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PDB: 145 results

5IQW
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1.95A resolution structure of Apo HasAp (R33A) from Pseudomonas aeruginosa
Descriptor: ACETATE ION, CADMIUM ION, Heme acquisition protein HasAp
Authors:Kumar, R, Lovell, S, Battaile, K.P, Yao, H, Rivera, M.
Deposit date:2016-03-11
Release date:2016-04-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Replacing Arginine 33 for Alanine in the Hemophore HasA from Pseudomonas aeruginosa Causes Closure of the H32 Loop in the Apo-Protein.
Biochemistry, 55, 2016
5IQX
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BU of 5iqx by Molmil
1.05A resolution structure of Holo HasAp (R33A) from Pseudomonas aeruginosa
Descriptor: D-MALATE, Heme acquisition protein HasAp, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kumar, R, Lovell, S, Battaile, K.P, Yao, H, Rivera, M.
Deposit date:2016-03-11
Release date:2016-04-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Replacing Arginine 33 for Alanine in the Hemophore HasA from Pseudomonas aeruginosa Causes Closure of the H32 Loop in the Apo-Protein.
Biochemistry, 55, 2016
6I75
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BU of 6i75 by Molmil
Galectin-3C in complex with substituted polyfluoroaryl monothiogalactoside derivative 2
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-4-[4-[2,3,5,6-tetrakis(fluoranyl)-4-oxidanyl-phenyl]-1,2,3-triazol-1-yl]oxane-3,5-diol, Galectin-3
Authors:Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
Deposit date:2018-11-15
Release date:2019-01-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.171 Å)
Cite:Substituted polyfluoroaryl interactions with an arginine side chain in galectin-3 are governed by steric-, desolvation and electronic conjugation effects.
Org. Biomol. Chem., 17, 2019
6I76
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BU of 6i76 by Molmil
Galectin-3C in complex with substituted polyfluoroaryl monothiogalactoside derivative-3
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-[4-azido-2,3,5,6-tetrakis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol, Galectin-3
Authors:Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
Deposit date:2018-11-15
Release date:2019-01-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Substituted polyfluoroaryl interactions with an arginine side chain in galectin-3 are governed by steric-, desolvation and electronic conjugation effects.
Org. Biomol. Chem., 17, 2019
6I74
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BU of 6i74 by Molmil
Galectin-3C in complex with substituted polyfluoroaryl monothiogalactoside derivative 1
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-4-[4-[2,3,4,5,6-pentakis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-3,5-diol, Galectin-3
Authors:Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
Deposit date:2018-11-15
Release date:2019-01-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.959 Å)
Cite:Substituted polyfluoroaryl interactions with an arginine side chain in galectin-3 are governed by steric-, desolvation and electronic conjugation effects.
Org. Biomol. Chem., 17, 2019
6I78
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BU of 6i78 by Molmil
Galectin-3C in complex with substituted polyfluoroaryl monothiogalactoside derivative 5
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-4-[4-[2,3,5,6-tetrakis(fluoranyl)-4-(methylamino)phenyl]-1,2,3-triazol-1-yl]oxane-3,5-diol, Galectin-3
Authors:Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
Deposit date:2018-11-15
Release date:2019-01-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Substituted polyfluoroaryl interactions with an arginine side chain in galectin-3 are governed by steric-, desolvation and electronic conjugation effects.
Org. Biomol. Chem., 17, 2019
6I77
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BU of 6i77 by Molmil
Galectin-3C in complex with substituted polyfluoroaryl monothiogalactoside derivative-4
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-[4-azanyl-2,3,5,6-tetrakis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol, Galectin-3
Authors:Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
Deposit date:2018-11-15
Release date:2019-01-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.219 Å)
Cite:Substituted polyfluoroaryl interactions with an arginine side chain in galectin-3 are governed by steric-, desolvation and electronic conjugation effects.
Org. Biomol. Chem., 17, 2019
7EVA
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BU of 7eva by Molmil
Structure of molecular chaperone SycE of Yersinia enterocolitica
Descriptor: YopE regulator
Authors:Kumar, R, Datta, S.
Deposit date:2021-05-21
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.083 Å)
Cite:Structure of molecular chaperone SycE of Yersinia enterocolitica
To Be Published
4JER
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BU of 4jer by Molmil
1.1A resolution Apo structure of the hemophore HasA from Yersinia pestis (Tetragonal Form)
Descriptor: Hemophore HasA, SODIUM ION
Authors:Kumar, R, Lovell, S, Battaile, K.P, Rivera, M.
Deposit date:2013-02-27
Release date:2013-04-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The Hemophore HasA from Yersinia pestis (HasAyp) Coordinates Hemin with a Single Residue, Tyr75, and with Minimal Conformational Change.
Biochemistry, 52, 2013
4JET
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BU of 4jet by Molmil
2.2A resolution structure of Holo hemophore HasA from Yersinia pestis
Descriptor: CHLORIDE ION, Hemophore HasA, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kumar, R, Lovell, S, Battaile, K.P, Rivera, M.
Deposit date:2013-02-27
Release date:2013-04-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Hemophore HasA from Yersinia pestis (HasAyp) Coordinates Hemin with a Single Residue, Tyr75, and with Minimal Conformational Change.
Biochemistry, 52, 2013
4JES
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BU of 4jes by Molmil
1.6A resolution Apo structure of the hemophore HasA from Yersinia pestis (Hexagonal Form)
Descriptor: HEXAETHYLENE GLYCOL, Hemophore HasA, MALONATE ION, ...
Authors:Kumar, R, Lovell, S, Battaile, K.P, Rivera, M.
Deposit date:2013-02-27
Release date:2013-04-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Hemophore HasA from Yersinia pestis (HasAyp) Coordinates Hemin with a Single Residue, Tyr75, and with Minimal Conformational Change.
Biochemistry, 52, 2013
2DVC
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BU of 2dvc by Molmil
Structure of the bovine lactoferrin C-lobe complex with sucrose at 3.0 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Mir, R, Prem Kumar, R, Bhardwaj, R, Ethayathulla, A.S, Sinha, M, Singh, N, Bhushan, A, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2006-07-31
Release date:2006-08-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the bovine lactoferrin C-lobe complex with sucrose at 3.0 A resolution
To be Published
8B9Q
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BU of 8b9q by Molmil
Molecular structure of Cu(II)-bound amyloid-beta monomer implicated in inhibition of peptide self-assembly in Alzheimer's disease
Descriptor: Amyloid-beta A4 protein, COPPER (II) ION
Authors:Abelein, A, Ciofi-Baffoni, S, Kumar, R, Giachetti, A, Piccioli, M, Biverstal, H.
Deposit date:2022-10-06
Release date:2023-02-08
Last modified:2024-06-05
Method:SOLUTION NMR
Cite:Molecular Structure of Cu(II)-Bound Amyloid-beta Monomer Implicated in Inhibition of Peptide Self-Assembly in Alzheimer's Disease.
Jacs Au, 2, 2022
2DWA
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BU of 2dwa by Molmil
Structure of the complex of lactoferrin C-terminal half with fucose at 2.07 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Mir, R, Prem Kumar, R, Singh, N, Sinha, M, Sharma, S, Kaur, P, Bhushan, A, Singh, T.P.
Deposit date:2006-08-09
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structure of the complex of lactoferrin C-terminal half with fucose at 2.07 A resolution
To be Published
2DWI
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BU of 2dwi by Molmil
Crystal structure of the complex formed between C-terminal half of bovine lactoferrin and cellobiose at 2.2 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Prem Kumar, R, Mir, R, Sinha, M, Singh, N, Sharma, S, Kaur, P, Bhushan, A, Singh, T.P.
Deposit date:2006-08-13
Release date:2006-09-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the complex formed between C-terminal half of bovine lactoferrin and cellobiose at 2.2 A resolution
To be Published
3KJZ
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BU of 3kjz by Molmil
Crystal structure of native peptidyl-tRNA hydrolase from Mycobacterium smegmatis
Descriptor: Peptidyl-tRNA hydrolase
Authors:Kumar, A, Singh, N, Yadav, R, Prem Kumar, R, Sharma, S, Arora, A, Singh, T.P.
Deposit date:2009-11-04
Release date:2010-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of peptidyl-tRNA hydrolase from mycobacterium smegmatis reveals novel features related to enzyme dynamics.
Int J Biochem Mol Biol, 3, 2012
1SV9
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BU of 1sv9 by Molmil
Crystal structure of the complex formed between groupII phospholipase A2 and anti-inflammatory agent 2-[(2,6-Dichlorophenyl)amino] benzeneacetic acid at 2.7A resolution
Descriptor: 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID, Phospholipase A2
Authors:Senthil kumar, R, Singh, N, Ethayathulla, A.S, Prem kumar, R, Sharma, S, Singh, T.P.
Deposit date:2004-03-29
Release date:2004-04-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal structure of the complex formed between group II phospholipase A2 and anti-inflammatory agent 2-[(2,6-Dichlorophenyl)amino] benzeneacetic acid at 2.7A resolution
To be Published
3NJU
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BU of 3nju by Molmil
Crystal structure of the complex of group I phospholipase A2 with 4-Methoxy-benzoicacid at 1.4A resolution
Descriptor: 4-METHOXYBENZOIC ACID, CALCIUM ION, Phospholipase A2 isoform 3
Authors:Kaushik, S, Prem Kumar, R, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-06-18
Release date:2010-07-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the complex of group I phospholipase A2 with 4-Methoxy-benzoicacid at 1.4A resolution
To be Published
4M2P
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BU of 4m2p by Molmil
Crystal structure of a non-myristoylated C39D recoverin mutant with one calcium ion bound to EF-hand 3
Descriptor: CALCIUM ION, Recoverin
Authors:Prem Kumar, R, Ranaghan, M.J, Oprian, D.D.
Deposit date:2013-08-05
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Highly Conserved Cysteine of Neuronal Calcium-sensing Proteins Controls Cooperative Binding of Ca2+ to Recoverin.
J.Biol.Chem., 288, 2013
2DP5
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BU of 2dp5 by Molmil
Structure of streptococcus pyogenes bacteriophage-associated hyaluronate lyase Hylp2
Descriptor: Hyaluronidase
Authors:Mishra, P, Bhakuni, V, Prem Kumar, R, Singh, N, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2006-05-06
Release date:2006-05-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Structure of streptococcus pyogenes bacteriophage-associated hyaluronate lyase Hylp2
To be Published
1SQY
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BU of 1sqy by Molmil
Structure of human diferric lactoferrin at 2.5A resolution using crystals grown at pH 6.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Vikram, P, Prem Kumar, R, Singh, N, Kumar, J, Ethayathulla, A.S, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2004-03-22
Release date:2004-04-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of human diferric lactoferrin at 2.5A resolution using crystals grown at pH 6.5.
To be Published
1SYT
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BU of 1syt by Molmil
Crystal structure of signalling protein from goat SPG-40 in the presense of N,N',N''-triacetyl-chitotriose at 2.6A resolution
Descriptor: BP40, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kumar, J, Prem Kumar, R, Srivastava, D.B, Sharma, S, Singh, T.P.
Deposit date:2004-04-02
Release date:2004-04-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of signalling protein from goat SPG-40 in the presense of N,N',N''-triacetyl-chitotriose at 2.6A resolution
to be published
6H7T
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BU of 6h7t by Molmil
Native structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Turbe-Doan, A, Record, E, Lombard, V, Kumar, R, Henrissat, B, Levasseur, A, Garron, M.L.
Deposit date:2018-07-31
Release date:2019-08-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The functional and structural characterization of Trichoderma reesei dehydrogenase belonging to the PQQ dependent family of Carbohydrate-Active Enzymes Family AA12.
Appl.Environ.Microbiol., 2019
6ONM
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BU of 6onm by Molmil
Crystal Structure of (+)-Limonene Synthase Complexed with 8,9-Difluorolinalyl Diphosphate
Descriptor: (+)-limonene synthase, (3R)-8-fluoro-7-(fluoromethyl)-3-methylocta-1,6-dien-3-yl trihydrogen diphosphate, MANGANESE (II) ION
Authors:Prem Kumar, R, Morehouse, B.R, Yu, Q, Oprian, D.D.
Deposit date:2019-04-22
Release date:2019-09-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Direct Evidence of an Enzyme-Generated LPP Intermediate in (+)-Limonene Synthase Using a Fluorinated GPP Substrate Analog.
Acs Chem.Biol., 14, 2019
6WKH
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BU of 6wkh by Molmil
Crystal structure of pentalenene synthase mutant F76W complexed with 12,13-difluorofarnesyl diphosphate
Descriptor: (2E,6E)-12-fluoro-11-(fluoromethyl)-3,7-dimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, Pentalenene synthase
Authors:Prem Kumar, R, Matos, J.O, Oprian, D.D.
Deposit date:2020-04-16
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Mechanism Underlying Anti-Markovnikov Addition in the Reaction of Pentalenene Synthase.
Biochemistry, 59, 2020

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