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PDB: 219 results

4MRY
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BU of 4mry by Molmil
Crystal Structure of Ca(2+)- discharged Y138F obelin mutant from Obelia longissima at 1.30 Angstrom resolution
Descriptor: CALCIUM ION, N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE, Obelin
Authors:Natashin, P.V, Ding, W, Eremeeva, E.V, Markova, S.V, Lee, J, Vysotski, E.S, Liu, Z.J.
Deposit date:2013-09-17
Release date:2014-03-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.299 Å)
Cite:Structures of the Ca2+-regulated photoprotein obelin Y138F mutant before and after bioluminescence support the catalytic function of a water molecule in the reaction.
Acta Crystallogr.,Sect.D, 70, 2014
3SNV
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BU of 3snv by Molmil
Crystal structure of Symfoil-4T Permutation #1: de novo designed beta-trefoil architecture with symmetric primary structure
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, Symfoil-4T/Permutation #1 synthetic protein
Authors:Blaber, M, Longo, L, Lee, J.
Deposit date:2011-06-29
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Folding pathway redundancy in symmetric protein architecture
To be Published
3RV5
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BU of 3rv5 by Molmil
Crystal structure of human cardiac troponin C regulatory domain in complex with cadmium and deoxycholic acid
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, CADMIUM ION, CALCIUM ION, ...
Authors:Li, A.Y, Lee, J, Borek, D, Otwinowski, Z, Tibbits, G, Paetzel, M.
Deposit date:2011-05-06
Release date:2011-08-31
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of cardiac troponin C regulatory domain in complex with cadmium and deoxycholic Acid reveals novel conformation.
J.Mol.Biol., 413, 2011
3S2P
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BU of 3s2p by Molmil
Crystal structure of CDK2 with a 2-aminopyrimidine compound
Descriptor: (3S,4S)-1-{3-[2-amino-6-(propan-2-yl)pyrimidin-4-yl]-4-hydroxyphenyl}pyrrolidine-3,4-diol, Cyclin-dependent kinase 2
Authors:Kim, K.-H, Lee, J, Jeong, S.
Deposit date:2011-05-17
Release date:2011-07-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of a novel class of 2-aminopyrimidines as CDK1 and CDK2 inhibitors
Bioorg.Med.Chem.Lett., 21, 2011
3Q7X
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BU of 3q7x by Molmil
Crystal structure of Symfoil-4P/PV1: de novo designed beta-trefoil architecture with symmetric primary structure, primitive version 1
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, de novo designed beta-trefoil architecture with symmetric primary structure
Authors:Blaber, M, Lee, J.
Deposit date:2011-01-05
Release date:2012-01-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein.
Proc.Natl.Acad.Sci.USA, 110, 2013
2HB1
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BU of 2hb1 by Molmil
Crystal Structure of PTP1B with Monocyclic Thiophene Inhibitor
Descriptor: 4-BROMO-3-(CARBOXYMETHOXY)THIOPHENE-2-CARBOXYLIC ACID, Tyrosine-protein phosphatase non-receptor type 1
Authors:Xu, W, Wan, Z.-K, Lee, J.
Deposit date:2006-06-13
Release date:2006-08-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Monocyclic thiophenes as protein tyrosine phosphatase 1B inhibitors: Capturing interactions with Asp48.
Bioorg.Med.Chem.Lett., 16, 2006
2HZ9
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BU of 2hz9 by Molmil
Crystal structure of Lys12Val/Asn95Val/Cys117Val mutant of human acidic fibroblast growth factor at 1.70 angstrom resolution.
Descriptor: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
Authors:Dubey, V.K, Lee, J, Somasundaram, T, Blaber, M.
Deposit date:2006-08-08
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Spackling the Crack: Stabilizing Human Fibroblast Growth Factor-1 by Targeting the N and C terminus beta-Strand Interactions
J.Mol.Biol., 371, 2007
2HQ8
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BU of 2hq8 by Molmil
Crystal structure of coelenterazine-binding protein from renilla muelleri in the ca loaded apo form
Descriptor: CALCIUM ION, Coelenterazine-binding protein ca-bound apo form
Authors:Stepanyuk, G, Liu, Z.J, Vysotski, E.S, Lee, J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2006-07-18
Release date:2006-09-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of coelenterazine-binding protein from Renilla muelleri at 1.7 A: why it is not a calcium-regulated photoprotein.
PHOTOCHEM.PHOTOBIOL.SCI., 7, 2008
2HPS
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BU of 2hps by Molmil
Crystal structure of coelenterazine-binding protein from Renilla Muelleri
Descriptor: C2-HYDROXY-COELENTERAZINE, GLYCEROL, coelenterazine-binding protein with bound coelenterazine
Authors:Stepanyuk, G, Liu, Z.J, Vysotski, E.S, Lee, J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2006-07-17
Release date:2007-01-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of coelenterazine-binding protein from Renilla muelleri at 1.7 A: why it is not a calcium-regulated photoprotein.
PHOTOCHEM.PHOTOBIOL.SCI., 7, 2008
2HWA
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BU of 2hwa by Molmil
Crystal structure of Lys12Thr/Cys117Val mutant of human acidic fibroblast growth factor at 1.65 angstrom resolution.
Descriptor: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
Authors:Dubey, V.K, Lee, J, Somasundaram, T, Blaber, M.
Deposit date:2006-08-01
Release date:2007-06-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Spackling the crack: stabilizing human fibroblast growth factor-1 by targeting the N and C terminus beta-strand interactions.
J.Mol.Biol., 371, 2007
2HW9
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BU of 2hw9 by Molmil
Crystal structure of Lys12Cys/Cys117Val mutant of human acidic fibroblast Growth factor at 1.60 angstrom resolution.
Descriptor: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
Authors:Dubey, V.K, Lee, J, Somasundaram, T, Blaber, M.
Deposit date:2006-08-01
Release date:2007-06-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Spackling the crack: stabilizing human fibroblast growth factor-1 by targeting the N and C terminus beta-strand interactions.
J.Mol.Biol., 371, 2007
2HWM
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BU of 2hwm by Molmil
Crystal structure of Lys12Val/Cys117Val mutant of human acidic fibroblast growth factor at 1.60 angstrom resolution
Descriptor: FORMIC ACID, Heparin-binding growth factor 1
Authors:Dubey, V.K, Lee, J, Somasundaram, T, Blaber, M.
Deposit date:2006-08-01
Release date:2007-06-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Spackling the crack: stabilizing human fibroblast growth factor-1 by targeting the N and C terminus beta-strand interactions.
J.Mol.Biol., 371, 2007
6WKT
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BU of 6wkt by Molmil
Cu(I)-bound Copper Storage Protein BsCsp3
Descriptor: Csp3
Authors:Chen, J.Z, Oken, A, Dennison, C, Lee, J, David, S.
Deposit date:2020-04-16
Release date:2021-04-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cu(I)-bound Copper Storage Protein BsCsp3
To Be Published
3E2X
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BU of 3e2x by Molmil
H. influenzae beta-carbonic anhydrase, variant V47A
Descriptor: Carbonic anhydrase 2, SULFATE ION, ZINC ION
Authors:Rowlett, R.S, Lee, J.
Deposit date:2008-08-06
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Evidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase .
Biochemistry, 49, 2010
3E31
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BU of 3e31 by Molmil
H. influenzae beta-carbonic anhydrase, variant V47A
Descriptor: Carbonic anhydrase 2, ZINC ION
Authors:Rowlett, R.S, Lee, J.
Deposit date:2008-08-05
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Evidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase .
Biochemistry, 49, 2010
8ORD
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BU of 8ord by Molmil
Cryo-EM map of zebrafish cardiac F-actin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha 1b, ...
Authors:Bradshaw, M, Squire, J.M, Morris, E, Atkinson, G, Richardson, B, Lees, J, Paul, D.M.
Deposit date:2023-04-13
Release date:2023-08-02
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Zebrafish as a model for cardiac disease; Cryo-EM structure of native cardiac thin filaments from Danio Rerio.
J.Muscle Res.Cell.Motil., 44, 2023
2HPW
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BU of 2hpw by Molmil
Green fluorescent protein from Clytia gregaria
Descriptor: Green fluorescent protein
Authors:Stepanyuk, G, Liu, Z.J, Vysotski, S.E, Lee, J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2006-07-17
Release date:2006-09-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of Green Fluorescent Protein from Clytia Gregaria at 1.55 A resolution
To be Published
1EZ3
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BU of 1ez3 by Molmil
CRYSTAL STRUCTURE OF THE NEURONAL T-SNARE SYNTAXIN-1A
Descriptor: SYNTAXIN-1A
Authors:Lerman, J.C, Robblee, J, Fairman, R, Hughson, F.M.
Deposit date:2000-05-09
Release date:2000-06-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of the neuronal SNARE protein syntaxin-1A.
Biochemistry, 39, 2000
2KPU
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BU of 2kpu by Molmil
NMR Structure of YbbR family protein Dhaf_0833 (residues 32-118) from Desulfitobacterium hafniense DCB-2: Northeast Structural Genomics Consortium target DhR29B
Descriptor: YbbR family protein
Authors:Cort, J.R, Ramelot, T.A, Yang, Y, Belote, R.L, Ciccosanti, C, Haleema, J, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-10-20
Release date:2009-12-08
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structures of domains I and IV from YbbR are representative of a widely distributed protein family.
Protein Sci., 20, 2011

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