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PDB: 215 件

4LKB
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Crystal structure of a putative 4-Oxalocrotonate Tautomerase from Nostoc sp. PCC 7120
分子名称: GLYCEROL, SULFATE ION, hypothetical protein alr4568/putative 4-Oxalocrotonate Tautomerase
著者Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-07-07
公開日2013-07-24
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Crystal structure of a putative 4-Oxalocrotonate Tautomerase from Nostoc sp. PCC 7120
To be Published
4LK5
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Crystal structure of a enoyl-CoA hydratase from Mycobacterium avium subsp. paratuberculosis K-10
分子名称: enoyl-CoA hydratase
著者Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-07-06
公開日2013-07-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a enoyl-CoA hydratase from Mycobacterium avium subsp. paratuberculosis K-10
To be Published
4JFC
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Crystal structure of a enoyl-CoA hydratase from Polaromonas sp. JS666
分子名称: Enoyl-CoA hydratase, GLYCEROL
著者Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-02-28
公開日2013-05-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of a enoyl-CoA hydratase from Polaromonas sp. JS666
To be Published
4M1A
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Crystal structure of a Domain of unknown function (DUF1904) from Sebaldella termitidis ATCC 33386
分子名称: Hypothetical protein
著者Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-08-02
公開日2013-08-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a Domain of unknown function (DUF1904) from Sebaldellatermitidis ATCC 33386
To be Published
6OQE
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X-ray structure of H6N6-NS1 delta(80-84) R38A K41A mutant
分子名称: Non-structural protein 1
著者Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
登録日2019-04-26
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.899 Å)
主引用文献Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity.
J.Virol., 93, 2019
1Y7H
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Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241
分子名称: THIOCYANATE ION, salicylic acid-binding protein 2
著者Forouhar, F, Yang, Y, Kumar, D, Chen, Y, Fridman, E, Park, S.W, Chiang, Y, Acton, T.B, Montelione, G.T, Pichersky, E, Klessig, D.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2004-12-08
公開日2004-12-28
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structural and biochemical studies identify tobacco SABP2 as a methyl salicylate esterase and implicate it in plant innate immunity
Proc.Natl.Acad.Sci.Usa, 102, 2005
1Y7I
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Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241
分子名称: 2-HYDROXYBENZOIC ACID, salicylic acid-binding protein 2
著者Forouhar, F, Yang, Y, Kumar, D, Chen, Y, Fridman, E, Park, S.W, Chiang, Y, Acton, T.B, Montelione, G.T, Pichersky, E, Klessig, D.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2004-12-08
公開日2004-12-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and biochemical studies identify tobacco SABP2 as a methyl salicylate esterase and implicate it in plant innate immunity
Proc.Natl.Acad.Sci.USA, 102, 2005
6NRL
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X-ray structure of H6N6-NS1 delta(80-84) R38A K41A E71G mutant
分子名称: Non-structural protein 1
著者Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
登録日2019-01-23
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity.
J.Virol., 93, 2019
6O01
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X-ray structure of H5N1-NS1 R38A K41A G71E mutant
分子名称: Non-structural protein 1
著者Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
登録日2019-02-14
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity.
J.Virol., 93, 2019
4LQ6
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BU of 4lq6 by Molmil
Crystal structure of Rv3717 reveals a novel amidase from M. tuberculosis
分子名称: CHLORIDE ION, N-acetymuramyl-L-alanine amidase-related protein, PLATINUM (II) ION, ...
著者Kumar, A, Kumar, S, Kumar, D, Mishra, A, Dewangan, R.P, Shrivastava, P, Ramachandran, S, Taneja, B.
登録日2013-07-17
公開日2013-12-04
最終更新日2014-01-15
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献The structure of Rv3717 reveals a novel amidase from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 69, 2013
5ZUR
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Achromobacter Dh1f Bacterioferritin
分子名称: BARIUM ION, Bacterioferritin, CHLORIDE ION, ...
著者Dwivedy, A, Jha, B, Singh, K.H, Ahmed, M, Ashraf, A, Kumar, D, Biswal, B.K.
登録日2018-05-08
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Serendipitous crystallization and structure determination of bacterioferritin from Achromobacter.
Acta Crystallogr F Struct Biol Commun, 74, 2018
5ZVJ
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Crystal structure of HtrA1 from Mycobacterium tuberculosis
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Serine protease
著者Khundrakpam, H.S, Yadav, S, Kumar, D, Biswal, B.K.
登録日2018-05-10
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The crystal structure of an essential high-temperature requirement protein HtrA1 (Rv1223) from Mycobacterium tuberculosis reveals its unique features.
Acta Crystallogr D Struct Biol, 74, 2018
5YNR
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BU of 5ynr by Molmil
Solution Structure of glia maturation factor from Caenorhabditis elegans
分子名称: Glia Mutation factor
著者Maheshwari, D, Shukla, V.K, Kumar, D, Arora, A.
登録日2017-10-25
公開日2018-10-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of glia maturation factor from Caenorhabditis elegans
Biochim Biophys Acta Proteins Proteom, 1866, 2018
2MV2
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BU of 2mv2 by Molmil
Solution structure of Twinstar from Drosophila melanogastor
分子名称: Cofilin/actin-depolymerizing factor homolog
著者Shukla, V.K, Maheshwari, D, Kumar, D, Arora, A.
登録日2014-09-20
公開日2015-09-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of Twinstar from Drosophila melanogastor
To be Published
5ZON
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BU of 5zon by Molmil
Histidinol phosphate phosphatase from Mycobacterium tuberculosis
分子名称: GLYCEROL, Histidinol-phosphatase, PHOSPHATE ION, ...
著者Jha, B, Kumar, D, Biswal, B.K.
登録日2018-04-13
公開日2018-05-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Identification and structural characterization of a histidinol phosphate phosphatase from Mycobacterium tuberculosis
J. Biol. Chem., 293, 2018
2LXX
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Solution structure of cofilin like UNC-60B protein from Caenorhabditis elegans
分子名称: Actin-depolymerizing factor 2, isoform c
著者Shukla, V, Yadav, R, Kabra, A, Jain, A, Kumar, D, Ono, S, Arora, A.
登録日2012-09-04
公開日2013-10-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of UNC-60B from Caenorhabditis elegans
To be Published
2MAZ
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BU of 2maz by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for Bovine Apo Calbindin
分子名称: Protein S100-G
著者Raikwal, N, Kumar, D.
登録日2013-07-22
公開日2013-08-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Prot3DNMR: A Simple and Swift NMR Strategy for Three-Dimensional Structure Determination of Proteins
To be Published
2MP4
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BU of 2mp4 by Molmil
Solution Structure of ADF like UNC-60A Protein of Caenorhabditis elegans
分子名称: Actin-depolymerizing factor 1, isoforms a/b
著者Shukla, V, Yadav, R, Kabra, A, Kumar, D, Ono, S, Arora, A.
登録日2014-05-11
公開日2014-06-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR Structure and Backbone dynamics of ADF like UNC-60A protein from Caenorhabditis elegans: its divergence from conventional ADF/cofilin
To be Published
7MHF
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Crystal Structure of SARS-CoV-2 Main Protease (Mpro) at 100 K
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
著者Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
登録日2021-04-15
公開日2021-05-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022
7MHG
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Crystal Structure of SARS-CoV-2 Main Protease (Mpro) at 240 K
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
著者Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
登録日2021-04-15
公開日2021-05-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5302 Å)
主引用文献The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022
7MHL
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Ensemble refinement structure of SARS-CoV-2 main protease (Mpro) at 100 K
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
著者Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
登録日2021-04-15
公開日2021-05-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022
7MHM
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BU of 7mhm by Molmil
Ensemble refinement structure of SARS-CoV-2 main protease (Mpro) at 240 K
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
著者Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
登録日2021-04-15
公開日2021-05-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5302 Å)
主引用文献The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022
3T81
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Crystal Structure of diiron adenine deaminase
分子名称: Adenine deaminase 2, FE (III) ION
著者Bagaria, A, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2011-08-01
公開日2011-11-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Crystal Structure of diiron adenine deaminase
TO BE PUBLISHED
7MHK
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Crystal Structure of Apo/Unliganded SARS-CoV-2 Main Protease (Mpro) at 310 K
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
著者Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
登録日2021-04-15
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9601 Å)
主引用文献The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022
7MNG
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Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) in Complex with Covalent Inhibitor VBY-825 (Partial Occupancy)
分子名称: (2R,3S)-N-cyclopropyl-3-{[(2R)-3-(cyclopropylmethanesulfonyl)-2-{[(1S)-2,2,2-trifluoro-1-(4-fluorophenyl)ethyl]amino}propanoyl]amino}-2-hydroxypentanamide (non-preferred name), 3C-like proteinase, DIMETHYL SULFOXIDE
著者Andi, B, Kumaran, D, Soares, A.S, Kreitler, D.F, Shi, W, Jakoncic, J, Fuchs, M.R, Keereetaweep, J, Shanklin, J, McSweeney, S.
登録日2021-04-30
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Hepatitis C virus NS3/4A inhibitors and other drug-like compounds as covalent binders of SARS-CoV-2 main protease.
Sci Rep, 12, 2022

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件を2024-07-31に公開中

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