.Chem., 279, 2004
1WOH
DownloadVisualize
BU of 1woh by Molmil
Crystal Structure of Agmatinase Reveals Structural Conservation and Inhibition Mechanism of the Ureohydrolase Superfamily
分子名称: agmatinase
著者Ahn, H.J, Kim, K.H, Lee, J, Ha, J.-Y, Lee, H.H, Kim, D, Yoon, H.-J, Kwon, A.-R, Suh, S.W.
登録日2004-08-18
公開日2004-09-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of agmatinase reveals structural conservation and inhibition mechanism of the ureohydrolase superfamily
J.Biol.Chem., 279, 2004
1IX1
DownloadVisualize
BU of 1ix1 by Molmil
Crystal Structure of P.aeruginosa Peptide deformylase Complexed with Antibiotic Actinonin
分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, ACTINONIN, ZINC ION, ...
著者Kim, H.-W, Yoon, H.-J, Lee, J.Y, Han, B.W, Yang, J.K, Lee, B.I, Ahn, H.J, Lee, H.H, Suh, S.W.
登録日2002-06-07
公開日2003-09-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of peptide deformylase from Staphylococcus aureus in complex with actinonin, a naturally occurring antibacterial agent
Proteins, 57, 2004
1WOI
DownloadVisualize
BU of 1woi by Molmil
Crystal Structure of Agmatinase Reveals Structural Conservation and Inhibition Mechanism of the Ureohydrolase Superfamily
分子名称: MANGANESE (II) ION, agmatinase
著者Ahn, H.J, Kim, K.H, Lee, J, Ha, J.-Y, Lee, H.H, Kim, D, Yoon, H.-J, Kwon, A.-R, Suh, S.W.
登録日2004-08-18
公開日2004-09-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of agmatinase reveals structural conservation and inhibition mechanism of the ureohydrolase superfamily
J.Biol.Chem., 279, 2004
1J38
DownloadVisualize
BU of 1j38 by Molmil
Crystal Structure of Drosophila AnCE
分子名称: ZINC ION, angiotensin converting enzyme
著者Kim, H.M, Shin, D.R, Lee, H, Lee, J.-O.
登録日2003-01-20
公開日2003-07-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Drosophila angiotensin I-converting enzyme bound to captopril and lisinopril
Febs Lett., 538, 2003
1J9J
DownloadVisualize
BU of 1j9j by Molmil
CRYSTAL STRUCTURE ANALYSIS OF SURE PROTEIN FROM T.MARITIMA
分子名称: MAGNESIUM ION, STATIONARY PHASE SURVIVAL PROTEIN, SULFATE ION
著者Suh, S.W, Lee, J.Y, Kwak, J.E, Moon, J.
登録日2001-05-27
公開日2001-09-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure and functional analysis of the SurE protein identify a novel phosphatase family.
Nat.Struct.Biol., 8, 2001
5TSP
DownloadVisualize
BU of 5tsp by Molmil
Crystal structure of the catalytic domain of Clostridium perfringens neuraminidase (NanI) in complex with a CHES
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, Sialidase
著者Lee, Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Kang, J.Y, Jin, M.S, Ryu, Y.B, Park, K.H, Eom, S.H.
登録日2016-10-31
公開日2017-03-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Crystal structure of the catalytic domain of Clostridium perfringens neuraminidase in complex with a non-carbohydrate-based inhibitor, 2-(cyclohexylamino)ethanesulfonic acid
Biochem. Biophys. Res. Commun., 486, 2017
8CZ7
DownloadVisualize
BU of 8cz7 by Molmil
Crystal structure of SARS-CoV-2 Mpro with compound C2
分子名称: 3C-like proteinase, N-[(4-chlorothiophen-2-yl)methyl]-2-(isoquinolin-4-yl)-N-(4-methoxyphenyl)acetamide
著者Worrall, L.J, Lee, J, Strynadka, N.C.J.
登録日2022-05-24
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants.
Emerg Microbes Infect, 12, 2023
8CYZ
DownloadVisualize
BU of 8cyz by Molmil
Crystal structure of SARS-CoV-2 Mpro with compound C4
分子名称: 3C-like proteinase, N-[(4-chlorothiophen-2-yl)methyl]-2-(isoquinolin-4-yl)-N-[4-(methylsulfanyl)phenyl]acetamide
著者Worrall, L.J, Lee, J, Strynadka, N.C.J.
登録日2022-05-24
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants.
Emerg Microbes Infect, 12, 2023
8CYU
DownloadVisualize
BU of 8cyu by Molmil
Crystal structure of SARS-CoV-2 Mpro with compound C5
分子名称: 3C-like proteinase, N-[(4-chlorothiophen-2-yl)methyl]-N-[4-(dimethylamino)phenyl]-2-(isoquinolin-4-yl)acetamide
著者Worrall, L.J, Lee, J, Strynadka, N.C.J.
登録日2022-05-24
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants.
Emerg Microbes Infect, 12, 2023
8CZ4
DownloadVisualize
BU of 8cz4 by Molmil
Crystal structure of SARS-CoV-2 Mpro with compound C3
分子名称: 3C-like proteinase, N-(4-tert-butylphenyl)-N-[(4-chlorothiophen-2-yl)methyl]-2-(isoquinolin-4-yl)acetamide
著者Worrall, L.J, Lee, J, Strynadka, N.C.J.
登録日2022-05-24
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants.
Emerg Microbes Infect, 12, 2023
4MM2
DownloadVisualize
BU of 4mm2 by Molmil
Crystal structure of yeast primase catalytic subunit
分子名称: CADMIUM ION, CITRIC ACID, DNA primase small subunit
著者Park, K.R, An, J.Y, Lee, Y, Youn, H.S, Lee, J.G, Kang, J.Y, Kim, T.G, Lim, J.J, Eom, S.H, Wang, J.
登録日2013-09-07
公開日2014-09-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of yeast primase catalytic subunit
To be Published
7VPF
DownloadVisualize
BU of 7vpf by Molmil
Crystal structure of a novel putative sugar isomerase from the psychrophilic bacterium Paenibacillus sp. R4
分子名称: CALCIUM ION, Xylose isomerase, ZINC ION
著者Park, H.H, Lee, J.H, Kwon, S.
登録日2021-10-16
公開日2021-12-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.983 Å)
主引用文献Crystal structure of a novel putative sugar isomerase from the psychrophilic bacterium Paenibacillus sp. R4.
Biochem.Biophys.Res.Commun., 585, 2021
7NFX
DownloadVisualize
BU of 7nfx by Molmil
Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Jomaa, A, Lee, J.H, Shan, S, Ban, N.
登録日2021-02-08
公開日2021-06-02
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Receptor compaction and GTPase rearrangement drive SRP-mediated cotranslational protein translocation into the ER.
Sci Adv, 7, 2021
4XTT
DownloadVisualize
BU of 4xtt by Molmil
Structural Studies of Potassium Transport Protein KtrA Regulator of Conductance of K+ (RCK) C domain in Complex with Cyclic Diadenosine Monophosphate (c-di-AMP)
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Putative potassium transport protein
著者Kim, H, Youn, S.J, Kim, S.O, Ko, J, Lee, J.O, Choi, B.S.
登録日2015-01-24
公開日2015-05-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.708 Å)
主引用文献Structural Studies of Potassium Transport Protein KtrA Regulator of Conductance of K+ (RCK) C Domain in Complex with Cyclic Diadenosine Monophosphate (c-di-AMP)
J.Biol.Chem., 290, 2015
6ILB
DownloadVisualize
BU of 6ilb by Molmil
Native crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
分子名称: 1,2-ETHANEDIOL, Fructuronate-tagaturonate epimerase UxaE, MANGANESE (II) ION
著者Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
登録日2018-10-17
公開日2019-10-23
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To be published
5GRU
DownloadVisualize
BU of 5gru by Molmil
Structure of mono-specific diabody
分子名称: Maltose-binding periplasmic protein, diabody protein
著者Kim, J.H, Song, D.H, Youn, S.J, Cho, G, Lee, H, Lee, J.O.
登録日2016-08-12
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.955 Å)
主引用文献Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
6ILA
DownloadVisualize
BU of 6ila by Molmil
Two Glycerol complexed Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
分子名称: Fructuronate-tagaturonate epimerase UxaE, GLYCEROL, PHOSPHATE ION, ...
著者Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
登録日2018-10-17
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To be published
5H0P
DownloadVisualize
BU of 5h0p by Molmil
Crystal structure of EF-hand protein mutant
分子名称: CALCIUM ION, EF-hand domain-containing protein D2
著者Park, K.R, An, J.Y, Kang, J.Y, Lee, J.G, Youn, H.S, Lee, Y, Mun, S.A, Jun, C.D, Song, W.K, Eom, S.H.
登録日2016-10-06
公開日2017-09-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.862 Å)
主引用文献Structural mechanism underlying regulation of human EFhd2/Swiprosin-1 actin-bundling activity by Ser183 phosphorylation.
Biochem. Biophys. Res. Commun., 483, 2017
6IL9
DownloadVisualize
BU of 6il9 by Molmil
One Glycerol complexed Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
分子名称: Fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi in complex with 1 glycerol, GLYCEROL, ZINC ION
著者Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
登録日2018-10-17
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.72005355 Å)
主引用文献Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To Be Published
5XMH
DownloadVisualize
BU of 5xmh by Molmil
Crystal structure of an IgM rheumatoid factor YES8c in complex with IgG1 Fc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin gamma-1 heavy chain, ...
著者Shiroishi, M, Shimokawa, K, Lee, J.M, Kusakabe, M, Ueda, T.
登録日2017-05-15
公開日2018-03-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure-function analyses of a stereotypic rheumatoid factor unravel the structural basis for germline-encoded antibody autoreactivity.
J. Biol. Chem., 293, 2018

222036

件を2024-07-03に公開中

PDB statisticsPDBj update infoContact PDBjnumon