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PDB: 309 results

2VPM
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BU of 2vpm by Molmil
Trypanothione synthetase
Descriptor: BROMIDE ION, CHLORIDE ION, TRYPANOTHIONE SYNTHETASE
Authors:Fyfe, P.K, Oza, S.L, Fairlamb, A.H, Hunter, W.N.
Deposit date:2008-03-03
Release date:2008-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Leishmania Trypanothione Synthetase-Amidase Structure Reveals a Basis for Regulation of Conflicting Synthetic and Hydrolytic Activities.
J.Biol.Chem., 283, 2008
3HGW
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BU of 3hgw by Molmil
Apo Structure of Pseudomonas aeruginosa Isochorismate-Pyruvate Lyase I87T mutant
Descriptor: CALCIUM ION, Salicylate biosynthesis protein pchB
Authors:Luo, Q, Lamb, A.L.
Deposit date:2009-05-14
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure-function analyses of isochorismate-pyruvate lyase from Pseudomonas aeruginosa suggest differing catalytic mechanisms for the two pericyclic reactions of this bifunctional enzyme
Biochemistry, 48, 2009
3HGX
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BU of 3hgx by Molmil
Crystal Structure of Pseudomonas aeruginosa Isochorismate-Pyruvate Lyase K42A mutant in complex with salicylate and pyruvate
Descriptor: 2-HYDROXYBENZOIC ACID, PYRUVIC ACID, Salicylate biosynthesis protein pchB
Authors:Luo, Q, Lamb, A.L.
Deposit date:2009-05-14
Release date:2009-06-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-function analyses of isochorismate-pyruvate lyase from Pseudomonas aeruginosa suggest differing catalytic mechanisms for the two pericyclic reactions of this bifunctional enzyme.
Biochemistry, 48, 2009
3HHP
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BU of 3hhp by Molmil
Malate dehydrogenase open conformation
Descriptor: Malate dehydrogenase
Authors:Zaitseva, J, Meneely, K.M, Lamb, A.L.
Deposit date:2009-05-15
Release date:2009-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of Escherichia coli malate dehydrogenase at 1.45 A resolution.
Acta Crystallogr.,Sect.F, 65, 2009
3SQW
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BU of 3sqw by Molmil
Structure of Mss116p (NTE deletion) bound to ssRNA and AMP-PNP
Descriptor: ATP-dependent RNA helicase MSS116, mitochondrial, MAGNESIUM ION, ...
Authors:Del Campo, M, Lambowitz, A.M.
Deposit date:2011-07-06
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.909 Å)
Cite:High-Throughput Genetic Identification of Functionally Important Regions of the Yeast DEAD-Box Protein Mss116p.
J.Mol.Biol., 413, 2011
3REM
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BU of 3rem by Molmil
Structure of the Isochorismate-Pyruvate Lyase from Pseudomonas aerugionsa with Bound Salicylate and Pyruvate
Descriptor: 2-HYDROXYBENZOIC ACID, PYRUVIC ACID, Salicylate biosynthesis protein pchB
Authors:Olucha, J, Ouellette, A.N, Luo, Q, Lamb, A.L.
Deposit date:2011-04-04
Release date:2011-07-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:pH Dependence of Catalysis by Pseudomonas aeruginosa Isochorismate-Pyruvate Lyase: Implications for Transition State Stabilization and the Role of Lysine 42.
Biochemistry, 50, 2011
3E83
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BU of 3e83 by Molmil
Crystal Structure of the the open NaK channel pore
Descriptor: CESIUM ION, Potassium channel protein, SODIUM ION
Authors:Jiang, Y, Alam, A.
Deposit date:2008-08-19
Release date:2008-12-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of ion selectivity in the NaK channel
Nat.Struct.Mol.Biol., 16, 2009
3RA7
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BU of 3ra7 by Molmil
Bispecific digoxigenin binding antibodies for targeted payload delivery
Descriptor: DIGOXIGENIN, Fab fragment, heavy chain, ...
Authors:Hopfner, K.P, Lammens, A.
Deposit date:2011-03-27
Release date:2011-07-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:Bispecific digoxigenin-binding antibodies for targeted payload delivery
Proc.Natl.Acad.Sci.USA, 108, 2011
3RET
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BU of 3ret by Molmil
Salicylate and Pyruvate Bound Structure of the Isochorismate-Pyruvate Lyase K42E Mutant from Pseudomonas aerugionsa
Descriptor: 2-HYDROXYBENZOIC ACID, PYRUVIC ACID, Salicylate biosynthesis protein pchB
Authors:Olucha, J, Ouellette, A.N, Luo, Q, Lamb, A.L.
Deposit date:2011-04-05
Release date:2011-07-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:pH Dependence of Catalysis by Pseudomonas aeruginosa Isochorismate-Pyruvate Lyase: Implications for Transition State Stabilization and the Role of Lysine 42.
Biochemistry, 50, 2011
3SQX
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BU of 3sqx by Molmil
Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP
Descriptor: ATP-dependent RNA helicase MSS116, mitochondrial, MAGNESIUM ION, ...
Authors:Del Campo, M, Lambowitz, A.M.
Deposit date:2011-07-06
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.112 Å)
Cite:High-Throughput Genetic Identification of Functionally Important Regions of the Yeast DEAD-Box Protein Mss116p.
J.Mol.Biol., 413, 2011
6AR5
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BU of 6ar5 by Molmil
Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications (Duplex Only)
Descriptor: DNA, RNA
Authors:Stamos, J.L, Lentzsch, A.M, Lambowitz, A.M.
Deposit date:2017-08-21
Release date:2017-11-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.413 Å)
Cite:Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications.
Mol. Cell, 68, 2017
2ZD2
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BU of 2zd2 by Molmil
D202K mutant of P. denitrificans Atp12p
Descriptor: ATP12 ATPase
Authors:Gatti, D.L, Ludlam, A, Brunzelle, J, Ackerman, S.H.
Deposit date:2007-11-19
Release date:2008-03-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Chaperones of F1-ATPase
J.Biol.Chem., 284, 2009
6AZW
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BU of 6azw by Molmil
IDO1/FXB-001116 crystal structure
Descriptor: (2R)-N-(4-cyanophenyl)-2-[cis-4-(quinolin-4-yl)cyclohexyl]propanamide, Indoleamine 2,3-dioxygenase 1
Authors:Lewis, H.A, Lammens, A, Steinbacher, S.
Deposit date:2017-09-13
Release date:2018-03-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Immune-modulating enzyme indoleamine 2,3-dioxygenase is effectively inhibited by targeting its apo-form.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CUL
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BU of 6cul by Molmil
PvdF of pyoverdin biosynthesis is a structurally unique N10-formyltetrahydrofolate-dependent formyltransferase
Descriptor: CITRIC ACID, N-(4-{[(2-amino-4-oxo-1,4-dihydroquinazolin-6-yl)methyl]amino}benzene-1-carbonyl)-D-glutamic acid, Pyoverdine synthetase F
Authors:Kenjic, N, Hoag, M.R, Moraski, G.C, Caperelli, C.A, Moran, G.R, Lamb, A.L.
Deposit date:2018-03-26
Release date:2019-02-06
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:PvdF of pyoverdin biosynthesis is a structurally unique N10-formyltetrahydrofolate-dependent formyltransferase.
Arch. Biochem. Biophys., 664, 2019
8PJA
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BU of 8pja by Molmil
FKBP51FK1 F67E/K58 (i, i+9) in complex with SAFit1
Descriptor: 2-[3-[(1~{R})-1-[(2~{S})-1-[(2~{S})-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidin-2-yl]carbonyloxy-3-(3,4-dimethoxyphenyl)propyl]phenoxy]ethanoic acid, Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:Meyners, C, Charalampidou, A, Hausch, F.
Deposit date:2023-06-23
Release date:2024-03-06
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Automated Flow Peptide Synthesis Enables Engineering of Proteins with Stabilized Transient Binding Pockets.
Acs Cent.Sci., 10, 2024
6AR3
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BU of 6ar3 by Molmil
Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications (RT/Duplex (Se-Met))
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA, GsI-IIC RT, ...
Authors:Stamos, J.L, Lentzsch, A.M, Lambowitz, A.M.
Deposit date:2017-08-21
Release date:2017-11-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications.
Mol. Cell, 68, 2017
8PJ8
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BU of 8pj8 by Molmil
FKBP51FK1 F67E/K60Orn (i, i+7) in complex with SAFit1
Descriptor: 2-[3-[(1~{R})-1-[(2~{S})-1-[(2~{S})-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidin-2-yl]carbonyloxy-3-(3,4-dimethoxyphenyl)propyl]phenoxy]ethanoic acid, Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:Meyners, C, Charalampidou, A, Hausch, F.
Deposit date:2023-06-23
Release date:2024-03-06
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Automated Flow Peptide Synthesis Enables Engineering of Proteins with Stabilized Transient Binding Pockets.
Acs Cent.Sci., 10, 2024
6AR1
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BU of 6ar1 by Molmil
Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications (RT/Duplex (Nat))
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA, GsI-IIC RT, ...
Authors:Stamos, J.L, Lentzsch, A.M, Lambowitz, A.M.
Deposit date:2017-08-21
Release date:2017-11-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications.
Mol. Cell, 68, 2017
6C4R
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BU of 6c4r by Molmil
Staphylopine dehydrogenase (SaODH) - Apo
Descriptor: GLYCEROL, SULFATE ION, Staphylopine dehydrogenase
Authors:McFarlane, J.S, Davis, C.L, Lamb, A.L.
Deposit date:2018-01-12
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.288 Å)
Cite:Staphylopine, pseudopaline, and yersinopine dehydrogenases: A structural and kinetic analysis of a new functional class of opine dehydrogenase.
J. Biol. Chem., 293, 2018
6C4N
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BU of 6c4n by Molmil
Pseudopaline dehydrogenase (PaODH) - NADP+ bound
Descriptor: 1,2-ETHANEDIOL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Pseudopaline dehydrogenase
Authors:McFarlane, J.S, Davis, C.L, Lamb, A.L.
Deposit date:2018-01-12
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Staphylopine, pseudopaline, and yersinopine dehydrogenases: A structural and kinetic analysis of a new functional class of opine dehydrogenase.
J. Biol. Chem., 293, 2018
6DQO
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BU of 6dqo by Molmil
Crystal structure of SsuE FMN reductase Y118A mutant in FMN bound form.
Descriptor: FLAVIN MONONUCLEOTIDE, FMN reductase (NADPH), GLYCEROL
Authors:McFarlane, J.S, Ellis, H.R, Lamb, A.L.
Deposit date:2018-06-11
Release date:2019-01-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.705 Å)
Cite:Not as easy as pi : An insertional residue does not explain the pi-helix gain-of-function in two-component FMN reductases.
Protein Sci., 28, 2019
6C4T
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BU of 6c4t by Molmil
Staphylopine dehydrogenase (SaODH) - NADP+ bound
Descriptor: GLYCEROL, Staphylopine dehydrogenase, [(2R,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3-HYDROXY-4-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4S)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE
Authors:McFarlane, J.S, Davis, C.L, Lamb, A.L.
Deposit date:2018-01-12
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Staphylopine, pseudopaline, and yersinopine dehydrogenases: A structural and kinetic analysis of a new functional class of opine dehydrogenase.
J. Biol. Chem., 293, 2018
6C4M
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BU of 6c4m by Molmil
Yersinopine dehydrogenase (YpODH) - NADP+ bound
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Yersinopine dehydrogenase
Authors:McFarlane, J.S, Davis, C.L, Lamb, A.L.
Deposit date:2018-01-12
Release date:2018-04-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Staphylopine, pseudopaline, and yersinopine dehydrogenases: A structural and kinetic analysis of a new functional class of opine dehydrogenase.
J. Biol. Chem., 293, 2018
6C4L
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BU of 6c4l by Molmil
Yersinopine dehydrogenase (YpODH) - Apo
Descriptor: Yersinopine dehydrogenase
Authors:McFarlane, J.S, Davis, C.L, Lamb, A.L.
Deposit date:2018-01-12
Release date:2018-04-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Staphylopine, pseudopaline, and yersinopine dehydrogenases: A structural and kinetic analysis of a new functional class of opine dehydrogenase.
J. Biol. Chem., 293, 2018
1IIG
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BU of 1iig by Molmil
STRUCTURE OF TRYPANOSOMA BRUCEI BRUCEI TRIOSEPHOSPHATE ISOMERASE COMPLEXED WITH 3-PHOSPHONOPROPIONATE
Descriptor: 3-PHOSPHONOPROPANOIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Noble, M.E, Wierenga, R.K, Lambeir, A.M, Opperdoes, F.R, Thunnissen, A.M, Kalk, K.H, Groendijk, H, Hol, W.G.J.
Deposit date:2001-04-23
Release date:2001-05-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The adaptability of the active site of trypanosomal triosephosphate isomerase as observed in the crystal structures of three different complexes.
Proteins, 10, 1991

222624

數據於2024-07-17公開中

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