Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 802 件

8VIW
DownloadVisualize
BU of 8viw by Molmil
Cryo-EM structure of heparosan synthase 2 from Pasteurella multocida with polysaccharide in the GlcNAc-T active site
分子名称: Heparosan synthase B, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ...
著者Krahn, J.M, Pedersen, L.C, Liu, J, Stancanelli, E, Borgnia, M, Vivarette, E.
登録日2024-01-05
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural and Functional Analysis of Heparosan Synthase 2 from Pasteurella multocida to Improve the Synthesis of Heparin
Acs Catalysis, 14, 2024
7SZZ
DownloadVisualize
BU of 7szz by Molmil
Structure of the smaller diameter PSMalpha3 nanotubes
分子名称: Phenol-soluble modulin PSM-alpha-3
著者Beltran, L.C, Kreutzberger, M.A, Wang, S, Egelman, E.H, Conticello, V.P.
登録日2021-11-29
公開日2022-05-18
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Phenol-soluble modulins PSM alpha 3 and PSM beta 2 form nanotubes that are cross-alpha amyloids.
Proc.Natl.Acad.Sci.USA, 119, 2022
7T0X
DownloadVisualize
BU of 7t0x by Molmil
Structure of the larger diameter PSMalpha3 nanotube
分子名称: Phenol-soluble modulin PSM-alpha-3
著者Kreutzberger, M.A, Wang, S, Beltran, L.C, Egelman, E.H, Conticello, V.P.
登録日2021-11-30
公開日2022-05-18
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Phenol-soluble modulins PSM alpha 3 and PSM beta 2 form nanotubes that are cross-alpha amyloids.
Proc.Natl.Acad.Sci.USA, 119, 2022
7SZI
DownloadVisualize
BU of 7szi by Molmil
Cryo-EM structure of OmpK36-TraN mating pair stabilization proteins from carbapenem-resistant Klebsiella pneumoniae
分子名称: OmpK36, TraN
著者Beltran, L.C, Seddon, C, Beis, K, Frankel, G, Egelman, E.H.
登録日2021-11-27
公開日2022-06-08
最終更新日2022-07-13
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Mating pair stabilization mediates bacterial conjugation species specificity.
Nat Microbiol, 7, 2022
5MPR
DownloadVisualize
BU of 5mpr by Molmil
Single Amino Acid Variant of Human Mitochondrial Branched Chain Amino Acid Aminotransferase 2
分子名称: 1,2-ETHANEDIOL, Branched-chain-amino-acid aminotransferase, mitochondrial, ...
著者Hakansson, M, Walse, B, Nilsson, C, Anderson, L.C.
登録日2016-12-18
公開日2017-07-19
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Intact Protein Analysis at 21 Tesla and X-Ray Crystallography Define Structural Differences in Single Amino Acid Variants of Human Mitochondrial Branched-Chain Amino Acid Aminotransferase 2 (BCAT2).
J. Am. Soc. Mass Spectrom., 28, 2017
5MNS
DownloadVisualize
BU of 5mns by Molmil
Structural and functional characterization of OleP in complex with 6DEB in sodium formate
分子名称: 6-DEOXYERYTHRONOLIDE B, Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE
著者Parisi, G, Savino, C, Montemiglio, L.C, Vallone, B.
登録日2016-12-13
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Substrate-induced conformational change in cytochrome P450 OleP.
FASEB J., 33, 2019
5MNV
DownloadVisualize
BU of 5mnv by Molmil
Structural and functional characterization of OleP in complex with 6DEB in PEG
分子名称: 6-DEOXYERYTHRONOLIDE B, Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE
著者Parisi, G, Savino, C, Montemiglio, L.C.
登録日2016-12-13
公開日2018-02-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Substrate-induced conformational change in cytochrome P450 OleP.
FASEB J., 33, 2019
5N9X
DownloadVisualize
BU of 5n9x by Molmil
Structure of adenylation domain THR1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces SP.OH-5093, ligand bound structure
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Adenylation domain, MAGNESIUM ION, ...
著者Savino, C, Vallone, B, Scaglione, A, Parisi, G, Montemiglio, L.C, Fullone, M.R, Grgurina, I.
登録日2017-02-27
公開日2017-07-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献Structure of the adenylation domain Thr1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces sp. OH-5093-protein flexibility and molecular bases of substrate specificity.
FEBS J., 284, 2017
8A58
DownloadVisualize
BU of 8a58 by Molmil
X-ray structure of TRIM21 RING E3 ligase in complex with E2 enzyme Ube2W
分子名称: E3 ubiquitin-protein ligase TRIM21, Ubiquitin-conjugating enzyme E2 W, ZINC ION
著者James, L.C, Kiss, L.
登録日2022-06-14
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Trim-Away ubiquitinates and degrades lysine-less and N-terminally acetylated substrates.
Nat Commun, 14, 2023
7OHD
DownloadVisualize
BU of 7ohd by Molmil
CRYSTAL STRUCTURE OF FERRIC MURINE NEUROGLOBIN CDLESS MUTANT
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ISOPROPYL ALCOHOL, ...
著者Exertier, C, Freda, I, Montemiglio, L.C, Savino, C, Cerutti, G, Gugole, E, Vallone, B.
登録日2021-05-10
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Probing the Role of Murine Neuroglobin CDloop-D-Helix Unit in CO Ligand Binding and Structural Dynamics.
Acs Chem.Biol., 17, 2022
6D7N
DownloadVisualize
BU of 6d7n by Molmil
Crystal structure of the W357R/W399R Importin alpha mutant
分子名称: 1,2-ETHANEDIOL, Peroxidase,Importin subunit alpha-1
著者Pedersen, L.C, London, R.E, Gabel, S.A.
登録日2018-04-25
公開日2019-03-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Variations in nuclear localization strategies among pol X family enzymes.
Traffic, 2018
7ZTH
DownloadVisualize
BU of 7zth by Molmil
Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the open conformation
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M.
登録日2022-05-10
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
7ZN5
DownloadVisualize
BU of 7zn5 by Molmil
Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the closed conformation, C2 symmetry.
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M.
登録日2022-04-20
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
7ZLA
DownloadVisualize
BU of 7zla by Molmil
Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the half-closed conformation
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Savino, C, Exertier, C, Bolognesi, M, Chaves Sanjuan, A.
登録日2022-04-14
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.99 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
7ZPA
DownloadVisualize
BU of 7zpa by Molmil
Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the closed conformation, C1 symmetry
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M.
登録日2022-04-27
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
6D7M
DownloadVisualize
BU of 6d7m by Molmil
Crystal structure of the W184R/W231R Importin alpha mutant
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Peroxidase,Importin subunit alpha-1, ...
著者Pedersen, L.C, London, R.E, Gabel, S.A.
登録日2018-04-25
公開日2019-03-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.187 Å)
主引用文献Variations in nuclear localization strategies among pol X family enzymes.
Traffic, 2018
7OVX
DownloadVisualize
BU of 7ovx by Molmil
E3 RING ligase binding domain
分子名称: E3 ubiquitin-protein ligase TRIM7, Peptide G
著者James, L.C.
登録日2021-06-15
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献E3 ligase targeting domain
To Be Published
7P49
DownloadVisualize
BU of 7p49 by Molmil
HLA-E*01:03 in complex with Mtb14
分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
著者Walters, L.C, Gillespie, G.M.
登録日2021-07-10
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Primary and secondary functions of HLA-E are determined by stability and conformation of the peptide-bound complexes.
Cell Rep, 39, 2022
7OW2
DownloadVisualize
BU of 7ow2 by Molmil
E3 RING ligase binding domain with peptide
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase RNF187 peptide, E3 ubiquitin-protein ligase TRIM7, ...
著者James, L.C.
登録日2021-06-16
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献E3 ligase targeting domain
To Be Published
7P4B
DownloadVisualize
BU of 7p4b by Molmil
HLA-E*01:03 in complex with IL9
分子名称: Beta-2-microglobulin, ESAT-6-like protein EsxH, GLYCEROL, ...
著者Walters, L.C, Gillespie, G.M.
登録日2021-07-10
公開日2022-07-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Primary and secondary functions of HLA-E are determined by stability and conformation of the peptide-bound complexes.
Cell Rep, 39, 2022
6ES8
DownloadVisualize
BU of 6es8 by Molmil
HIV capsid hexamer with IP6 ligand
分子名称: Gag protein, INOSITOL HEXAKISPHOSPHATE
著者James, L.C.
登録日2017-10-19
公開日2018-08-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献IP6 is an HIV pocket factor that prevents capsid collapse and promotes DNA synthesis.
Elife, 7, 2018
6ERM
DownloadVisualize
BU of 6erm by Molmil
HIV Hexamer with ligand
分子名称: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-TRIPHOSPHATE, Gag polyprotein
著者James, L.C.
登録日2017-10-18
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献HIV hexamer
To Be Published
6ERN
DownloadVisualize
BU of 6ern by Molmil
HIV Hexamer with ligand
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Gag polyprotein
著者James, L.C.
登録日2017-10-18
公開日2018-11-07
最終更新日2020-04-01
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献HIV hexamer
To Be Published
5D02
DownloadVisualize
BU of 5d02 by Molmil
Neisseria meningitidis 3 deoxy-D-arabino-heptulosonate 7-phosphate synthase Glu176Gln variant
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE, ...
著者Heyes, L.C.
登録日2015-08-02
公開日2016-08-10
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Neisseria meningitidis 3 deoxy-D-arabino-heptulosonate 7-phosphate synthase Glu176Gln variant at 1.87 Angstroms resolution
To Be Published
5DCB
DownloadVisualize
BU of 5dcb by Molmil
Neisseria meningitidis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase regulated and complexed with PEP
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Heyes, L.C, Parker, E.J.
登録日2015-08-23
公開日2016-08-24
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of Neisseria meningitidis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase regulated and complexed with PEP at 2.05 Angstroms
To Be Published

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon