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PDB: 211 results

8HGU
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Epoxide hydrolase from Bosea sp. PAMC 26642
Descriptor: Alpha/beta hydrolase
Authors:Lee, M.J, Hwang, J, Do, H, Lee, J.H.
Deposit date:2022-11-15
Release date:2023-11-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural insights into the distinct substrate preferences of two bacterial epoxide hydrolases.
Int.J.Biol.Macromol., 264, 2024
8HM5
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Epoxide hydrolase from Caballeronia sordidicola PAMC 26510
Descriptor: Epoxide hydrolase
Authors:Hwang, J, Lee, M.J, Do, H, Lee, J.H.
Deposit date:2022-12-02
Release date:2023-12-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural insights into the distinct substrate preferences of two bacterial epoxide hydrolases.
Int.J.Biol.Macromol., 264, 2024
4ZTT
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Crystal structures of ferritin mutants reveal diferric-peroxo intermediates
Descriptor: FE (II) ION, FE (III) ION, GLYCEROL, ...
Authors:Kim, S, Park, Y.H, Jung, S.W, Seok, J.H, Chung, Y.B, Lee, D.B, Gowda, G, Lee, J.H, Han, H.R, Cho, A.E, Lee, C, Chung, M.S, Kim, K.H.
Deposit date:2015-05-15
Release date:2016-06-15
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria.
J. Mol. Biol., 428, 2016
4ZZ7
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Crystal structure of methylmalonate-semialdehyde dehydrogenase (DddC) from Oceanimonas doudoroffii
Descriptor: Methylmalonate-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Do, H, Lee, C.W, Lee, S.G, Kang, H, Park, C.M, Kim, H.J, Park, H, Park, H, Lee, J.H.
Deposit date:2015-05-22
Release date:2016-04-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure and modeling of the tetrahedral intermediate state of methylmalonate-semialdehyde dehydrogenase (MMSDH) from Oceanimonas doudoroffii.
J. Microbiol., 54, 2016
5AYY
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BU of 5ayy by Molmil
CRYSTAL STRUCTURE OF HUMAN QUINOLINATE PHOSPHORIBOSYLTRANSFERASE IN COMPLEX WITH THE REACTANT QUINOLINATE
Descriptor: Nicotinate-nucleotide pyrophosphorylase [carboxylating], QUINOLINIC ACID
Authors:Youn, H.S, Kim, T.G, Kim, M.K, Kang, G.B, Kang, J.Y, Seo, Y.J, Lee, J.G, An, J.Y, Park, K.R, Lee, Y, Im, Y.J, Lee, J.H, Fukuoka, S.I, Eom, S.H.
Deposit date:2015-09-14
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Structural Insights into the Quaternary Catalytic Mechanism of Hexameric Human Quinolinate Phosphoribosyltransferase, a Key Enzyme in de novo NAD Biosynthesis
Sci Rep, 6, 2016
5AYZ
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CRYSTAL STRUCTURE OF HUMAN QUINOLINATE PHOSPHORIBOSYLTRANSFERASE IN COMPLEX WITH THE PRODUCT NICOTINATE MONONUCLEOTIDE
Descriptor: NICOTINATE MONONUCLEOTIDE, Nicotinate-nucleotide pyrophosphorylase [carboxylating]
Authors:Youn, H.S, Kim, T.G, Kim, M.K, Kang, G.B, Kang, J.Y, Seo, Y.J, Lee, J.G, An, J.Y, Park, K.R, Lee, Y, Im, Y.J, Lee, J.H, Fukuoka, S.I, Eom, S.H.
Deposit date:2015-09-14
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Insights into the Quaternary Catalytic Mechanism of Hexameric Human Quinolinate Phosphoribosyltransferase, a Key Enzyme in de novo NAD Biosynthesis
Sci Rep, 6, 2016
4HY8
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Structures of PR1 and PR2 intermediates from time-resolved laue crystallography
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Jung, Y.O, Lee, J.H, Kim, J, Schmidt, M, Vukica, S, Wulff, M, Moffat, K.
Deposit date:2012-11-13
Release date:2013-03-20
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
NAT.CHEM., 5, 2013
4I38
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BU of 4i38 by Molmil
Structures of IT intermediates from time-resolved laue crystallography collected at 14ID-B, APS
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Jung, Y.O, Lee, J.H, Kim, J, Schmidt, M, Vukica, S, Moffat, K, Ihee, H.
Deposit date:2012-11-26
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
NAT.CHEM., 5, 2013
4I3I
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BU of 4i3i by Molmil
Structures of IT intermediate of photoactive yellow protein E46Q mutant from time-resolved laue crystallography collected at 14ID APS
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Jung, Y.O, Lee, J.H, Kim, J, Schmidt, M, Vukica, S, Moffat, K, Ihee, H.
Deposit date:2012-11-26
Release date:2013-03-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
NAT.CHEM., 5, 2013
5C6F
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BU of 5c6f by Molmil
Crystal structures of ferritin mutants reveal side-on binding to diiron and end-on cleavage of oxygen
Descriptor: Bacterial non-heme ferritin, FE (III) ION, IMIDAZOLE
Authors:Kim, S, Kim, K.H, Seok, J.H, Park, Y.H, Jung, S.W, Chung, Y.B, Lee, D.B, Lee, J.H, Han, K.R, Cho, A.E, Lee, C, Chung, M.S.
Deposit date:2015-06-23
Release date:2016-07-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria.
J. Mol. Biol., 428, 2016
4EDB
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BU of 4edb by Molmil
Structures of monomeric hemagglutinin and its complex with an Fab fragment of a neutralizing antibody that binds to H1 subtype influenza viruses: molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses
Descriptor: Hemagglutinin
Authors:Kim, K.H, Cho, K.J, Lee, J.H, Park, Y.H, Khan, T.G, Lee, J.Y, Kang, S.H, Alam, I.
Deposit date:2012-03-27
Release date:2013-05-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insight into structural diversity of influenza virus haemagglutinin
J.Gen.Virol., 94, 2013
8JUO
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BU of 8juo by Molmil
Crystal structure of aspartate semialdehyde dehydrogenase from Porphyromonas gingivalis
Descriptor: Aspartate-semialdehyde dehydrogenase
Authors:Hwang, J, Do, H, Lee, J.H.
Deposit date:2023-06-27
Release date:2024-06-05
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Porphyromonas gingivalis.
Crystals, 13, 2023
8JUS
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BU of 8jus by Molmil
Crystal structure of aspartate semialdehyde dehydrogenase from Porphyromonas gingivalis complexed with 2',5'adenosine diphosphate
Descriptor: ADENOSINE-2'-5'-DIPHOSPHATE, Aspartate-semialdehyde dehydrogenase
Authors:Hwang, J, Do, H, Lee, J.H.
Deposit date:2023-06-27
Release date:2024-06-05
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Porphyromonas gingivalis.
Crystals, 13, 2023
4EDA
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BU of 4eda by Molmil
Structures of monomeric hemagglutinin and its complex with an Fab fragment of a neutralizing antibody that binds to H1 subtype influenza viruses: molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Kim, K.H, Cho, K.J, Lee, J.H, Park, Y.H, Khan, T.G, Lee, J.Y, Kang, S.H, Alam, I.
Deposit date:2012-03-27
Release date:2013-05-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Insight into structural diversity of influenza virus haemagglutinin
J.Gen.Virol., 94, 2013
5AYX
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BU of 5ayx by Molmil
Crystal structure of Human Quinolinate Phosphoribosyltransferase
Descriptor: Nicotinate-nucleotide pyrophosphorylase [carboxylating]
Authors:Kang, G.B, Kim, M.-K, Im, Y.J, Lee, J.H, Youn, H.-S, An, J.Y, Lee, J.-G, Fukuoka, S.-I, Eom, S.H.
Deposit date:2015-09-14
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Insights into the Quaternary Catalytic Mechanism of Hexameric Human Quinolinate Phosphoribosyltransferase, a Key Enzyme in de novo NAD Biosynthesis
Sci Rep, 6, 2016
4NR0
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BU of 4nr0 by Molmil
Crystal structure of the Pseudomonas aeruginosa Enoyl-Acyl Carrier Protein Reductase (FabI) in complex with NAD+ and triclosan
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH] FabI, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRICLOSAN
Authors:Chi, Y.M, Lee, J.H, Park, A.K.
Deposit date:2013-11-26
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Crystal Structures of Pseudomonas aeruginosa Enoyl-ACP Reductase (FabI) in the Presence and Absence of NAD+ and Triclosan
Bull.Korean Chem.Soc., 36, 2015
8HG9
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BU of 8hg9 by Molmil
Cytochrome P450 steroid hydroxylase (BaCYP106A6) from Bacillus species
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, cytochrome P450 steroid hydroxylase
Authors:Do, H, Lee, J.H.
Deposit date:2022-11-14
Release date:2023-07-26
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal Structure and Biochemical Analysis of a Cytochrome P450 Steroid Hydroxylase ( Ba CYP106A6) from Bacillus Species.
J Microbiol Biotechnol., 33, 2023
3EGM
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BU of 3egm by Molmil
Structural basis of iron transport gating in Helicobacter pylori ferritin
Descriptor: FE (III) ION, Ferritin, GLYCEROL
Authors:Kim, K.H, Cho, K.J, Shin, H.J, Lee, J.H.
Deposit date:2008-09-11
Release date:2009-07-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of ferritin from Helicobacter pylori reveals unusual conformational changes for iron uptake.
J.Mol.Biol., 390, 2009
4QIS
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BU of 4qis by Molmil
Crystal structure of Nitroalkane Oxidase from Pseudomonas aeruginosa
Descriptor: FLAVIN MONONUCLEOTIDE, Nitronate monooxygenase family protein
Authors:Chi, Y.M, Lee, J.H.
Deposit date:2014-06-02
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.906 Å)
Cite:Crystal structures and reaction mechanisms of nitroalkane oxidase (NAO) from Pseudomonas aeruginosa
To be Published
4QIT
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BU of 4qit by Molmil
Crystal structure of Nitroalkane Oxidase from Pseudomonas aeruginosa in mutant complex form
Descriptor: FLAVIN MONONUCLEOTIDE, Nitronate monooxygenase family protein, nitroethane
Authors:Chi, Y.M, Lee, J.H.
Deposit date:2014-06-02
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structures and reaction mechanisms of nitroalkane oxidase (NAO) from Pseudomonas aeruginosa
To be Published
4QIU
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BU of 4qiu by Molmil
Crystal structure of Nitroalkane Oxidase from Pseudomonas aeruginosa in Mutant complex form
Descriptor: 1-nitropropane, FLAVIN MONONUCLEOTIDE, Nitronate monooxygenase family protein
Authors:Chi, Y.M, Lee, J.H.
Deposit date:2014-06-02
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Crystal structures and reaction mechanisms of nitroalkane oxidase (NAO) from Pseudomonas aeruginosa
To be Published
4NQZ
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BU of 4nqz by Molmil
Crystal Structure of the Pseudomonas aeruginosa Enoyl-Acyl Carrier Protein Reductase (FabI) in apo form
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH] FabI
Authors:Chi, Y.M, Lee, J.H, Park, A.K.
Deposit date:2013-11-26
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Crystal Structures of Pseudomonas aeruginosa Enoyl-ACP Reductase (FabI) in the Presence and Absence of NAD+ and Triclosan
Bull.Korean Chem.Soc., 36, 2015
9ISP
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BU of 9isp by Molmil
DUF2436 domain which is frequently found in virulence proteins from Porphyromonas gingivalis
Descriptor: Protease PrtH
Authors:Kim, B, Hwang, J, Do, H, Lee, J.H.
Deposit date:2024-07-18
Release date:2024-10-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:First crystal structure of the DUF2436 domain of virulence proteins from Porphyromonas gingivalis.
Acta Crystallogr.,Sect.F, 80, 2024
5H7D
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BU of 5h7d by Molmil
Crystal structure of the YgjG-protein A-Zpa963-calmodulin complex
Descriptor: CALCIUM ION, Putrescine aminotransferase,Immunoglobulin G-binding protein A, Zpa963,Calmodulin
Authors:Youn, S.J, Kwon, N.Y, Lee, J.H, Kim, J.H, Lee, H, Lee, J.O.
Deposit date:2016-11-17
Release date:2017-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Construction of novel repeat proteins with rigid and predictable structures using a shared helix method.
Sci Rep, 7, 2017
5H75
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BU of 5h75 by Molmil
Crystal structure of the MrsD-Protein A fusion protein
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Mersacidin decarboxylase,Immunoglobulin G-binding protein A
Authors:Youn, S.J, Kwon, N.Y, Lee, J.H, Kim, J.H, Lee, H, Lee, J.O.
Deposit date:2016-11-17
Release date:2017-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.738 Å)
Cite:Construction of novel repeat proteins with rigid and predictable structures using a shared helix method.
Sci Rep, 7, 2017

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PDB entries from 2024-10-30

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