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PDB: 45 results

1QJH
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Protein Aggregation and Alzheimer's Disease: Crystallographic Analysis of the Phenomenon. Engineered version of the ribosomal protein S6 used as a stable scaffold to study oligomerization.
Descriptor: 30S ribosomal protein S6, MAGNESIUM ION
Authors:Kristensen, O, Otzen, D.E, Oliveberg, M.
Deposit date:1999-06-24
Release date:2000-06-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly.
Proc. Natl. Acad. Sci. U.S.A., 97, 2000
5IKB
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BU of 5ikb by Molmil
Crystal structure of the kainate receptor GluK4 ligand binding domain in complex with kainate
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, GLYCEROL, Glutamate receptor ionotropic, ...
Authors:Kristensen, O, Kristensen, L.B, Frydenvang, K, Kastrup, J.S.
Deposit date:2016-03-03
Release date:2016-08-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Structure of a High-Affinity Kainate Receptor: GluK4 Ligand-Binding Domain Crystallized with Kainate.
Structure, 24, 2016
5DRV
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Crystal structure of the G3BP2 NTF2-like domain in complex with a peptide
Descriptor: Non-structural protein 3, Ras GTPase-activating protein-binding protein 2
Authors:Kristensen, O.
Deposit date:2015-09-16
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of the G3BP2 NTF2-like domain in complex with a canonical FGDF motif peptide.
Biochem.Biophys.Res.Commun., 467, 2015
1T6C
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Structural characterization of the Ppx/GppA protein family: crystal structure of the Aquifex aeolicus family member
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Kristensen, O, Laurberg, M, Liljas, A, Kastrup, J.S, Gajhede, M.
Deposit date:2004-05-06
Release date:2004-08-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural characterization of the stringent response related exopolyphosphatase/guanosine pentaphosphate phosphohydrolase protein family
Biochemistry, 43, 2004
1T6D
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MIRAS phasing of the Aquifex aeolicus Ppx/GppA phosphatase: crystal structure of the type II variant
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, exopolyphosphatase
Authors:Kristensen, O, Laurberg, M, Liljas, A, Kastrup, J.S, Gajhede, M.
Deposit date:2004-05-06
Release date:2004-08-03
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural characterization of the stringent response related exopolyphosphatase/guanosine pentaphosphate phosphohydrolase protein family
Biochemistry, 43, 2004
1CQN
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PROTEIN AGGREGATION AND ALZHEIMER'S DISEASE: CRYSTALLOGRAPHIC ANALYSIS OF THE PHENOMENON. ENGINEERED VERSION OF THE RIBOSOMAL PROTEIN S6 USED AS A STABLE SCAFFOLD TO STUDY OLIGOMERIZATION.
Descriptor: RIBOSOMAL PROTEIN S6
Authors:Kristensen, O, Otzen, D.E, Oliveberg, M.
Deposit date:1999-08-08
Release date:2000-09-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly.
Proc.Natl.Acad.Sci.USA, 97, 2000
1CQM
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PROTEIN AGGREGATION AND ALZHEIMER'S DISEASE: CRYSTALLOGRAPHIC ANALYSIS OF THE PHENOMENON. ENGINEERED VERSION OF THE RIBOSOMAL PROTEIN S6 USED AS A STABLE SCAFFOLD TO STUDY OLIGOMERIZATION.
Descriptor: RIBOSOMAL PROTEIN S6
Authors:Kristensen, O, Otzen, D.E, Oliveberg, M.
Deposit date:1999-08-08
Release date:2000-09-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly.
Proc.Natl.Acad.Sci.USA, 97, 2000
1P9Y
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Ribosome binding of E. coli Trigger Factor mutant F44L.
Descriptor: ACETIC ACID, Trigger factor
Authors:Kristensen, O, Gajhede, M.
Deposit date:2003-05-13
Release date:2003-12-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Chaperone binding at the ribosomal exit tunnel.
Structure, 11, 2003
1OMS
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Structure determination by MAD: E.coli Trigger Factor binding at the ribosomal exit tunnel.
Descriptor: GLYCEROL, SULFATE ION, SULFUR DIOXIDE, ...
Authors:Kristensen, O, Gajhede, M.
