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PDB: 985 件

2P1F
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BU of 2p1f by Molmil
Human UMP Synthase (C-terminal Domain-Orotidine 5'-Monophosphate Decarboxylase)
分子名称: GLYCEROL, SODIUM ION, SULFATE ION, ...
著者Liu, Y, Tang, H.L, Pai, E.F.
登録日2007-03-05
公開日2007-04-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Human UMP Synthase (C-terminal Domain-Orotidine 5'-Monophosphate Decarboxylase)
TO BE PUBLISHED
7KLV
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BU of 7klv by Molmil
Full-length human mitochondrial Hsp90 (TRAP1) SpyCatcher/SpyTag-SdhB heterodimer in the presence of AMP-PNP
分子名称: Heat shock protein 75 kDa, mitochondrial, SpyCatcher, ...
著者Liu, Y.X, Agard, D.A.
登録日2020-11-01
公開日2021-11-03
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM analysis of human mitochondrial Hsp90 in multiple tetrameric states
To Be Published
4GA3
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BU of 4ga3 by Molmil
Crystal Structure of Human Farnesyl Diphosphate Synthase in Complex with BPH-1260
分子名称: 1-butyl-3-(2-hydroxy-2,2-diphosphonoethyl)-1H-imidazol-3-ium, Farnesyl pyrophosphate synthase, MAGNESIUM ION, ...
著者Liu, Y.-L, Zhang, Y, Oldfield, E.
登録日2012-07-24
公開日2013-05-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Chemo-Immunotherapeutic Anti-Malarials Targeting Isoprenoid Biosynthesis.
ACS MED.CHEM.LETT., 4, 2013
7TNC
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BU of 7tnc by Molmil
M13F/G116F Pseudomonas aeruginosa azurin
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Azurin, CHLORIDE ION, ...
著者Liu, Y, Lu, Y.
登録日2022-01-20
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structural Basis for the Effects of Phenylalanine on Tuning the Reduction Potential of Type 1 Copper in Azurin.
Inorg.Chem., 62, 2023
4Z0O
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BU of 4z0o by Molmil
CW-type zinc finger of ZCWPW2 with F78D mutation
分子名称: SODIUM ION, UNKNOWN ATOM OR ION, ZINC ION, ...
著者Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-03-26
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献CW-type zinc finger of ZCWPW2 with F78D mutation
To be Published
4Z0R
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Crystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide
分子名称: 1,2-ETHANEDIOL, Histone H3.1, SULFATE ION, ...
著者Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-03-26
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide
To be Published
7VYW
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BU of 7vyw by Molmil
Crystal structure of the chromodomain of Arabidopsis LHP1 in complex with methylated histone H3K9 peptide
分子名称: Chromo domain-containing protein LHP1, SULFATE ION, methylated histone H3K9 peptide
著者Liu, Y, Zhang, M, Min, J.
登録日2021-11-15
公開日2022-02-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for the recognition of methylated histone H3 by the Arabidopsis LHP1 chromodomain.
J.Biol.Chem., 298, 2022
7VZ2
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Crystal structure of chromodomain of Arabidopsis LHP1
分子名称: Chromo domain-containing protein LHP1, UNKNOWN ATOM OR ION
著者Liu, Y, Min, J.
登録日2021-11-15
公開日2022-02-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for the recognition of methylated histone H3 by the Arabidopsis LHP1 chromodomain.
J.Biol.Chem., 298, 2022
7N8N
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BU of 7n8n by Molmil
Melbournevirus nucleosome like particle
分子名称: DNA (147-MER), Histone H2B-H2A doublet, Histone H4-H3 doublet
著者Liu, Y, Toner, C.M, Zhou, K, Bowerman, S, Luger, K.
登録日2021-06-15
公開日2021-08-04
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Virus-encoded histone doublets are essential and form nucleosome-like structures.
Cell, 184, 2021
5DWS
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BU of 5dws by Molmil
Crystal Structure of ITCH WW3 domain in complex with TXNIP peptide
分子名称: E3 ubiquitin-protein ligase Itchy homolog, UNKNOWN ATOM OR ION, txnip
著者Liu, Y, Tempel, W, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-09-22
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal Structure of ITCH WW3 domain in complex with TXNIP peptide
to be published
5DZD
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BU of 5dzd by Molmil
Crystal Structure of WW4 domain of ITCH in complex with TXNIP peptide
分子名称: E3 ubiquitin-protein ligase Itchy homolog, Thioredoxin-interacting protein, UNKNOWN ATOM OR ION
著者Liu, Y, Tempel, W, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-09-25
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal Structure of WW4 domain of ITCH in complex with TXNIP peptide
To be Published
5I5N
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BU of 5i5n by Molmil
Crystal Structure of N-terminal Domain of Matrix Protein of Thogoto Virus at Acidic pH.
分子名称: Matrix protein
著者Liu, Y, Liang, H, Yang, M.
登録日2016-02-15
公開日2016-08-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.418 Å)
主引用文献pH-dependent conformational changes of a Thogoto virus matrix protein reveal mechanisms of viral assembly and uncoating
J.Gen.Virol., 97, 2016
5I5O
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BU of 5i5o by Molmil
Crystal Structure of N-terminal Domain of Matrix Protein of Thogoto Virus at Neutral pH.
分子名称: Matrix protein
著者Liu, Y, Liang, H, Yang, M.
登録日2016-02-15
公開日2016-08-17
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (2.682 Å)
主引用文献pH-dependent conformational changes of a Thogoto virus matrix protein reveal mechanisms of viral assembly and uncoating
J.Gen.Virol., 97, 2016
5XZ3
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BU of 5xz3 by Molmil
The X-ray structure of Apis mellifera PGRP-SA
分子名称: Peptidoglycan-recognition protein, SULFATE ION
著者Liu, Y.J, Huang, J.X, Zhao, X.M, An, J.D.
登録日2017-07-11
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Crystal structure of peptidoglycan recognition protein SA in Apis mellifera (Hymenoptera: Apidae).
Protein Sci., 27, 2018
2GJ2
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BU of 2gj2 by Molmil
Crystal Structure of VP9 from White Spot Syndrome Virus
分子名称: CADMIUM ION, wsv230
著者Liu, Y, Wu, J.L, Song, J.X, Sivaraman, J, Hew, C.L.
登録日2006-03-30
公開日2006-09-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Identification of a Novel Nonstructural Protein, VP9, from White Spot Syndrome Virus: Its Structure Reveals a Ferredoxin Fold with Specific Metal Binding Sites
J.Virol., 80, 2006
2DJM
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BU of 2djm by Molmil
Solution structure of N-terminal starch-binding domain of glucoamylase from Rhizopus oryzae
分子名称: glucoamylase A
著者Liu, Y.N, Lai, Y.T, Lyu, P.C.
登録日2006-04-04
公開日2007-03-27
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of family 21 carbohydrate-binding module from Rhizopus oryzae glucoamylase
Biochem.J., 403, 2007
2OQS
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BU of 2oqs by Molmil
Structure of the hDLG/SAP97 PDZ2 in complex with HPV-18 papillomavirus E6 peptide
分子名称: C-terminal HPV-18 E6 peptide, Disks large homolog 1
著者Liu, Y, Baleja, J.D, Henry, G.D, Hegde, R.S.
登録日2007-02-01
公開日2007-09-04
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the hDlg/SAP97 PDZ2 domain and its mechanism of interaction with HPV-18 papillomavirus E6 protein.
Biochemistry, 46, 2007
3BAR
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BU of 3bar by Molmil
Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase covalently modified by 6-azido-UMP
分子名称: Orotidine 5'-phosphate decarboxylase, URIDINE-5'-MONOPHOSPHATE
著者Liu, Y, Bello, A.M, Poduch, E, Lau, W, Kotra, L.P, Pai, E.F.
登録日2007-11-08
公開日2008-01-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-Activity Relationships of C6-Uridine Derivatives Targeting Plasmodia Orotidine Monophosphate Decarboxylase.
J.Med.Chem., 51, 2008
2QAF
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BU of 2qaf by Molmil
Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase covalently modified by 6-iodo-UMP
分子名称: Orotidine 5' monophosphate decarboxylase, SULFATE ION, URIDINE-5'-MONOPHOSPHATE
著者Liu, Y, Lau, W, Bello, A.M, Kotra, L.P, Hui, R, Pai, E.F.
登録日2007-06-15
公開日2008-04-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure-activity relationships of C6-uridine derivatives targeting plasmodia orotidine monophosphate decarboxylase
J.Med.Chem., 51, 2008
3BPW
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BU of 3bpw by Molmil
Crystal Structure of P. falciparum Orotidine 5'-monophosphate Decarboxylase Complexed with XMP
分子名称: DI(HYDROXYETHYL)ETHER, Orotidine 5'-phosphate decarboxylase, PHOSPHATE ION, ...
著者Liu, Y, Lau, W, Pai, E.F.
登録日2007-12-19
公開日2008-11-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of P. falciparum Orotidine 5'-monophosphate Decarboxylase Complexed with XMP
To be Published
3BVJ
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BU of 3bvj by Molmil
Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Complexed with XMP
分子名称: GLYCEROL, SULFATE ION, Uridine 5'-monophosphate synthase, ...
著者Liu, Y, Tang, H.L, Pai, E.F.
登録日2008-01-07
公開日2008-11-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Complexed with XMP
To be Published
3Q9S
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BU of 3q9s by Molmil
Crystal structure of rra(1-215) from Deinococcus Radiodurans
分子名称: DNA-binding response regulator
著者Liu, Y, Gao, Z.Q, Dong, Y.H, Ji, C.N.
登録日2011-01-09
公開日2012-01-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of rra(1-215) from Deinococcus Radiodurans
To be Published
3BGJ
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BU of 3bgj by Molmil
Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Covalently Modified by 6-iodo-UMP
分子名称: GLYCEROL, URIDINE-5'-MONOPHOSPHATE, Uridine 5'-monophosphate synthase
著者Liu, Y, Tang, H.L, Bello, A.M, Devalla, S, Kotra, L.P, Pai, E.F.
登録日2007-11-26
公開日2008-11-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Covalently Modified by 6-iodo-UMP
To be Published
2Q8Z
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Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase complexed with 6-amino-UMP
分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 6-AMINOURIDINE 5'-MONOPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
著者Liu, Y, Lau, W, Bello, A.M, Kotra, L.P, Hui, R, Pai, E.F.
登録日2007-06-12
公開日2008-01-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-Activity Relationships of C6-Uridine Derivatives Targeting Plasmodia Orotidine Monophosphate Decarboxylase.
J.Med.Chem., 51, 2008
7KCL
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BU of 7kcl by Molmil
Full-length human mitochondrial Hsp90 (TRAP1) in complex with SdhB in the presence of AMP-PNP
分子名称: Heat shock protein 75 kDa, mitochondrial, MAGNESIUM ION, ...
著者Liu, Y.X, Agard, D.A.
登録日2020-10-06
公開日2021-10-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Cryo-EM reveals the dynamic interplay between mitochondrial Hsp90 and SdhB folding intermediates
To Be Published

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