Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 797 results

1Q0K
DownloadVisualize
BU of 1q0k by Molmil
Crystal structure of Ni-containing superoxide dismutase with Ni-ligation corresponding to the thiosulfate-reduced state
Descriptor: NICKEL (II) ION, SULFATE ION, Superoxide dismutase [Ni], ...
Authors:Wuerges, J, Lee, J.-W, Yim, Y.-I, Yim, H.-S, Kang, S.-O, Djinovic Carugo, K.
Deposit date:2003-07-16
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of nickel-containing superoxide dismutase reveals another type of active site
Proc.Natl.Acad.Sci.USA, 101, 2004
2FB8
DownloadVisualize
BU of 2fb8 by Molmil
Structure of the B-Raf kinase domain bound to SB-590885
Descriptor: (1Z)-5-(2-{4-[2-(DIMETHYLAMINO)ETHOXY]PHENYL}-5-PYRIDIN-4-YL-1H-IMIDAZOL-4-YL)INDAN-1-ONE OXIME, B-Raf proto-oncogene serine/threonine-protein kinase
Authors:Lougheed, J.C, Lee, J, Chau, D.C, Stout, T.J.
Deposit date:2005-12-08
Release date:2006-12-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Demonstration of a genetic therapeutic index for tumors expressing oncogenic BRAF by the kinase inhibitor SB-590885.
Cancer Res., 66, 2006
3BPF
DownloadVisualize
BU of 3bpf by Molmil
Crystal Structure of Falcipain-2 with Its inhibitor, E64
Descriptor: Cysteine protease falcipain-2, GLYCEROL, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE
Authors:kerr, I.D, Lee, J.H, Brinen, L.S.
Deposit date:2007-12-18
Release date:2008-12-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of falcipain-2 and falcipain-3 bound to small molecule inhibitors: implications for substrate specificity.
J.Med.Chem., 52, 2009
3MCD
DownloadVisualize
BU of 3mcd by Molmil
Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
Descriptor: Cell division topological specificity factor
Authors:Kang, G.B, Song, H.E, Kim, M.K, Youn, H.S, Lee, J.G, An, J.Y, Jeon, H, Chun, J.S, Eom, S.H.
Deposit date:2010-03-29
Release date:2010-05-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
Mol.Microbiol., 76, 2010
1Q0D
DownloadVisualize
BU of 1q0d by Molmil
Crystal structure of Ni-containing superoxide dismutase with Ni-ligation corresponding to the oxidized state
Descriptor: NICKEL (III) ION, SULFATE ION, Superoxide dismutase [Ni]
Authors:Wuerges, J, Lee, J.-W, Yim, Y.-I, Yim, H.-S, Kang, S.-O, Djinovic Carugo, K.
Deposit date:2003-07-16
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of nickel-containing superoxide dismutase reveals another type of active site
Proc.Natl.Acad.Sci.USA, 101, 2004
4JGH
DownloadVisualize
BU of 4jgh by Molmil
Structure of the SOCS2-Elongin BC complex bound to an N-terminal fragment of Cullin5
Descriptor: Cullin-5, Suppressor of cytokine signaling 2, Transcription elongation factor B polypeptide 1, ...
Authors:Kim, Y.K, Kwak, M.J, Ku, B, Suh, H.Y, Joo, K, Lee, J, Jung, J.U, Oh, B.H.
Deposit date:2013-03-01
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of intersubunit recognition in elongin BC-cullin 5-SOCS box ubiquitin-protein ligase complexes.
Acta Crystallogr.,Sect.D, 69, 2013
5ZLP
DownloadVisualize
BU of 5zlp by Molmil
Crystal structure of glutamine synthetase from helicobacter pylori
Descriptor: (2S)-2-AMINO-4-[METHYL(PHOSPHONOOXY)PHOSPHORYL]BUTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Joo, H.K, Lee, J.Y.
Deposit date:2018-03-29
Release date:2018-08-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Structural Analysis of Glutamine Synthetase from Helicobacter pylori.
Sci Rep, 8, 2018
1Q0G
DownloadVisualize
BU of 1q0g by Molmil
Crystal structure of Ni-containing superoxide dismutase with Ni-ligation corresponding to the state after full x-ray-induced reduction
Descriptor: NICKEL (II) ION, SULFATE ION, Superoxide dismutase [Ni]
Authors:Wuerges, J, Lee, J.-W, Yim, Y.-I, Yim, H.-S, Kang, S.-O, Djinovic Carugo, K.
Deposit date:2003-07-16
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of nickel-containing superoxide dismutase reveals another type of active site
Proc.Natl.Acad.Sci.USA, 101, 2004
5WUX
DownloadVisualize
BU of 5wux by Molmil
TNFalpha-certolizumab Fab
Descriptor: Tumor necrosis factor alpha, heavy, light
Authors:Heo, Y.S, Lee, J.U.
Deposit date:2016-12-21
Release date:2017-06-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular Basis for the Neutralization of Tumor Necrosis Factor alpha by Certolizumab Pegol in the Treatment of Inflammatory Autoimmune Diseases
Int J Mol Sci, 18, 2017
3TUD
DownloadVisualize
BU of 3tud by Molmil
Crystal structure of SYK kinase domain with N-(4-methyl-3-(8-methyl-7-oxo-2-(phenylamino)-7,8-dihydropyrido[2,3-d]pyrimidin-6-yl)phenyl)-3-(trifluoromethyl)benzamide
Descriptor: N-{4-methyl-3-[8-methyl-7-oxo-2-(phenylamino)-7,8-dihydropyrido[2,3-d]pyrimidin-6-yl]phenyl}-3-(trifluoromethyl)benzamide, Tyrosine-protein kinase SYK
Authors:Lovering, F, McDonald, J, Whitlock, G, Glossop, P, Phillips, C, Sabnis, Y, Ryan, M, Fitz, L, Lee, J, Chang, J.S, Han, S, Kurumbail, R, Thorarenson, A.
Deposit date:2011-09-16
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Identification of Type-II Inhibitors Using Kinase Structures.
Chem.Biol.Drug Des., 80, 2012
4PKX
DownloadVisualize
BU of 4pkx by Molmil
The structure of a conserved Piezo channel domain reveals a novel beta sandwich fold
Descriptor: Protein C10C5.1, isoform i
Authors:Kamajaya, A, Kaiser, J, Lee, J, Reid, M, Rees, D.C.
Deposit date:2014-05-15
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:The Structure of a Conserved Piezo Channel Domain Reveals a Topologically Distinct beta Sandwich Fold.
Structure, 22, 2014
3BVK
DownloadVisualize
BU of 3bvk by Molmil
Structural basis for the iron uptake mechanism of Helicobacter pylori ferritin
Descriptor: FE (III) ION, Ferritin, GLYCEROL
Authors:Kim, K.H, Cho, K.J, Lee, J.H, Shin, H.J, Yang, I.S.
Deposit date:2008-01-07
Release date:2009-01-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for the iron uptake mechanism of Helicobacter pylori ferritin
To be Published
3BVL
DownloadVisualize
BU of 3bvl by Molmil
Structural basis for the iron uptake mechanism of Helicobacter pylori ferritin
Descriptor: FE (III) ION, Ferritin, GLYCEROL
Authors:Kim, K.H, Cho, K.J, Lee, J.H, Shin, H.J, Yang, I.S.
Deposit date:2008-01-07
Release date:2009-01-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the iron uptake mechanism of Helicobacter pylori ferritin
To be Published
1BV2
DownloadVisualize
BU of 1bv2 by Molmil
LIPID TRANSFER PROTEIN FROM RICE SEEDS, NMR, 14 STRUCTURES
Descriptor: NONSPECIFIC LIPID TRANSFER PROTEIN
Authors:Poznanski, J, Sodano, P, Suh, S.W, Lee, J.Y, Ptak, M, Vovelle, F.
Deposit date:1998-09-21
Release date:1999-05-18
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of a lipid transfer protein extracted from rice seeds. Comparison with homologous proteins.
Eur.J.Biochem., 259, 1999
3N29
DownloadVisualize
BU of 3n29 by Molmil
Crystal structure of carboxynorspermidine decarboxylase complexed with Norspermidine from Campylobacter jejuni
Descriptor: Carboxynorspermidine decarboxylase, GLYCEROL, N-(3-aminopropyl)propane-1,3-diamine, ...
Authors:Deng, X, Lee, J, Michael, A.J, Tomchick, D.R, Goldsmith, E.J, Phillips, M.A.
Deposit date:2010-05-17
Release date:2010-06-09
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evolution of substrate specificity within a diverse family of beta/alpha-barrel-fold basic amino acid decarboxylases: X-ray structure determination of enzymes with specificity for L-arginine and carboxynorspermidine.
J.Biol.Chem., 285, 2010
4MN0
DownloadVisualize
BU of 4mn0 by Molmil
Spatial structure of the novel light-sensitive photoprotein berovin from the ctenophore Beroe abyssicola in the Ca2+-loaded apoprotein conformation state
Descriptor: Berovin, CALCIUM ION, MAGNESIUM ION
Authors:Liu, Z.J, Stepanyuk, G.A, Vysotski, E.S, Lee, J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2013-09-09
Release date:2013-10-16
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Spatial structure of the novel light-sensitive photoprotein berovin from the ctenophore Beroe abyssicola in the Ca(2+)-loaded apoprotein conformation state.
