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PDB: 439 results

8EX7
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Human S1P transporter Spns2 in an outward-facing partially occluded conformation (state 3)
Descriptor: Sphingosine-1-phosphate transporter SPNS2
Authors:Ahmed, S, Zhao, H, Dai, Y, Lee, C.H.
Deposit date:2022-10-24
Release date:2023-05-31
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Structural and functional insights into Spns2-mediated transport of sphingosine-1-phosphate.
Cell, 186, 2023
8EX8
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Human S1P transporter Spns2 in an outward-facing partially occluded conformation (state 2)
Descriptor: Sphingosine-1-phosphate transporter SPNS2
Authors:Ahmed, S, Zhao, H, Dai, Y, Lee, C.H.
Deposit date:2022-10-24
Release date:2023-05-31
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.17 Å)
Cite:Structural and functional insights into Spns2-mediated transport of sphingosine-1-phosphate.
Cell, 186, 2023
4ZZ7
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Crystal structure of methylmalonate-semialdehyde dehydrogenase (DddC) from Oceanimonas doudoroffii
Descriptor: Methylmalonate-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Do, H, Lee, C.W, Lee, S.G, Kang, H, Park, C.M, Kim, H.J, Park, H, Park, H, Lee, J.H.
Deposit date:2015-05-22
Release date:2016-04-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure and modeling of the tetrahedral intermediate state of methylmalonate-semialdehyde dehydrogenase (MMSDH) from Oceanimonas doudoroffii.
J. Microbiol., 54, 2016
5Z2D
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BU of 5z2d by Molmil
Dihydrodipicolinate reductase from Paenisporosarcina sp. TG-14
Descriptor: dihydrodipicolinate reductase
Authors:Lee, J.H, Lee, C.W, Park, S.
Deposit date:2018-01-02
Release date:2019-01-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of dihydrodipicolinate reductase (PaDHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor
Sci Rep, 8, 2018
5GPG
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BU of 5gpg by Molmil
Co-crystal structure of the FK506 binding domain of human FKBP25, Rapamycin and the FRB domain of human mTOR
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP3, RAPAMYCIN IMMUNOSUPPRESSANT DRUG, Serine/threonine-protein kinase mTOR
Authors:Lee, H.B, Lee, S.Y, Rhee, H.W, Lee, C.W.
Deposit date:2016-08-02
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Proximity-Directed Labeling Reveals a New Rapamycin-Induced Heterodimer of FKBP25 and FRB in Live Cells
Acs Cent.Sci., 2, 2016
1X3W
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BU of 1x3w by Molmil
Structure of a peptide:N-glycanase-Rad23 complex
Descriptor: UV excision repair protein RAD23, ZINC ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, ...
Authors:Lee, J.-H, Choi, J.M, Lee, C, Yi, K.J, Cho, Y.
Deposit date:2005-05-11
Release date:2005-06-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of a peptide:N-glycanase-Rad23 complex: insight into the deglycosylation for denatured glycoproteins.
Proc.Natl.Acad.Sci.Usa, 102, 2005
7YCJ
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BU of 7ycj by Molmil
Crystal structure of Vac8 bound to Vac17
Descriptor: Vacuolar protein 8, vacuole-related protein 17
Authors:Kim, H, Kim, H, Lee, C.
Deposit date:2022-07-01
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Crystal structure of Vac8 bound to Vac17
To Be Published
8KCM
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BU of 8kcm by Molmil
MmCPDII-DNA complex containing low-dosage, light induced repaired DNA.
Descriptor: Deoxyribodipyrimidine photo-lyase, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Maestre-Reyna, M, Wang, P.-H, Nango, E, Hosokawa, Y, Saft, M, Furrer, A, Yang, C.-H, Ngura Putu, E.P.G, Wu, W.-J, Emmerich, H.-J, Engilberge, S, Caramello, N, Wranik, M, Glover, H.L, Franz-Badur, S, Wu, H.-Y, Lee, C.-C, Huang, W.-C, Huang, K.-F, Chang, Y.-K, Liao, J.-H, Weng, J.-H, Gad, W, Chang, C.-W, Pang, A.H, Gashi, D, Beale, E, Ozerov, D, Milne, C, Cirelli, C, Bacellar, C, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Spadaccini, R, Royant, A, Yamamoto, J, Iwata, S, Standfuss, J, Essen, L.-O, Bessho, Y, Tsai, M.-D.
Deposit date:2023-08-08
Release date:2023-11-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Visualizing the DNA repair process by a photolyase at atomic resolution.
Science, 382, 2023
1WWL
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BU of 1wwl by Molmil
Crystal structure of CD14
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Monocyte differentiation antigen CD14
Authors:Kim, J.-I, Lee, C.J, Jin, M.S, Lee, C.-H, Paik, S.-G, Lee, H, Lee, J.-O.
Deposit date:2005-01-06
Release date:2005-02-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of CD14 and Its Implications for Lipopolysaccharide Signaling
J.Biol.Chem., 280, 2005
5BVS
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BU of 5bvs by Molmil
Linoleate-bound pFABP4
Descriptor: Fatty acid-binding protein, LINOLEIC ACID
Authors:Lee, J.H, Lee, C.W, Do, H.
Deposit date:2015-06-05
Release date:2015-08-05
Last modified:2015-09-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the ligand-binding specificity of fatty acid-binding proteins (pFABP4 and pFABP5) in gentoo penguin
Biochem.Biophys.Res.Commun., 465, 2015
9B1K
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BU of 9b1k by Molmil
Urate bound human URAT1 in the occluded state
Descriptor: Solute carrier family 22 member 12, URIC ACID
Authors:Dai, Y, Lee, C.H.
Deposit date:2024-03-13
Release date:2024-09-18
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Transport mechanism and structural pharmacology of human urate transporter URAT1.
Cell Res., 2024
9B1L
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BU of 9b1l by Molmil
Urate bound human URAT1 in the outward-facing state.
Descriptor: Solute carrier family 22 member 12, URIC ACID
Authors:Dai, Y, Lee, C.H.
Deposit date:2024-03-13
Release date:2024-09-18
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Transport mechanism and structural pharmacology of human urate transporter URAT1.
Cell Res., 2024
9B1F
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BU of 9b1f by Molmil
Human urate transporter 1 URAT1 in apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Solute carrier family 22 member 12
Authors:Dai, Y, Lee, C.H.
Deposit date:2024-03-13
Release date:2024-09-18
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Transport mechanism and structural pharmacology of human urate transporter URAT1.
Cell Res., 2024
5BVQ
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BU of 5bvq by Molmil
Ligand-unbound pFABP4
Descriptor: fatty acid-binding protein
Authors:Lee, J.H, Lee, C.W, Do, H.
Deposit date:2015-06-05
Release date:2015-08-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the ligand-binding specificity of fatty acid-binding proteins (pFABP4 and pFABP5) in gentoo penguin
Biochem.Biophys.Res.Commun., 465, 2015
4TLL
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BU of 4tll by Molmil
Crystal structure of GluN1/GluN2B NMDA receptor, structure 1
Descriptor: 1-AMINOCYCLOPROPANECARBOXYLIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[(1R,2S)-3-(4-benzylpiperidin-1-yl)-1-hydroxy-2-methylpropyl]phenol, ...
Authors:Gouaux, E, Lee, C.-H, Lu, W.
Deposit date:2014-05-30
Release date:2014-07-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:NMDA receptor structures reveal subunit arrangement and pore architecture.
Nature, 511, 2014
4TLM
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BU of 4tlm by Molmil
Crystal structure of GluN1/GluN2B NMDA receptor, structure 2
Descriptor: 1-AMINOCYCLOPROPANECARBOXYLIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[(1R,2S)-3-(4-benzylpiperidin-1-yl)-1-hydroxy-2-methylpropyl]phenol, ...
Authors:Gouaux, E, Lee, C.-H, Lu, W.
Deposit date:2014-05-30
Release date:2014-07-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.77 Å)
Cite:NMDA receptor structures reveal subunit arrangement and pore architecture.
Nature, 511, 2014
8SNL
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BU of 8snl by Molmil
Structure of human ADAM17/iRhom2 sheddase complex
Descriptor: CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 17, Inactive rhomboid protein 2, ...
Authors:Zhao, H, Dai, Y, Wang, Y, Lee, C.H.
Deposit date:2023-04-27
Release date:2024-05-29
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Structure of human ADAM17/iRhom2 sheddase complex
To Be Published
8SNN
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BU of 8snn by Molmil
Structure of mature human ADAM17/iRhom2 sheddase complex, conformation 1
Descriptor: CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 17, Inactive rhomboid protein 2
Authors:Zhao, H, Dai, Y, Wang, Y, Lee, C.H.
Deposit date:2023-04-27
Release date:2024-05-29
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:Structure of mature human ADAM17/iRhom2 sheddase complex, conformation 1
To Be Published
8SNO
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BU of 8sno by Molmil
Structure of mature human ADAM17/iRhom2 sheddase complex, conformation 2
Descriptor: CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 17, Inactive rhomboid protein 2
Authors:Zhao, H, Dai, Y, Wang, Y, Lee, C.H.
Deposit date:2023-04-27
Release date:2024-05-29
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Structure of mature human ADAM17/iRhom2 sheddase complex, conformation 2
To Be Published
8SNM
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BU of 8snm by Molmil
Structure of mature human ADAM17/iRhom2 sheddase complex in complex with ADAM17 prodomain
Descriptor: CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 17, Disintegrin and metalloproteinase domain-containing protein 17 propeptide, ...
Authors:Zhao, H, Dai, Y, Wang, Y, Lee, C.H.
Deposit date:2023-04-27
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Structure of mature human ADAM17/iRhom2 sheddase complex in complex with ADAM17 prodomain
To Be Published
5BVT
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BU of 5bvt by Molmil
Palmitate-bound pFABP5
Descriptor: Epidermal fatty acid-binding protein, PALMITOLEIC ACID
Authors:Lee, J.H, Lee, C.W, Do, H.
Deposit date:2015-06-05
Release date:2015-08-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis for the ligand-binding specificity of fatty acid-binding proteins (pFABP4 and pFABP5) in gentoo penguin
Biochem.Biophys.Res.Commun., 465, 2015
5WQ0
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BU of 5wq0 by Molmil
Receiver domain of Spo0A from Paenisporosarcina sp. TG-14
Descriptor: MAGNESIUM ION, Stage 0 sporulation protein
Authors:Lee, J.H, Lee, C.W.
Deposit date:2016-11-22
Release date:2017-03-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Crystal structure of the inactive state of the receiver domain of Spo0A from Paenisporosarcina sp. TG-14, a psychrophilic bacterium isolated from an Antarctic glacier
J. Microbiol., 55, 2017
1X3Z
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BU of 1x3z by Molmil
Structure of a peptide:N-glycanase-Rad23 complex
Descriptor: UV excision repair protein RAD23, ZINC ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, ...
Authors:Lee, J.-H, Choi, J.M, Lee, C, Yi, K.J, Cho, Y.
Deposit date:2005-05-11
Release date:2005-06-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a peptide:N-glycanase-Rad23 complex: insight into the deglycosylation for denatured glycoproteins.
Proc.Natl.Acad.Sci.Usa, 102, 2005
5C6F
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BU of 5c6f by Molmil
Crystal structures of ferritin mutants reveal side-on binding to diiron and end-on cleavage of oxygen
Descriptor: Bacterial non-heme ferritin, FE (III) ION, IMIDAZOLE
Authors:Kim, S, Kim, K.H, Seok, J.H, Park, Y.H, Jung, S.W, Chung, Y.B, Lee, D.B, Lee, J.H, Han, K.R, Cho, A.E, Lee, C, Chung, M.S.
Deposit date:2015-06-23
Release date:2016-07-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria.
J. Mol. Biol., 428, 2016
6II2
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BU of 6ii2 by Molmil
Crystal structure of alpha-beta hydrolase (ABH) and Makes Caterpillars Floppy (MCF)-Like effectors of Vibrio vulnificus MO6-24/O
Descriptor: Putative RTX-toxin
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyung, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019

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