Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 835 results

2LXK
DownloadVisualize
BU of 2lxk by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for cold shock protein, LmCsp
Descriptor: Cold shock-like protein CspLA
Authors:Lee, J, Jeong, K, Kim, Y.
Deposit date:2012-08-27
Release date:2013-08-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Dynamic Features of Cold-Shock Proteins of Listeriamonocytogenes, a Psychrophilic Bacterium
Biochemistry, 52, 2013
7DOG
DownloadVisualize
BU of 7dog by Molmil
Crystal structure of a nuclease and capping domain of SbcD from Staphylococcus aureus
Descriptor: MANGANESE (II) ION, Nuclease SbcCD subunit D
Authors:Lee, J, Ha, N.-C.
Deposit date:2020-12-14
Release date:2021-05-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crystal structure of the nuclease and capping domain of SbcD from Staphylococcus aureus.
J.Microbiol, 59, 2021
2PLK
DownloadVisualize
BU of 2plk by Molmil
Crystal structure of lysine/ornithine decarboxylase complexed with cadaverine from Vibrio vulnificus
Descriptor: (4-{(E)-[(5-AMINOPENTYL)IMINO]METHYL}-5-HYDROXY-6-METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, lysine/ornithine decarboxylase
Authors:Lee, J, Goldsmith, E.J, Phillips, M.A.
Deposit date:2007-04-19
Release date:2007-07-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Phylogenetic diversity and the structural basis of substrate specificity in the beta/alpha-barrel fold basic amino acid decarboxylases.
J.Biol.Chem., 282, 2007
2PYY
DownloadVisualize
BU of 2pyy by Molmil
Crystal Structure of the GluR0 ligand-binding core from Nostoc punctiforme in complex with (L)-glutamate
Descriptor: GLUTAMIC ACID, Ionotropic glutamate receptor bacterial homologue
Authors:Lee, J.H, Kang, G.B, Lim, H.-H, Ree, M, Park, C.-S, Eom, S.H.
Deposit date:2007-05-17
Release date:2008-01-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the GluR0 ligand-binding core from Nostoc punctiforme in complex with L-glutamate: structural dissection of the ligand interaction and subunit interface.
J.Mol.Biol., 376, 2008
2PLJ
DownloadVisualize
BU of 2plj by Molmil
Crystal structure of lysine/ornithine decarboxylase complexed with putrescine from Vibrio vulnificus
Descriptor: (4-{[(4-AMINOBUTYL)AMINO]METHYL}-5-HYDROXY-6-METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, MAGNESIUM ION, lysine/ornithine decarboxylase
Authors:Lee, J, Goldsmith, E.J, Phillips, M.A.
Deposit date:2007-04-19
Release date:2007-07-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Phylogenetic diversity and the structural basis of substrate specificity in the beta/alpha-barrel fold basic amino acid decarboxylases.
J.Biol.Chem., 282, 2007
7JP1
DownloadVisualize
BU of 7jp1 by Molmil
Structure of wild-type substrate free SARS-CoV-2 Mpro.
Descriptor: 3C-like proteinase
Authors:Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
Deposit date:2020-08-07
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
7JW5
DownloadVisualize
BU of 7jw5 by Molmil
Crystal structure of WT-CYP199A4 in complex with 4-phenylbenzoic acid
Descriptor: CHLORIDE ION, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Lee, J.H.Z, Bruning, J.B, Bell, S.G.
Deposit date:2020-08-24
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.526 Å)
Cite:Different Geometric Requirements for Cytochrome P450-Catalyzed Aliphatic Versus Aromatic Hydroxylation Results in Chemoselective Oxidation
Acs Catalysis, 12, 2022
7JOY
DownloadVisualize
BU of 7joy by Molmil
Product structure of SARS-CoV-2 Mpro C145A mutant in complex with its C-terminal autoprocessing sequence.
Descriptor: 3C-like proteinase
Authors:Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
Deposit date:2020-08-07
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
7KHP
DownloadVisualize
BU of 7khp by Molmil
Acyl-enzyme intermediate structure of SARS-CoV-2 Mpro in complex with its C-terminal autoprocessing sequence.
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE
Authors:Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
Deposit date:2020-10-21
Release date:2020-10-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
6IKX
DownloadVisualize
BU of 6ikx by Molmil
UDP-glucose pyrophosphorylase from acinetobacter baumanii
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
Authors:Lee, J.H, Kang, L.W.
Deposit date:2018-10-16
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:UDP-glucose pyrophosphorylase from acinetobacter baumanii
To be published
6K8D
DownloadVisualize
BU of 6k8d by Molmil
UDP-glucose pyrophosphorylase with UPG from Acinetobacter Baumanii
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
Authors:Lee, J.H, Kang, L.W.
Deposit date:2019-06-11
Release date:2020-06-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:UDP-glucose pyrophosphorylase with UPG from Acinetobacter Baumanii
To be published
6KNL
DownloadVisualize
BU of 6knl by Molmil
Uridine and triphosphate-bound UGPase from acinetobacter baumannii
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, TRIPHOSPHATE, ...
Authors:Lee, J.H, Kang, L.W.
Deposit date:2019-08-05
Release date:2020-08-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Uridine and triphosphate-bound UGPase from acinetobacter baumannii
To be published
6IKZ
DownloadVisualize
BU of 6ikz by Molmil
UDP-glucose pyrophosphorylase from acinetobacter baumanii
Descriptor: GLYCEROL, PYROPHOSPHATE, SULFATE ION, ...
Authors:Lee, J.H, Kang, L.W.
Deposit date:2018-10-16
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:UTP-bound UGPase from acinetobacter baumanii
To be published
6KNJ
DownloadVisualize
BU of 6knj by Molmil
UTP-bound UGPase from acinetobacter baumannii
Descriptor: GLYCEROL, SULFATE ION, URIDINE 5'-TRIPHOSPHATE, ...
Authors:Lee, J.H, Kang, L.W.
Deposit date:2019-08-05
Release date:2020-08-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:UTP-bound UGPase from acinetobacter baumannii
To be published
6BQ1
DownloadVisualize
BU of 6bq1 by Molmil
Human PI4KIIIa lipid kinase complex
Descriptor: 5-{2-amino-1-[4-(morpholin-4-yl)phenyl]-1H-benzimidazol-6-yl}-N-(2-fluorophenyl)-2-methoxypyridine-3-sulfonamide, Phosphatidylinositol 4-kinase III alpha (PI4KA), Protein FAM126A, ...
Authors:Lees, J.A, Zhang, Y, Oh, M, Schauder, C.M, Yu, X, Baskin, J, Dobbs, K, Notarangelo, L.D, Camilli, P.D, Walz, T, Reinisch, K.M.
Deposit date:2017-11-27
Release date:2017-12-13
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Architecture of the human PI4KIII alpha lipid kinase complex.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TOD
DownloadVisualize
BU of 5tod by Molmil
Transmembrane protein 24 SMP domain
Descriptor: Transmembrane protein 24
Authors:Lees, J.A, Reinisch, K.M.
Deposit date:2016-10-17
Release date:2017-03-01
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Lipid transport by TMEM24 at ER-plasma membrane contacts regulates pulsatile insulin secretion.
Science, 355, 2017
7UJA
DownloadVisualize
BU of 7uja by Molmil
Cryo-EM structure of Human respiratory syncytial virus F variant (construct pXCS847A)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AM14 Fab heavy chain, AM14 Fab light chain, ...
Authors:Lees, J.A, Ammirati, M, Han, S.
Deposit date:2022-03-30
Release date:2023-04-19
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Rational design of a highly immunogenic prefusion-stabilized F glycoprotein antigen for a respiratory syncytial virus vaccine.
Sci Transl Med, 15, 2023
8TB7
DownloadVisualize
BU of 8tb7 by Molmil
Cryo-EM Structure of GPR61-
Descriptor: 6-{[(3,5-difluoropyridin-4-yl)methyl]amino}-N-(4-ethoxy-6-methylpyrimidin-2-yl)-2-methoxy-N-(2-methoxyethyl)pyridine-3-sulfonamide, Fab hinge-binding nanobody, Fab24 BAK5 heavy chain, ...
Authors:Lees, J.A, Dias, J.M, Han, S.
Deposit date:2023-06-28
Release date:2023-10-04
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:An inverse agonist of orphan receptor GPR61 acts by a G protein-competitive allosteric mechanism.
Nat Commun, 14, 2023
8TB0
DownloadVisualize
BU of 8tb0 by Molmil
Cryo-EM Structure of GPR61-G protein complex stabilized by scFv16
Descriptor: GPR61 fused to dominant negative G alpha S/I N18 chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Lees, J.A, Dias, J.M, Han, S.
Deposit date:2023-06-28
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:An inverse agonist of orphan receptor GPR61 acts by a G protein-competitive allosteric mechanism.
Nat Commun, 14, 2023
7L7K
DownloadVisualize
BU of 7l7k by Molmil
Cryo-EM structure of protein encoded by vaccine candidate BNT162b2
Descriptor: Spike glycoprotein
Authors:Lees, J.A, Han, S.
Deposit date:2020-12-28
Release date:2021-02-24
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:BNT162b vaccines protect rhesus macaques from SARS-CoV-2.
Nature, 592, 2021
7L7F
DownloadVisualize
BU of 7l7f by Molmil
Cryo-EM structure of human ACE2 receptor bound to protein encoded by vaccine candidate BNT162b1
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein, Envelope glycoprotein fusion
Authors:Lees, J.A, Han, S.
Deposit date:2020-12-28
Release date:2021-02-24
Last modified:2021-04-21
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:BNT162b vaccines protect rhesus macaques from SARS-CoV-2.
Nature, 592, 2021
7K1W
DownloadVisualize
BU of 7k1w by Molmil
PIKfyve/Fig4/Vac14 complex centered on Fig4 - map3
Descriptor: Fig4 Sac homology model
Authors:Lees, J.A, Reinisch, K.M, Li, P.
Deposit date:2020-09-08
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Insights into Lysosomal PI(3,5)P 2 Homeostasis from a Structural-Biochemical Analysis of the PIKfyve Lipid Kinase Complex.
Mol.Cell, 80, 2020
7K2V
DownloadVisualize
BU of 7k2v by Molmil
PIKfyve/Fig4/Vac14 complex centered on PIKfyve - map2
Descriptor: 1-phosphatidylinositol 3-phosphate 5-kinase
Authors:Lees, J.A, Reinisch, K.M, Li, P.
Deposit date:2020-09-09
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Insights into Lysosomal PI(3,5)P 2 Homeostasis from a Structural-Biochemical Analysis of the PIKfyve Lipid Kinase Complex.
Mol.Cell, 80, 2020
7K1Y
DownloadVisualize
BU of 7k1y by Molmil
PIKfyve/Fig4/Vac14 complex centered on Vac14 - map1
Descriptor: Vac14
Authors:Lees, J.A, Reinisch, K.M, Li, P.
Deposit date:2020-09-08
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.25 Å)
Cite:Insights into Lysosomal PI(3,5)P 2 Homeostasis from a Structural-Biochemical Analysis of the PIKfyve Lipid Kinase Complex.
Mol.Cell, 80, 2020
8X3N
DownloadVisualize
BU of 8x3n by Molmil
Thanatin VF16 in complex with LPS
Descriptor: VAL-PRO-ILE-ILE-TYR-CYS-ASN-ARG-ARG-THR-DLY-LYS-CYS-GLN-ARG-PHE
Authors:Swaleeha, J, Bhattacharyya, S.
Deposit date:2023-11-14
Release date:2024-03-06
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Thanatin VF16 in complex with LPS
To Be Published

226707

数据于2024-10-30公开中

PDB statisticsPDBj update infoContact PDBjnumon