Biochim.Biophys.Acta, 1834, 2013
6JKW
DownloadVisualize
BU of 6jkw by Molmil
Seleno-methionine PNGM-1 from deep-sea sediment metagenome
Descriptor: Metallo-beta-lactamases PNGM-1, ZINC ION
Authors:Hong, M.K, Park, K.S, Jeon, J.H, Lee, J.H, Park, Y.S, Lee, S.H, Kang, L.W.
Deposit date:2019-03-02
Release date:2019-04-17
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:PNGM 1 a novel subclass B3 metallo beta lactamase from a deep sea sediment metagenome
Journal of Global Antimicrobial Resistance, 14, 2018
1YNX
DownloadVisualize
BU of 1ynx by Molmil
Solution structure of DNA binding domain A (DBD-A) of S.cerevisiae Replication Protein A (RPA)
Descriptor: Replication factor-A protein 1
Authors:Park, C.J, Lee, J.H, Choi, B.S.
Deposit date:2005-01-26
Release date:2006-01-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the DNA-binding domain of RPA from Saccharomyces cerevisiae and its interaction with single-stranded DNA and SV40 T antigen
Nucleic Acids Res., 33, 2005
2AXY
DownloadVisualize
BU of 2axy by Molmil
Crystal Structure of KH1 domain of human Poly(C)-binding protein-2 with C-rich strand of human telomeric DNA
Descriptor: C-rich strand of human telomeric dna, Poly(rC)-binding protein 2
Authors:Du, Z, Lee, J.K, Tjhen, R.J, Li, S, Stroud, R.M, James, T.L.
Deposit date:2005-09-06
Release date:2005-09-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the First KH Domain of Human Poly(C)-binding Protein-2 in Complex with a C-rich Strand of Human Telomeric DNA at 1.7 A
J.Biol.Chem., 280, 2005
1XNH
DownloadVisualize
BU of 1xnh by Molmil
Crystal Structure of NH3-dependent NAD+ synthetase from Helicobacter pylori
Descriptor: NH(3)-dependent NAD(+) synthetase
Authors:Kang, G.B, Kim, Y.S, Im, Y.J, Rho, S.H, Lee, J.H, Eom, S.H.
Deposit date:2004-10-05
Release date:2005-04-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of NH3-dependent NAD+ synthetase from Helicobacter pylori
Proteins, 58, 2005
3BVE
DownloadVisualize
BU of 3bve by Molmil
Structural basis for the iron uptake mechanism of Helicobacter pylori ferritin
Descriptor: Ferritin, GLYCEROL
Authors:Kim, K.H, Cho, K.J, Lee, J.H, Shin, H.J, Yang, I.S.
Deposit date:2008-01-07
Release date:2009-01-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the iron uptake mechanism of Helicobacter pylori ferritin
To be Published
7XCB
DownloadVisualize
BU of 7xcb by Molmil
Crystal structure of the mouse interleukin-9
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-9
Authors:Kim, J.W, Lee, J.-O, Park, S.M.
Deposit date:2022-03-23
Release date:2023-03-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of the mouse interleukin-9
To Be Published
4PKE
DownloadVisualize
BU of 4pke by Molmil
The structure of a conserved Piezo channel domain reveals a novel beta sandwich fold
Descriptor: PLATINUM (II) ION, Protein C10C5.1, isoform i
Authors:Kamajaya, A, Kaiser, J, Lee, J, Reid, M, Rees, D.C.
Deposit date:2014-05-14
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Structure of a Conserved Piezo Channel Domain Reveals a Topologically Distinct beta Sandwich Fold.
Structure, 22, 2014
4N1G
DownloadVisualize
BU of 4n1g by Molmil
Crystal Structure of Ca(2+)- discharged F88Y obelin mutant from Obelia longissima at 1.50 Angstrom resolution
Descriptor: CALCIUM ION, N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE, Obelin
Authors:Natashin, P.V, Markova, S.V, Lee, J, Vysotski, E.S, Liu, Z.J.
Deposit date:2013-10-04
Release date:2014-02-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of the F88Y obelin mutant before and after bioluminescence provide molecular insight into spectral tuning among hydromedusan photoproteins
Febs J., 281, 2014
1Q0F
DownloadVisualize
BU of 1q0f by Molmil
Crystal structure of Ni-containing superoxide dismutase with Ni-ligation corresponding to the state after partial x-ray-induced reduction
Descriptor: NICKEL (III) ION, SULFATE ION, Superoxide dismutase [Ni]
Authors:Wuerges, J, Lee, J.-W, Yim, Y.-I, Yim, H.-S, Kang, S.-O, Djinovic Carugo, K.
Deposit date:2003-07-16
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of nickel-containing superoxide dismutase reveals another type of active site
Proc.Natl.Acad.Sci.USA, 101, 2004

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon