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PDB: 215 件
6O3V
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BU of 6o3v by Molmil
Crystal structure for RVA-VP3
分子名称: 1,2-ETHANEDIOL, GUANOSINE-5'-MONOPHOSPHATE, Protein VP3, ...
著者Kumar, D, Yu, X, Wang, Z, Hu, L, Prasad, V.
登録日2019-02-27
公開日2020-03-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献2.7 angstrom cryo-EM structure of rotavirus core protein VP3, a unique capping machine with a helicase activity.
Sci Adv, 6, 2020
6O6B
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BU of 6o6b by Molmil
Rotavirus A-VP3 (RVA-VP3)
分子名称: GUANOSINE-5'-MONOPHOSPHATE, Protein VP3
著者Kumar, D, Yu, X, Prasad, V, Wang, Z.
登録日2019-03-05
公開日2020-03-11
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献A sub-atomic resolution cryo-EM of full-length Rotavirus A-VP3 (RVA-VP3)
To Be Published
2K1F
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BU of 2k1f by Molmil
SUMO-3 from Drosophila melanogaster (dsmt3)
分子名称: CG4494-PA
著者Kumar, D, Misra, J.R, Misra, A.K, Chugh, J, Sharma, S, Hosur, R.V.
登録日2008-03-03
公開日2009-03-10
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR-derived solution structure of SUMO from Drosophila melanogaster (dSmt3).
Proteins, 75, 2009
2LJ3
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BU of 2lj3 by Molmil
PFBD: High-throughput Strategy of Backbone fold Determination for small well-folded proteins in less than a day
分子名称: Spectrin alpha chain, brain
著者Kumar, D, Hosur, R.
登録日2011-09-04
公開日2011-12-07
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献PFBD: High-throughput Strategy of Backbone fold Determination for small well-folded proteins in less than a day
To be Published
2LD9
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BU of 2ld9 by Molmil
Backbone Structure of Ubiquitin determined using Backbone amide NOEs and Backbone N-H and N-C RDCs
分子名称: Ubiquitin
著者Kumar, D, Hosur, R.
登録日2011-05-18
公開日2011-06-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献AUTOBA: Automation of Backbone Assignment from HN(C)N Suite of Experiments
To be Published
5XDS
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BU of 5xds by Molmil
Crystal structure of Mycobacterium tuberculosis HisB bound with an inhibitor
分子名称: (2S)-2-azanyl-3-(4H-1,2,4-triazol-3-yl)propanoic acid, CHLORIDE ION, Imidazoleglycerol-phosphate dehydratase, ...
著者Kumar, D, Jha, B, Ahangar, M.S, Kumar, B.B.
登録日2017-03-29
公開日2018-04-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Characterization of a triazole scaffold compound as an inhibitor of Mycobacterium tuberculosis imidazoleglycerol-phosphate dehydratase.
Proteins, 2021
5ZQN
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BU of 5zqn by Molmil
Crystal structure of Mycobacterium tuberculosis HisB in complex with a ligand
分子名称: (2R,3S)-2,3-dihydroxy-3-(1H-imidazol-5-yl)propyl dihydrogen phosphate, CHLORIDE ION, Imidazoleglycerol-phosphate dehydratase, ...
著者Kumar, D, Pal, R.K, Biswal, B.K.
登録日2018-04-19
公開日2018-05-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Characterization of a triazole scaffold compound as an inhibitor of Mycobacterium tuberculosis imidazoleglycerol-phosphate dehydratase.
Proteins, 2021
6KHH
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BU of 6khh by Molmil
Crystal Structure of HisB from Mycobacterium tuberculosis
分子名称: ACETAMIDE, CHLORIDE ION, Imidazoleglycerol-phosphate dehydratase, ...
著者Kumar, D, Jha, B, Pal, R.K, Biswal, B.K.
登録日2019-07-15
公開日2020-07-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Characterization of a triazole scaffold compound as an inhibitor of Mycobacterium tuberculosis imidazoleglycerol-phosphate dehydratase.
Proteins, 2021
5C82
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BU of 5c82 by Molmil
Crystal structure of Nourseothricin acetyltransferase
分子名称: D(-)-TARTARIC ACID, Nourseothricin acetyltransferase
著者Kumar, D, Ghosh, A, Taneja, B, Chakraborty, K.
登録日2015-06-25
公開日2016-06-29
最終更新日2018-07-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Nourseothricin acetyltransferase
To Be Published
4LS9
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BU of 4ls9 by Molmil
Structure of mycobacterial nrnA homolog reveals multifunctional nuclease activities
分子名称: DHH family protein, GLYCEROL, MANGANESE (II) ION
著者Kumar, D, Srivastav, R, Grover, A, Manjasetty, B.A, Sharma, R, Taneja, B.
登録日2013-07-22
公開日2014-07-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Unique subunit packing in mycobacterial nanoRNase leads to alternate substrate recognitions in DHH phosphodiesterases
Nucleic Acids Res., 42, 2014
2MW5
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BU of 2mw5 by Molmil
Backbone fold of Human Small Ubiquitin like Modifier protein-1 (SUMO-1) based on Prot3D-NMR approach.
分子名称: Small ubiquitin-related modifier 1
著者Kumar, D, Jaiswal, N, Raikwal, N, Shukla, V, Arora, A.
登録日2014-10-28
公開日2014-12-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Prot3DNMR: A simple and swift NMR strategy for Three-Dimentional structutral determination of proteins.
To be Published
2MOT
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BU of 2mot by Molmil
Backbone Structure of Actin Depolymerizing Factor (ADF) of Toxoplasma gondii Based on Prot3DNMR Approach
分子名称: Actin depolymerizing factor ADF
著者Kumar, D, Raikwal, N, Raval, I, Jaiswal, N, Shukla, V, Arora, A.
登録日2014-05-05
公開日2015-05-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Prot3DNMR: A Simple and Swift Strategy for Backbone Structure Determination of Proteins by NMR
To be Published
2G59
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BU of 2g59 by Molmil
Crystal Structure of the Catalytic Domain of Protein Tyrosine Phosphatase from Homo sapiens
分子名称: PHOSPHATE ION, Receptor-type tyrosine-protein phosphatase O
著者Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-02-22
公開日2006-03-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structural genomics of protein phosphatases.
J.Struct.Funct.Genom., 8, 2007
1I4P
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BU of 1i4p by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 5.5
分子名称: ENTEROTOXIN TYPE C-2, ZINC ION
著者Kumaran, D, Swaminathan, S.
登録日2001-02-22
公開日2001-03-14
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
1I4R
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BU of 1i4r by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 6.5
分子名称: ENTEROTOXIN TYPE C-2, ZINC ION
著者Kumaran, D, Swaminathan, S.
登録日2001-02-22
公開日2001-03-14
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
1I4Q
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BU of 1i4q by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 6.0
分子名称: ENTEROTOXIN TYPE C-2, ZINC ION
著者Kumaran, D, Swaminathan, S.
登録日2001-02-22
公開日2001-03-14
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
8GDW
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BU of 8gdw by Molmil
Crystal structure of Domain Related to Iron (DRI) from cyanobacteria
分子名称: Ssr1698 protein, ZINC ION
著者Kumaran, D, Grosjean, N, Blaby, E.C.
登録日2023-03-06
公開日2024-03-13
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A hemoprotein with a zinc-mirror heme site ties heme availability to carbon metabolism in cyanobacteria.
Nat Commun, 15, 2024
8GF4
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BU of 8gf4 by Molmil
Crystal structure of Domain Related to Iron (DRI) in complex with heme
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Ssr1698 protein, ZINC ION
著者Kumaran, D, Blaby, E.C.
登録日2023-03-07
公開日2024-03-13
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A hemoprotein with a zinc-mirror heme site ties heme availability to carbon metabolism in cyanobacteria.
Nat Commun, 15, 2024
3BBL
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BU of 3bbl by Molmil
Crystal structure of a regulatory protein of LacI family from Chloroflexus aggregans
分子名称: 1,2-ETHANEDIOL, Regulatory protein of LacI family
著者Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-11-09
公開日2007-11-27
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of a regulatory protein of LacI family from the Chloroflexus aggregans.
To be Published
3BGA
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BU of 3bga by Molmil
Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482
分子名称: Beta-galactosidase, CHLORIDE ION, MAGNESIUM ION, ...
著者Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-11-26
公開日2007-12-11
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure analysis of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482.
To be Published
3C8A
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BU of 3c8a by Molmil
Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with inhibitory peptide RRGL
分子名称: Botulinum neurotoxin A light chain, Inhibitor peptide RRGL, SULFATE ION, ...
著者Kumaran, D, Swaminathan, S.
登録日2008-02-11
公開日2008-04-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A
J.Biol.Chem., 283, 2008
1CQV
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BU of 1cqv by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 5.0
分子名称: PROTEIN (STAPHYLOCOCCAL ENTEROTOXIN C2), ZINC ION
著者Kumaran, D, Swaminathan, S.
登録日1999-08-11
公開日1999-08-22
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
3BWI
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BU of 3bwi by Molmil
Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with an acetate ion bound at the active site
分子名称: ACETATE ION, Botulinum neurotoxin A light chain, SULFATE ION, ...
著者Kumaran, D, Rawat, R, Swaminathan, S.
登録日2008-01-09
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A
J.Biol.Chem., 283, 2008
3C88
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BU of 3c88 by Molmil
Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with inhibitory peptide RRGC
分子名称: Botulinum neurotoxin A light chain, Inhibitor peptide RRGC, SODIUM ION, ...
著者Kumaran, D, Swaminathan, S.
登録日2008-02-11
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A
J.Biol.Chem., 283, 2008
3C89
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BU of 3c89 by Molmil
Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with inhibitory peptide RRGM
分子名称: Botulinum neurotoxin A light chain, Inhibitor peptide RRGM, SULFATE ION, ...
著者Kumaran, D, Swaminathan, S.
登録日2008-02-11
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A
J.Biol.Chem., 283, 2008

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