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PDB: 32 results

8VDW
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BU of 8vdw by Molmil
X-Ray Crystal Structure of the biotin synthase from V. parvula
Descriptor: 6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACID, Biotin synthase, Fe4 H S5, ...
Authors:Lachowicz, J.C, Grove, T.L.
Deposit date:2023-12-18
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.807 Å)
Cite:Discovery of a Biotin Synthase That Utilizes an Auxiliary 4Fe-5S Cluster for Sulfur Insertion.
J.Am.Chem.Soc., 146, 2024
8VCW
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BU of 8vcw by Molmil
X-Ray Crystal Structure of the biotin synthase from B. obeum
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACID, Biotin synthase, ...
Authors:Lachowicz, J.C, Grove, T.L.
Deposit date:2023-12-14
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Discovery of a Biotin Synthase That Utilizes an Auxiliary 4Fe-5S Cluster for Sulfur Insertion.
J.Am.Chem.Soc., 146, 2024
9DFU
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BU of 9dfu by Molmil
X-ray crystal structure of the second Viperin-like enzyme from T. virens variant F40H with bound CTP and SAM
Descriptor: CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, IRON/SULFUR CLUSTER, ...
Authors:Lachowicz, J.C, Bonanno, J.B, Grove, T.L.
Deposit date:2024-08-30
Release date:2025-02-19
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights from Active Site Variants and B-8 Loop Interactions in Viperin-like Enzymes
To Be Published
9DFW
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BU of 9dfw by Molmil
X-ray crystal structure of an engineered Viperin-like enzyme from T. virens with bound CTP and SAM
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CYTIDINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Lachowicz, J.C, Bonanno, J.B, Grove, T.L.
Deposit date:2024-08-30
Release date:2025-02-12
Method:X-RAY DIFFRACTION (1.677 Å)
Cite:Structural Insights from Active Site Variants and B-8 Loop Interactions in Viperin-like Enzymes
To Be Published
9DFN
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BU of 9dfn by Molmil
X-ray crystal structure of the second viperin-like enzyme from Trichoderma virens with bound CTP and SAM
Descriptor: CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, IRON/SULFUR CLUSTER, ...
Authors:Lachowicz, J.C, Grove, T.G, Bonanno, J.B.
Deposit date:2024-08-30
Release date:2025-02-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Insights from Active Site Variants and B-8 Loop Interactions in Viperin-like Enzymes
To Be Published
9DGW
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BU of 9dgw by Molmil
X-ray crystal structure of the Viperin-like enzyme from T. virens with bound CTP and SAM
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, IRON/SULFUR CLUSTER, Radical SAM core domain-containing protein, ...
Authors:Lachowicz, J.C, Bonanno, J.B, Grove, T.L.
Deposit date:2024-09-03
Release date:2025-02-12
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural Insights from Active Site Variants and B-8 Loop Interactions in Viperin-like Enzymes
To Be Published
6CCJ
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BU of 6ccj by Molmil
NMR structure of the Rous sarcoma virus matrix protein (M domain)
Descriptor: virus matrix protein
Authors:Vlach, J, Saad, J.
Deposit date:2018-02-07
Release date:2018-10-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for targeting avian sarcoma virus Gag polyprotein to the plasma membrane for virus assembly.
J. Biol. Chem., 293, 2018
6CE5
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BU of 6ce5 by Molmil
NMR structure of the Rous sarcoma virus matrix protein (M-domain) in the presence of myo-inositol hexakisphosphate
Descriptor: virus matrix protein (M-domain)
Authors:Vlach, J, Saad, J.S.
Deposit date:2018-02-11
Release date:2018-11-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for targeting avian sarcoma virus Gag polyprotein to the plasma membrane for virus assembly.
J. Biol. Chem., 293, 2018
6CUS
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BU of 6cus by Molmil
HADDOCK structure of the Rous sarcoma virus matrix protein (M-domain) in complex with myo-inositol hexakisphosphate
Descriptor: INOSITOL HEXAKISPHOSPHATE, Matrix protein p19
Authors:Vlach, J, Saad, J.S.
Deposit date:2018-03-26
Release date:2018-10-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for targeting avian sarcoma virus Gag polyprotein to the plasma membrane for virus assembly.
J. Biol. Chem., 293, 2018
6CW4
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BU of 6cw4 by Molmil
HADDOCK structure of the Rous sarcoma virus matrix protein (M-domain) in complex with inositol 1,3,5-trisphosphate
Descriptor: (1R,2S,3r,4R,5S,6s)-2,4,6-trihydroxycyclohexane-1,3,5-triyl tris[dihydrogen (phosphate)], Matrix protein p19
Authors:Vlach, J, Saad, J.S.
Deposit date:2018-03-29
Release date:2018-10-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for targeting avian sarcoma virus Gag polyprotein to the plasma membrane for virus assembly.
J. Biol. Chem., 293, 2018
6CV8
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BU of 6cv8 by Molmil
HADDOCK structure of the Rous sarcoma virus matrix protein (M-domain) in complex with inositol 1,4,5-trisphosphate
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Matrix protein p19
Authors:Vlach, J, Saad, J.S.
Deposit date:2018-03-27
Release date:2018-10-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for targeting avian sarcoma virus Gag polyprotein to the plasma membrane for virus assembly.
J. Biol. Chem., 293, 2018
2F77
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BU of 2f77 by Molmil
Solution structure of the R55F mutant of M-PMV matrix protein (p10)
Descriptor: Core protein p10
Authors:Vlach, J, Lipov, J, Veverka, V, Lang, J, Srb, P, Rumlova, M, Hunter, E, Ruml, T, Hrabal, R.
Deposit date:2005-11-30
Release date:2006-12-05
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:D-retrovirus morphogenetic switch driven by the targeting signal accessibility to Tctex-1 of dynein.
Proc.Natl.Acad.Sci.USA, 105, 2008
2F76
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BU of 2f76 by Molmil
Solution structure of the M-PMV wild type matrix protein (p10)
Descriptor: Core protein p10
Authors:Vlach, J, Lipov, J, Veverka, V, Lang, J, Srb, P, Rumlova, M, Hunter, E, Ruml, T, Hrabal, R.
Deposit date:2005-11-30
Release date:2006-12-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:D-retrovirus morphogenetic switch driven by the targeting signal accessibility to Tctex-1 of dynein.
Proc.Natl.Acad.Sci.USA, 105, 2008
2LYA
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BU of 2lya by Molmil
Structure of HIV-1 myr(-) matrix protein in complex with 1,2-dioctanoyl-sn-phosphatidylcholine
Descriptor: 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Matrix protein p17
Authors:Vlach, J, Saad, J.
Deposit date:2012-09-14
Release date:2013-02-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Trio engagement via plasma membrane phospholipids and the myristoyl moiety governs HIV-1 matrix binding to bilayers.
Proc.Natl.Acad.Sci.USA, 110, 2013
2MGU
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BU of 2mgu by Molmil
Structure of the complex between calmodulin and the binding domain of HIV-1 matrix protein
Descriptor: CALCIUM ION, Calmodulin, MA8-43
Authors:Vlach, J, Samal, A, Saad, J.
Deposit date:2013-11-07
Release date:2014-02-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of Calmodulin Bound to the Binding Domain of the HIV-1 Matrix Protein.
J.Biol.Chem., 289, 2014
2LYB
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BU of 2lyb by Molmil
Structure of HIV-1 myr(-) matrix protein in complex with 1,2-dioctanoyl-sn-phosphatidyl-L-serine
Descriptor: Matrix protein p17, O-[(R)-{[(2R)-2,3-bis(octanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
Authors:Vlach, J, Saad, J.
Deposit date:2012-09-14
Release date:2013-02-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Trio engagement via plasma membrane phospholipids and the myristoyl moiety governs HIV-1 matrix binding to bilayers.
Proc.Natl.Acad.Sci.USA, 110, 2013
4NCW
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BU of 4ncw by Molmil
foldon domain wild type C-conjugate
Descriptor: Fibritin, N,N',N''-triethylbenzene-1,3,5-tricarboxamide
Authors:Graewert, M.A, Berthelmann, A, Lach, J, Groll, M, Eichler, J.
Deposit date:2013-10-25
Release date:2014-03-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Versatile C(3)-symmetric scaffolds and their use for covalent stabilization of the foldon trimer.
Org.Biomol.Chem., 12, 2014
4NCV
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BU of 4ncv by Molmil
Foldon domain wild type N-conjugate
Descriptor: Fibritin
Authors:Graewert, M.A, Berthelmann, A, Lach, J, Groll, M, Eichler, J.
Deposit date:2013-10-25
Release date:2014-03-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Versatile C(3)-symmetric scaffolds and their use for covalent stabilization of the foldon trimer.
Org.Biomol.Chem., 12, 2014
3TTI
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BU of 3tti by Molmil
Crystal Structure of JNK3 complexed with CC-930, an orally active anti-fibrotic JNK inhibitor
Descriptor: GLYCEROL, Mitogen-activated protein kinase 10, trans-4-({9-[(3S)-tetrahydrofuran-3-yl]-8-[(2,4,6-trifluorophenyl)amino]-9H-purin-2-yl}amino)cyclohexanol
Authors:Plantevin-Krenitsky, V, Nadolny, L, Delgado, M, Ayala, L, Clareen, S, Hilgraf, R, Albers, R, Hegde, S, D'Sidocky, N, Sapienza, J, Wright, J, McCarrick, M, Bahmanyar, S, Chamberlain, P, Delker, S.L, Muir, J, Giegel, D, Xu, L, Celeridad, M, Lachowitzer, J, Bennett, B, Moghaddam, M, Khatsenko, O, Katz, J, Fan, R, Bai, A, Tang, Y, Shirley, M.A, Benish, B, Bodine, T, Blease, K, Raymon, H, Cathers, B.E, Satoh, Y.
Deposit date:2011-09-14
Release date:2012-02-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of CC-930, an orally active anti-fibrotic JNK inhibitor.
Bioorg.Med.Chem.Lett., 22, 2012
7N7I
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BU of 7n7i by Molmil
X-ray crystal structure of Viperin-like enzyme from Trichoderma virens
Descriptor: IRON/SULFUR CLUSTER, S-ADENOSYLMETHIONINE, URIDINE 5'-TRIPHOSPHATE, ...
Authors:Grove, T.L, Almo, S.C, Bonanno, J.B, Lachowicz, J.C, Gizzi, A.G.
Deposit date:2021-06-10
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Structural Insight into the Substrate Scope of Viperin and Viperin-like Enzymes from Three Domains of Life.
Biochemistry, 60, 2021
8VPO
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BU of 8vpo by Molmil
X-Ray Crystal Structure of TigE from Paramaledivibacter caminithermalis
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Radical SAM core domain-containing protein
Authors:Grove, T.L, Lachowicz, J.C, Zizola, C.
Deposit date:2024-01-16
Release date:2024-02-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural, Biochemical, and Bioinformatic Basis for Identifying Radical SAM Cyclopropyl Synthases.
Acs Chem.Biol., 19, 2024
8DKU
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BU of 8dku by Molmil
CryoEM structure of the A. aeolicus WzmWzt transporter bound to the native O antigen
Descriptor: 6-deoxy-3-O-methyl-alpha-D-mannopyranose-(1-3)-beta-D-rhamnopyranose-(1-2)-alpha-D-rhamnopyranose, ABC transporter, Transport permease protein
Authors:Spellmon, N, Muszynski, A, Vlach, J, Zimmer, J.
Deposit date:2022-07-06
Release date:2022-09-21
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular basis for polysaccharide recognition and modulated ATP hydrolysis by the O antigen ABC transporter.
Nat Commun, 13, 2022
8DNC
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BU of 8dnc by Molmil
CryoEM structure of the A. aeolicus WzmWzt transporter bound to the native O antigen and ADP
Descriptor: 6-deoxy-3-O-methyl-alpha-D-mannopyranose-(1-3)-beta-D-rhamnopyranose-(1-2)-alpha-D-rhamnopyranose, ABC transporter, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Spellmon, N, Muszynski, A, Vlach, J, Zimmer, J.
Deposit date:2022-07-11
Release date:2022-09-21
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular basis for polysaccharide recognition and modulated ATP hydrolysis by the O antigen ABC transporter.
Nat Commun, 13, 2022
7N7H
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BU of 7n7h by Molmil
X-ray crystal structure of Viperin-like enzyme from Nematostella vectensis
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, IRON/SULFUR CLUSTER, S-ADENOSYLMETHIONINE, ...
Authors:Grove, T.L, Almo, S.C, Bonanno, J.B, Lachowicz, J.C, Gizzi, A.G.
Deposit date:2021-06-10
Release date:2021-07-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural Insight into the Substrate Scope of Viperin and Viperin-like Enzymes from Three Domains of Life.
Biochemistry, 60, 2021
2XMY
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BU of 2xmy by Molmil
Discovery and Characterisation of 2-Anilino-4-(thiazol-5-yl) pyrimidine Transcriptional CDK Inhibitors as Anticancer Agents
Descriptor: 4-[4-(3,4-DIMETHYL-2-OXO-2,3-DIHYDRO-THIAZOL-5-YL)-PYRIMIDIN-2-YLAMINO]-N-(2-METHOXY-ETHYL)-BENZENESULFONAMIDE, CELL DIVISION PROTEIN KINASE 2
Authors:Wang, S, Griffiths, G, Midgley, C.A, Barnett, A.L, Cooper, M, Grabarek, J, Ingram, L, Jackson, W, Kontopidis, G, McClue, S.J, McInnes, C, McLachlan, J, Meades, C, Mezna, M, Stuart, I, Thomas, M.P, Zheleva, D.I, Lane, D.P, Jackson, R.C, Glover, D.M, Blake, D.G, Fischer, P.M.
Deposit date:2010-07-29
Release date:2010-11-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery and Characterisation of 2-Anilino-4-(Thiazol-5-Yl)Pyrimidine Transcriptional Cdk Inhibitors as Anticancer Agents
Chem.Biol., 17, 2010

 

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