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PDB: 87 件
6JFZ
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BU of 6jfz by Molmil
GluK3 receptor complex with UBP310
分子名称: Glutamate receptor ionotropic, kainate 3
著者Kumari, J, Kumar, J.
登録日2019-02-13
公開日2019-07-24
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Structural and Functional Insights into GluK3-kainate Receptor Desensitization and Recovery.
Sci Rep, 9, 2019
6JMV
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Crystal structure of the GluK3 ligand binding domain complex with SYM and zinc
分子名称: 2S,4R-4-METHYLGLUTAMATE, ACETATE ION, CHLORIDE ION, ...
著者Kumari, J, Kumar, J.
登録日2019-03-13
公開日2019-07-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.832 Å)
主引用文献Structural and Functional Insights into GluK3-kainate Receptor Desensitization and Recovery.
Sci Rep, 9, 2019
1SYT
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BU of 1syt by Molmil
Crystal structure of signalling protein from goat SPG-40 in the presense of N,N',N''-triacetyl-chitotriose at 2.6A resolution
分子名称: BP40, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kumar, J, Prem Kumar, R, Srivastava, D.B, Sharma, S, Singh, T.P.
登録日2004-04-02
公開日2004-04-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of signalling protein from goat SPG-40 in the presense of N,N',N''-triacetyl-chitotriose at 2.6A resolution
to be published
5ZKA
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BU of 5zka by Molmil
Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum complexed with Pyruvate
分子名称: 1,2-ETHANEDIOL, N-acetylneuraminate lyase, TRIETHYLENE GLYCOL
著者Kumar, J.P, Rao, H, Nayak, V, Ramaswamy, S.
登録日2018-03-23
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum
Acta Crystallogr F Struct Biol Commun, 74, 2018
6JFY
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GluK3 receptor trapped in Desensitized state
分子名称: Glutamate receptor ionotropic, kainate 3
著者Kumari, J, Kumar, J.
登録日2019-02-13
公開日2019-07-24
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献Structural and Functional Insights into GluK3-kainate Receptor Desensitization and Recovery.
Sci Rep, 9, 2019
7VE6
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BU of 7ve6 by Molmil
N-terminal domain of VraR
分子名称: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Response regulator protein VraR
著者Kumar, J.V, Chen, C, Hsu, C.H.
登録日2021-09-08
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structural insights into DNA binding domain of vancomycin-resistance-associated response regulator in complex with its promoter DNA from Staphylococcus aureus.
Protein Sci., 31, 2022
7VE4
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BU of 7ve4 by Molmil
C-terminal domain of VraR
分子名称: DNA-binding response regulator
著者Kumar, J.V, Chen, C, Hsu, C.H.
登録日2021-09-08
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural insights into DNA binding domain of vancomycin-resistance-associated response regulator in complex with its promoter DNA from Staphylococcus aureus.
Protein Sci., 31, 2022
6KZM
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BU of 6kzm by Molmil
GluK3 receptor complex with kainate
分子名称: Glutamate receptor ionotropic, kainate 3
著者Kumar, J, Kumari, J, Burada, A.P.
登録日2019-09-24
公開日2020-03-04
実験手法ELECTRON MICROSCOPY (9.6 Å)
主引用文献Structural dynamics of the GluK3-kainate receptor neurotransmitter binding domains revealed by cryo-EM.
Int.J.Biol.Macromol., 149, 2020
6L6F
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BU of 6l6f by Molmil
GluK3 receptor complex with UBP301
分子名称: Glutamate receptor ionotropic, kainate 3
著者Kumar, J, Kumari, J, Burada, A.P.
登録日2019-10-28
公開日2020-03-04
実験手法ELECTRON MICROSCOPY (10.6 Å)
主引用文献Structural dynamics of the GluK3-kainate receptor neurotransmitter binding domains revealed by cryo-EM.
Int.J.Biol.Macromol., 149, 2020
7VE5
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C-terminal domain of VraR
分子名称: DNA-binding response regulator, MAGNESIUM ION, R1-DNA
著者Kumar, J.V, Chen, C, Hsu, C.H.
登録日2021-09-08
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into DNA binding domain of vancomycin-resistance-associated response regulator in complex with its promoter DNA from Staphylococcus aureus.
Protein Sci., 31, 2022
5ZJM
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BU of 5zjm by Molmil
Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum
分子名称: 1,2-ETHANEDIOL, N-acetylneuraminate lyase
著者Kumar, J.P, Rao, H, Nayak, V, Subramanian, R.
登録日2018-03-21
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.323 Å)
主引用文献Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum
Acta Crystallogr F Struct Biol Commun, 74, 2018
1N76
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CRYSTAL STRUCTURE OF HUMAN SEMINAL LACTOFERRIN AT 3.4 A RESOLUTION
分子名称: CARBONATE ION, FE (III) ION, LACTOFERRIN, ...
著者Kumar, J, Weber, W, Munchau, S, Yadav, S, Singh, S.B, Sarvanan, K, Paramsivam, M, Sharma, S, Kaur, P, Bhushan, A, Srinivasan, A, Betzel, C, Singh, T.P.
登録日2002-11-12
公開日2003-02-18
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal Structure of human seminal lactoferrin at 3.4A resolution
Indian J.Biochem.Biophys., 40, 2003
8T2J
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BU of 8t2j by Molmil
Structure of the catalytic domain of PPM1D/Wip1 serine/threonine phosphatase
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, MAGNESIUM ION, ...
著者Kumar, J.P, Kosek, D, Dyda, F.
登録日2023-06-06
公開日2024-06-12
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure and mechanistic studies of the PPM1D serine/threonine phosphatase catalytic domain.
J.Biol.Chem., 300, 2024
5Z2G
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BU of 5z2g by Molmil
Crystal Structure of L-amino acid oxidase from venom of Naja atra
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, L-amino acid oxidase
著者Kumar, J.V, Chien, K.Y, Wu, W.G, Lin, C.C, Chiang, L.C, Lin, T.H.
登録日2018-01-02
公開日2018-06-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.676 Å)
主引用文献Crystal Structure of L-amino acid oxidase from naja atra (Taiwan Cobra)
To Be Published
1OWQ
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BU of 1owq by Molmil
Crystal structure of a 40 kDa signalling protein (SPC-40) secreted during involution
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, signal processing protein
著者Kumar, J, Sharma, S, Jasti, J, Bhushan, A, Singh, T.P.
登録日2003-03-29
公開日2004-05-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a 40 kDa signalling protein (SPC-40) secreted during involution
To be Published
1ZBV
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BU of 1zbv by Molmil
Crystal Structure of the goat signalling protein (SPG-40) complexed with a designed peptide Trp-Pro-Trp at 3.2A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3 like protein 1, WPW
著者Kumar, J, Ethayathulla, A.S, Srivastava, D.B, Singh, N, Sharma, S, Somvanshi, R.K, Dey, S, Singh, T.P.
登録日2005-04-09
公開日2005-04-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Crystal Structure of the goat signalling protein (SPG-40) complexed with a designed peptide Trp-Pro-Trp at 3.2A resolution
to be published
2DSZ
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BU of 2dsz by Molmil
Three dimensional structure of a goat signalling protein secreted during involution
分子名称: Chitinase-3-like protein 1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kumar, J, Ethayathulla, A.S, Singh, N, Ujwal, R, Srivastava, D.B, Sharma, S, Singh, T.P.
登録日2006-07-09
公開日2006-08-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Carbohydrate-binding properties of goat secretory glycoprotein (SPG-40) and its functional implications: structures of the native glycoprotein and its four complexes with chitin-like oligosaccharides
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
2DT0
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BU of 2dt0 by Molmil
Crystal structure of the complex of goat signalling protein with the trimer of N-acetylglucosamine at 2.45A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3-like protein 1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kumar, J, Ethayathulla, A.S, Srivastava, D.B, Singh, N, Sharma, S, Bhushan, A, Srinivasan, A, Singh, T.P.
登録日2006-07-09
公開日2006-07-25
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Carbohydrate-binding properties of goat secretory glycoprotein (SPG-40) and its functional implications: structures of the native glycoprotein and its four complexes with chitin-like oligosaccharides
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
1ZBW
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BU of 1zbw by Molmil
Crystal structure of the complex formed between signalling protein from goat mammary gland (SPG-40) and a tripeptide Trp-Pro-Trp at 2.8A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3 like protein 1, WPW
著者Kumar, J, Ethayathulla, A.S, Srivastava, D.B, Singh, N, Sharma, S, Somvanshi, R.K, Dey, S, Singh, T.P.
登録日2005-04-09
公開日2005-04-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the complex formed between signalling protein from goat mammary gland (SPG-40) and a tripeptide Trp-Pro-Trp at 2.8A resolution
to be published
2AOS
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Protein-protein Interactions of protective signalling factor: Crystal structure of ternary complex involving signalling protein from goat (SPG-40), tetrasaccharide and a tripeptide Trp-pro-Trp at 2.9 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Signaling protein from goat, SPG-40, ...
著者Kumar, J, Ethayathulla, A.S, Srivastava, D.B, Somvanshi, R.K, Singh, N, Sharma, S, Dey, S, Bhushan, A, Kaur, P, Singh, T.P.
登録日2005-08-14
公開日2005-09-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Protein-protein Interactions of protective signalling factor: Crystal structure of ternary complex involving signalling protein from goat (SPG-40), tetrasaccharide and a tripeptide Trp-pro-Trp at 2.9 A resolution
To be Published
2ESC
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BU of 2esc by Molmil
Crystal structure of a 40 KDa protective signalling protein from Bovine (SPC-40) at 2.1 A resolution
分子名称: Chitinase-3-like protein 1, alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kumar, J, Ethayathulla, A.S, Srivastav, D.B, Sharma, S, Srinivasan, A, Singh, T.P.
登録日2005-10-26
公開日2005-12-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of a bovine secretory signalling glycoprotein (SPC-40) at 2.1 Angstrom resolution.
Acta Crystallogr.,Sect.D, 62, 2006
2DT3
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Crystal structure of the complex formed between goat signalling protein and the hexasaccharide at 2.28 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3-like protein 1, alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kumar, J, Ethayathulla, A.S, Srivastava, D.B, Singh, N, Sharma, S, Singh, T.P.
登録日2006-07-09
公開日2006-08-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Carbohydrate-binding properties of goat secretory glycoprotein (SPG-40) and its functional implications: structures of the native glycoprotein and its four complexes with chitin-like oligosaccharides
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
2DT1
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Crystal Structure Of The Complex Of Goat Signalling Protein With Tetrasaccharide At 2.09 A Resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3-like protein 1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kumar, J, Ethayathulla, A.S, Srivastava, D.B, Singh, N, Sharma, S, Bhushan, A, Kaur, P, Singh, T.P.
登録日2006-07-09
公開日2006-08-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Carbohydrate-binding properties of goat secretory glycoprotein (SPG-40) and its functional implications: structures of the native glycoprotein and its four complexes with chitin-like oligosaccharides
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
6LU9
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Rat ionotropic Glutamate Delta-2 receptor in complex with 7-CKA and Calcium
分子名称: Glutamate receptor ionotropic, delta-2
著者Kumar, J, Burada, A.P.
登録日2020-01-27
公開日2020-06-17
最終更新日2020-12-30
実験手法ELECTRON MICROSCOPY (8.8 Å)
主引用文献The architecture of GluD2 ionotropic delta glutamate receptor elucidated by cryo-EM.
J.Struct.Biol., 211, 2020
3OLZ
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BU of 3olz by Molmil
Crystal structure of the GluK3 (GluR7) ATD dimer at 2.75 Angstrom resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glutamate receptor, ...
著者Kumar, J, Mayer, M.L.
登録日2010-08-26
公開日2010-11-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal Structures of the Glutamate Receptor Ion Channel GluK3 and GluK5 Amino-Terminal Domains.
J.Mol.Biol., 404, 2010

 

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