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PDB: 148 results

4PIC
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BU of 4pic by Molmil
YwlE arginine phosphatase from Geobacillus stearothermophilus
Descriptor: Arginine phosphatase Ywle, PHOSPHATE ION, SULFATE ION
Authors:Clausen, T, Fuhrmann, J.
Deposit date:2014-05-08
Release date:2014-05-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Chasing phosphoarginine proteins: development of a selective enrichment method using a phosphatase trap.
Mol.Cell Proteomics, 2014
1D2F
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BU of 1d2f by Molmil
X-RAY STRUCTURE OF MALY FROM ESCHERICHIA COLI: A PYRIDOXAL-5'-PHOSPHATE-DEPENDENT ENZYME ACTING AS A MODULATOR IN MAL GENE EXPRESSION
Descriptor: MALY PROTEIN, PYRIDOXAL-5'-PHOSPHATE
Authors:Clausen, T.
Deposit date:1999-09-23
Release date:2000-01-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structure of MalY from Escherichia coli: a pyridoxal 5'-phosphate-dependent enzyme acting as a modulator in mal gene expression.
EMBO J., 19, 2000
1O8R
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BU of 1o8r by Molmil
Solution structure of human proguanylin
Descriptor: GUANYLIN
Authors:Lauber, T, Rosch, P, Marx, U.C.
Deposit date:2002-11-28
Release date:2003-04-24
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Solution Structure of Human Proguanylin: The Role of a Hormone Prosequence
J.Biol.Chem., 278, 2003
1ELQ
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BU of 1elq by Molmil
CRYSTAL STRUCTURE OF THE CYSTINE C-S LYASE C-DES
Descriptor: L-CYSTEINE/L-CYSTINE C-S LYASE, POTASSIUM ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Clausen, T, Kaiser, J.T, Steegborn, C, Huber, R, Kessler, D.
Deposit date:2000-03-14
Release date:2000-04-19
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the cystine C-S lyase from Synechocystis: stabilization of cysteine persulfide for FeS cluster biosynthesis.
Proc.Natl.Acad.Sci.USA, 97, 2000
1ELU
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BU of 1elu by Molmil
COMPLEX BETWEEN THE CYSTINE C-S LYASE C-DES AND ITS REACTION PRODUCT CYSTEINE PERSULFIDE.
Descriptor: 2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID, L-CYSTEINE/L-CYSTINE C-S LYASE, POTASSIUM ION, ...
Authors:Clausen, T, Kaiser, J.T, Steegborn, C, Huber, R, Kessler, D.
Deposit date:2000-03-14
Release date:2000-04-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of the cystine C-S lyase from Synechocystis: stabilization of cysteine persulfide for FeS cluster biosynthesis.
Proc.Natl.Acad.Sci.USA, 97, 2000
1CL2
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BU of 1cl2 by Molmil
CYSTATHIONINE BETA-LYASE (CBL) FROM ESCHERICHIA COLI IN COMPLEX WITH AMINOETHOXYVINYLGLYCINE
Descriptor: (2E,3E)-4-(2-aminoethoxy)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]but-3-enoic acid, CYSTATHIONINE BETA-LYASE
Authors:Clausen, T, Huber, R, Messerschmidt, A.
Deposit date:1997-09-04
Release date:1998-09-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Slow-binding inhibition of Escherichia coli cystathionine beta-lyase by L-aminoethoxyvinylglycine: a kinetic and X-ray study.
Biochemistry, 36, 1997
1CL1
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BU of 1cl1 by Molmil
CYSTATHIONINE BETA-LYASE (CBL) FROM ESCHERICHIA COLI
Descriptor: BICARBONATE ION, CYSTATHIONINE BETA-LYASE
Authors:Clausen, T, Huber, R, Messerschmidt, A.
Deposit date:1997-09-02
Release date:1998-09-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of the pyridoxal-5'-phosphate dependent cystathionine beta-lyase from Escherichia coli at 1.83 A.
J.Mol.Biol., 262, 1996
1CS1
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BU of 1cs1 by Molmil
CYSTATHIONINE GAMMA-SYNTHASE (CGS) FROM ESCHERICHIA COLI
Descriptor: 2,4-DIOXO-PENTANEDIOIC ACID, PROTEIN (CYSTATHIONINE GAMMA-SYNTHASE)
Authors:Clausen, T, Messerschmidt, A.
Deposit date:1998-09-23
Release date:1999-09-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Escherichia coli cystathionine gamma-synthase at 1.5 A resolution.
EMBO J., 17, 1998
5GL6
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BU of 5gl6 by Molmil
Msmeg rimP
Descriptor: Ribosome maturation factor RimP
Authors:Chu, T, Lau, T.C.K.
Deposit date:2016-07-08
Release date:2017-07-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The ribosomal maturation factor P fromMycobacterium smegmatisfacilitates the ribosomal biogenesis by binding to the small ribosomal protein S12.
J. Biol. Chem., 294, 2019
6ZK7
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BU of 6zk7 by Molmil
Crystal Structure of human PYROXD1/FAD complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1
Authors:Meinhart, A, Asanovic, I, Martinez, J, Clausen, T.
Deposit date:2020-06-30
Release date:2021-05-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The oxidoreductase PYROXD1 uses NAD(P) + as an antioxidant to sustain tRNA ligase activity in pre-tRNA splicing and unfolded protein response.
Mol.Cell, 81, 2021
1HO4
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BU of 1ho4 by Molmil
CRYSTAL STRUCTURE OF PYRIDOXINE 5'-PHOSPHATE SYNTHASE IN COMPLEX WITH PYRIDOXINE 5'-PHOSPHATE AND INORGANIC PHOSPHATE
Descriptor: PHOSPHATE ION, PYRIDOXINE 5'-PHOSPHATE SYNTHASE, PYRIDOXINE-5'-PHOSPHATE
Authors:Garrido-Franco, M, Laber, B, Huber, R, Clausen, T.
Deposit date:2000-12-08
Release date:2001-03-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the function of pyridoxine 5'-phosphate synthase.
Structure, 9, 2001
1HO1
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BU of 1ho1 by Molmil
CRYSTAL STRUCTURE OF PYRIDOXINE 5'-PHOSPHATE SYNTHASE
Descriptor: PYRIDOXINE 5'-PHOSPHATE SYNTHASE
Authors:Garrido-Franco, M, Laber, B, Huber, R, Clausen, T.
Deposit date:2000-12-08
Release date:2001-03-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the function of pyridoxine 5'-phosphate synthase.
Structure, 9, 2001
6OWG
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BU of 6owg by Molmil
Structure of a synthetic beta-carboxysome shell, T=4
Descriptor: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml, Microcompartments protein
Authors:Sutter, M, Laughlin, T.G, Davies, K.M, Kerfeld, C.A.
Deposit date:2019-05-09
Release date:2019-09-25
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structure of a Syntheticbeta-Carboxysome Shell.
Plant Physiol., 181, 2019
4TRQ
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BU of 4trq by Molmil
Crystal structure of Sac3/Thp1/Sem1
Descriptor: 26S proteasome complex subunit SEM1, Nuclear mRNA export protein SAC3, Nuclear mRNA export protein THP1, ...
Authors:Hellerschmied, D, Schneider, S, Kohler, A, Clausen, T.
Deposit date:2014-06-17
Release date:2015-08-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The Nuclear Pore-Associated TREX-2 Complex Employs Mediator to Regulate Gene Expression.
Cell, 162, 2015
7BII
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BU of 7bii by Molmil
Crystal structure of Nematocida HUWE1
Descriptor: E3 ubiquitin-protein ligase HUWE1
Authors:Grabarczyk, D.B, Petrova, O.A, Meinhart, A, Kessler, D, Clausen, T.
Deposit date:2021-01-12
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.037 Å)
Cite:HUWE1 employs a giant substrate-binding ring to feed and regulate its HECT E3 domain.
Nat.Chem.Biol., 17, 2021
3NWU
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BU of 3nwu by Molmil
Substrate induced remodeling of the active site regulates HtrA1 activity
Descriptor: SULFATE ION, Serine protease HTRA1
Authors:Truebestein, L, Tennstaedt, A, Hauske, P, Krojer, T, Kaiser, M, Clausen, T, Ehrmann, M.
Deposit date:2010-07-11
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Substrate-induced remodeling of the active site regulates human HTRA1 activity.
Nat.Struct.Mol.Biol., 18, 2011
3MH4
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BU of 3mh4 by Molmil
HtrA proteases are activated by a conserved mechanism that can be triggered by distinct molecular cues
Descriptor: Protease do
Authors:Krojer, T, Sawa, J, Huber, R, Clausen, T.
Deposit date:2010-04-07
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:HtrA proteases have a conserved activation mechanism that can be triggered by distinct molecular cues
Nat.Struct.Mol.Biol., 17, 2010
3MH5
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BU of 3mh5 by Molmil
HtrA proteases are activated by a conserved mechanism that can be triggered by distinct molecular cues
Descriptor: DIISOPROPYL PHOSPHONATE, Protease do
Authors:Krojer, T, Sawa, J, Huber, R, Clausen, T.
Deposit date:2010-04-07
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:HtrA proteases have a conserved activation mechanism that can be triggered by distinct molecular cues
Nat.Struct.Mol.Biol., 17, 2010
6OWF
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BU of 6owf by Molmil
Structure of a synthetic beta-carboxysome shell, T=3
Descriptor: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml, Microcompartments protein
Authors:Sutter, M, Laughlin, T.G, Davies, K.M, Kerfeld, C.A.
Deposit date:2019-05-09
Release date:2019-09-25
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of a Syntheticbeta-Carboxysome Shell.
Plant Physiol., 181, 2019
3MH7
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BU of 3mh7 by Molmil
HtrA proteases are activated by a conserved mechanism that can be triggered by distinct molecular cues
Descriptor: 5-mer peptide, Protease do
Authors:Krojer, T, Sawa, J, Huber, R, Clausen, T.
Deposit date:2010-04-07
Release date:2010-06-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.961 Å)
Cite:HtrA proteases have a conserved activation mechanism that can be triggered by distinct molecular cues
Nat.Struct.Mol.Biol., 17, 2010
3MH6
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BU of 3mh6 by Molmil
HtrA proteases are activated by a conserved mechanism that can be triggered by distinct molecular cues
Descriptor: DIISOPROPYL PHOSPHONATE, Protease do
Authors:Krojer, T, Sawa, J, Huber, R, Clausen, T.
Deposit date:2010-04-07
Release date:2010-06-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:HtrA proteases have a conserved activation mechanism that can be triggered by distinct molecular cues
Nat.Struct.Mol.Biol., 17, 2010
3FXU
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BU of 3fxu by Molmil
Crystal structure of TsaR in complex with its effector p-toluenesulfonate
Descriptor: CHLORIDE ION, FORMIC ACID, GLYCEROL, ...
Authors:Monferrer, D, Tralau, T, Kertesz, M.A, Kikhney, A, Svergun, D, Uson, I.
Deposit date:2009-01-21
Release date:2010-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural studies on the full-length LysR-type regulator TsaR from Comamonas testosteroni T-2 reveal a novel open conformation of the tetrameric LTTR fold
Mol.Microbiol., 75, 2010
3FZJ
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BU of 3fzj by Molmil
TsaR low resolution crystal structure, tetragonal form
Descriptor: LysR type regulator of tsaMBCD
Authors:Monferrer, D, Tralau, T, Kertesz, M.A, Dix, I, Kikhney, A.G, Svergun, D.I, Uson, I.
Deposit date:2009-01-26
Release date:2010-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (7.1 Å)
Cite:Structural studies on the full-length LysR-type regulator TsaR from Comamonas testosteroni T-2 reveal a novel open conformation of the tetrameric LTTR fold
Mol.Microbiol., 75, 2010
7OIK
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BU of 7oik by Molmil
Mouse RNF213:UBE2L3 transthiolation intermediate, chemically stabilized
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, E3 ubiquitin-protein ligase RNF213, MAGNESIUM ION, ...
Authors:Grabarczyk, D, Ahel, J, Clausen, T.
Deposit date:2021-05-11
Release date:2022-06-01
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:E3 ubiquitin ligase RNF213 employs a non-canonical zinc finger active site and is allosterically regulated by ATP
To Be Published
7OIM
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BU of 7oim by Molmil
Mouse RNF213, with mixed nucleotides bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, E3 ubiquitin-protein ligase RNF213, ...
Authors:Grabarczyk, D, Ahel, J, Clausen, T.
Deposit date:2021-05-11
Release date:2022-06-01
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4 Å)
Cite:E3 ubiquitin ligase RNF213 employs a non-canonical zinc finger active site and is allosterically regulated by ATP
To Be Published

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