Deposit date:2003-02-26
Release date:2003-12-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Chaperone binding at the ribosomal exit tunnel.
Structure, 11, 2003
1OB2
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E. coli elongation factor EF-Tu complexed with the antibiotic kirromycin, a GTP analog, and Phe-tRNA
Descriptor: ELONGATION FACTOR TU, KIRROMYCIN, MAGNESIUM ION, ...
Authors:Kristensen, O, Nissen, P, Nyborg, J.
Deposit date:2003-01-24
Release date:2004-05-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Kirromycin Defines a Specific Domain Arrangement of Elongation Factor EF-TU
To be Published
2J4R
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Structural Study of the Aquifex aeolicus PPX-GPPA enzyme
Descriptor: EXOPOLYPHOSPHATASE, GUANOSINE-5',3'-TETRAPHOSPHATE
Authors:Kristensen, O.
Deposit date:2006-09-05
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structure of the Ppx/Gppa Phosphatase from Aquifex Aeolicus in Complex with the Alarmone Ppgpp
J.Mol.Biol., 375, 2008
2FPF
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Crystal structure of the ib1 sh3 dimer at low resolution
Descriptor: C-jun-amino-terminal kinase interacting protein 1
Authors:Kristensen, O, Dar, I, Gajhede, M.
Deposit date:2006-01-16
Release date:2006-02-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:A unique set of SH3-SH3 interactions controls IB1 homodimerization
Embo J., 25, 2006
2FPD
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Sad structure determination: crystal structure of the intrinsic dimerization sh3 domain of the ib1 scaffold protein
Descriptor: C-jun-amino-terminal kinase interacting protein 1, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Kristensen, O, Dar, I, Gajhede, M.
Deposit date:2006-01-16
Release date:2006-02-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A unique set of SH3-SH3 interactions controls IB1 homodimerization
Embo J., 25, 2006
2DQU
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Crystal form II: high resolution crystal structure of the complex of the hydrolytic antibody Fab 6D9 and a transition-state analog
Descriptor: IMMUNOGLOBULIN 6D9, [1-(3-DIMETHYLAMINO-PROPYL)-3-ETHYL-UREIDO]-[4-(2,2,2-TRIFLUORO-ACETYLAMINO)-BENZYL]PHOSPHINIC ACID-2-(2,2-DIHYDRO-ACETYLAMINO)-3-HYDROXY-1-(4-NITROPHENYL)-PROPYL ESTER
Authors:Kristensen, O, Vassylyev, D.G, Tanaka, F, Ito, N, Morikawa, K, Fujii, I.
Deposit date:2006-05-30
Release date:2006-06-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis
J.Mol.Biol., 369, 2007
2DQT
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High resolution crystal structure of the complex of the hydrolytic antibody Fab 6D9 and a transition-state analog
Descriptor: IMMUNOGLOBULIN 6D9, [1-(3-DIMETHYLAMINO-PROPYL)-3-ETHYL-UREIDO]-[4-(2,2,2-TRIFLUORO-ACETYLAMINO)-BENZYL]PHOSPHINIC ACID-2-(2,2-DIHYDRO-ACETYLAMINO)-3-HYDROXY-1-(4-NITROPHENYL)-PROPYL ESTER
Authors:Kristensen, O, Vassylyev, D.G, Tanaka, F, Ito, N, Morikawa, K, Fujii, I.
Deposit date:2006-05-30
Release date:2006-06-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis
J.Mol.Biol., 369, 2007
3C9N
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BU of 3c9n by Molmil
Crystal Structure of a SARS Corona Virus Derived Peptide Bound to the Human Major Histocompatibility Complex Class I molecule HLA-B*1501
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Roder, G.A, Kristensen, O, Kastrup, J.S, Buus, S, Gajhede, M.
Deposit date:2008-02-18
Release date:2008-02-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structure of a SARS coronavirus-derived peptide bound to the human major histocompatibility complex class I molecule HLA-B*1501.
ACTA CRYSTALLOGR.,SECT.F, 64, 2008
4ZG1
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BU of 4zg1 by Molmil
Crystal structure of a nanobody raised against KDM5B
Descriptor: NB17
Authors:Wiuf, A, Kristensen, O, Gajhede, M.
Deposit date:2015-04-22
Release date:2015-05-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and binding properties of a cameloid nanobody raised against KDM5B.
Acta Crystallogr.,Sect.F, 71, 2015
6FF3
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BU of 6ff3 by Molmil
Crystal structure of Drosophila neural ectodermal development factor Imp-L1 with Human IGF-I
Descriptor: Insulin-like growth factor I, Neural/ectodermal development factor IMP-L2
Authors:Brzozowski, A.M, Kulahin, N, Kristensen, O, Schluckebier, G, Meyts, P.D, Viola, C.M.
Deposit date:2018-01-03
Release date:2018-09-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structures of insect Imp-L2 suggest an alternative strategy for regulating the bioavailability of insulin-like hormones.
Nat Commun, 9, 2018
6FEY
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Crystal structure of Drosophila neural ectodermal development factor Imp-L2 with Drosophila DILP5 insulin
Descriptor: Neural/ectodermal development factor IMP-L2, Probable insulin-like peptide 5
Authors:Brzozowski, A.M, Kulahin, N, Kristensen, O, Schluckebier, G, Meyts, P.D.
Deposit date:2018-01-03
Release date:2018-09-26
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Structures of insect Imp-L2 suggest an alternative strategy for regulating the bioavailability of insulin-like hormones.
Nat Commun, 9, 2018
3IJT
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BU of 3ijt by Molmil
Structural Characterization of SMU.440, a Hypothetical Protein from Streptococcus mutans
Descriptor: Putative uncharacterized protein
Authors:Nan, J, Brostromer, E, Kristensen, O, Su, X.-D.
Deposit date:2009-08-05
Release date:2009-08-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.377 Å)
Cite:Bioinformatics and structural characterization of a hypothetical protein from Streptococcus mutans: implication of antibiotic resistance
Plos One, 4, 2009
4IIA
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BU of 4iia by Molmil
Low resolution crystal structure of the NTF2-like domain of human G3BP1
Descriptor: PHOSPHATE ION, Ras GTPase-activating protein-binding protein 1
Authors:Vognsen, T, Moeller, I.R, Kristensen, O.
Deposit date:2012-12-20
Release date:2013-12-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structures of the Human G3BP1 NTF2-Like Domain Visualize FxFG Nup Repeat Specificity.
Plos One, 8, 2013
1FEU
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CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA.
Descriptor: 19 NT FRAGMENT OF 5S RRNA, 21 NT FRAGMENT OF 5S RRNA, 50S RIBOSOMAL PROTEIN L25, ...
Authors:Fedorov, R.V, Meshcheryakov, V.A, Gongadze, G.M, Fomenkova, N.P, Nevskaya, N.A, Selmer, M, Laurberg, M, Kristensen, O, Al-Karadaghi, S, Liljas, A, Garber, M.B, Nikonov, S.V.
Deposit date:2000-07-23
Release date:2001-06-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of ribosomal protein TL5 complexed with RNA provides new insights into the CTC family of stress proteins.
Acta Crystallogr.,Sect.D, 57, 2001
1FNM
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STRUCTURE OF THERMUS THERMOPHILUS EF-G H573A
Descriptor: ELONGATION FACTOR G, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Laurberg, M, Kristensen, O, Martemyanov, K, Gudkov, A.T, Nagaev, I, Hughes, D, Liljas, A.
Deposit date:2000-08-22
Release date:2000-11-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a mutant EF-G reveals domain III and possibly the fusidic acid binding site.
J.Mol.Biol., 303, 2000
3UJM
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Crystal structure of the NTF2-like domain of the Drosophila melanogaster Rasputin protein
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Rasputin
Authors:Vognsen, T, Kristensen, O.
Deposit date:2011-11-08
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.741 Å)
Cite:Crystal structure of the Rasputin NTF2-like domain from Drosophila melanogaster.
Biochem.Biophys.Res.Commun., 420, 2012
4CBP
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Crystal structure of neural ectodermal development factor IMP-L2.
Descriptor: GLYCEROL, NEURAL/ECTODERMAL DEVELOPMENT FACTOR IMP-L2
Authors:Kulahin, N, Kristensen, O, Brzozowski, M, Schluckebier, G, Meyts, P.D.
Deposit date:2013-10-15
Release date:2014-10-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Analysis of Imp-L2 Function
To be Published

 

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