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PDB: 2433 件

2DB3
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Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa
分子名称: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ATP-dependent RNA helicase vasa, MAGNESIUM ION, ...
著者Sengoku, T, Nureki, O, Nakamura, A, Kobayashi, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-14
公開日2006-05-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa.
Cell(Cambridge,Mass.), 125, 2006
3AB3
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Crystal structure of p115RhoGEF RGS domain in complex with G alpha 13
分子名称: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(k) subunit alpha, Guanine nucleotide-binding protein subunit alpha-13, ...
著者Kukimoto-Niino, M, Mishima, C, Shirouzu, M, Kozasa, T, Yokoyama, S.
登録日2009-11-30
公開日2010-12-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of critical residues in G(alpha)13 for stimulation of p115RhoGEF activity and the structure of the G(alpha)13-p115RhoGEF regulator of G protein signaling homology (RH) domain complex.
J.Biol.Chem., 286, 2011
2DC5
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Crystal structure of mouse glutathione S-transferase, mu7 (GSTM7) at 1.6 A resolution
分子名称: Glutathione S-transferase, mu 7
著者Kamo, S, Kishishita, S, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-28
公開日2006-06-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of mouse glutathione S-transferase, mu7 (GSTM7) at 1.6 A resolution
To be Published
3AVS
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Catalytic fragment of UTX/KDM6A bound with N-oxyalylglycine, and Ni(II)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysine-specific demethylase 6A, ...
著者Sengoku, T, Yokoyama, S.
登録日2011-03-07
公開日2011-10-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for histone H3 Lys 27 demethylation by UTX/KDM6A
Genes Dev., 25, 2011
3AVR
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Catalytic fragment of UTX/KDM6A bound with histone H3K27me3 peptide, N-oxyalylglycine, and Ni(II)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Histone H3, ...
著者Sengoku, T, Yokoyama, S.
登録日2011-03-07
公開日2011-10-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Structural basis for histone H3 Lys 27 demethylation by UTX/KDM6A
Genes Dev., 25, 2011
2Z3F
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Crystal structure of spCia1/Asf1 complexed with Cac2 peptide
分子名称: Histone chaperone cia1, SPAC26H5.03 protein
著者Malay, A.D, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-06-04
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structures of Fission Yeast Histone Chaperone Asf1 Complexed with the Hip1 B-domain or the Cac2 C Terminus
J.Biol.Chem., 283, 2008
1UFW
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Solution structure of RNP domain in Synaptojanin 2
分子名称: Synaptojanin 2
著者He, F, Muto, Y, Ushikoshi, R, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nakayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-10
公開日2003-12-10
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of RNP domain in Synaptojanin 2
To be Published
2DWV
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Solution structure of the second WW domain from mouse salvador homolog 1 protein (mWW45)
分子名称: Salvador homolog 1 protein
著者Ohnishi, S, Kigawa, T, Koshiba, S, Tomizawa, T, Sato, M, Tochio, N, Inoue, M, Harada, T, Watanabe, S, Guntert, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-17
公開日2007-02-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of an atypical WW domain in a novel beta-clam-like dimeric form
Febs Lett., 581, 2007
1U2F
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SOLUTION STRUCTURE OF THE FIRST RNA-BINDING DOMAIN OF HU2AF65
分子名称: PROTEIN (SPLICING FACTOR U2AF 65 KD SUBUNIT)
著者Ito, T, Muto, Y, Green, M.R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-05-26
公開日1999-08-20
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structures of the first and second RNA-binding domains of human U2 small nuclear ribonucleoprotein particle auxiliary factor (U2AF(65)).
EMBO J., 18, 1999
2DQ0
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Crystal structure of seryl-tRNA synthetase from Pyrococcus horikoshii complexed with a seryl-adenylate analog
分子名称: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, SULFATE ION, Seryl-tRNA synthetase
著者Itoh, Y, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-05-18
公開日2007-06-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystallographic and mutational studies of seryl-tRNA synthetase from the archaeon Pyrococcus horikoshii.
Rna Biol., 5, 2008
1UGV
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Solution structure of the SH3 domain of human olygophrein-1 like protein (KIAA0621)
分子名称: Olygophrenin-1 like protein
著者Inoue, K, Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nakayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-20
公開日2003-12-20
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the SH3 domain of human olygophrein-1 like protein (KIAA0621)
To be Published
1UGK
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Solution structure of the first C2 domain of synaptotagmin IV from human fetal brain (KIAA1342)
分子名称: Synaptotagmin IV
著者Nagashima, T, Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nakayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-16
公開日2003-12-16
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the first C2 domain of synaptotagmin IV from human fetal brain (KIAA1342)
To be Published
2E8B
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Crystal structure of the putative protein (Aq1419) from Aquifex aeolicus VF5
分子名称: Probable molybdopterin-guanine dinucleotide biosynthesis protein A
著者Kumarevel, T.S, Malathy sony, S.M, Ponnuswamy, M.N, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-01-19
公開日2008-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Crystal structure of the putative protein (Aq1419) from Aquifex aeolicus VF5
To be Published
2YR3
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Solution structure of the fourth Ig-like domain from myosin light chain kinase, smooth muscle
分子名称: Myosin light chain kinase, smooth muscle
著者Qin, X.R, Kurosaki, C, Yoshida, M, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-02
公開日2007-10-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the fourth Ig-like domain from myosin light chain kinase, smooth muscle
To be Published
2YT8
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Solution structure of the PDZ domain of Amyloid beta A4 precursor protein-binding family A member 3 (Neuron- specific X11L2 protein) (Neuronal Munc18-1-interacting protein 3) (Mint-3) (Adapter protein X11gamma)
分子名称: Amyloid beta A4 precursor protein-binding family A member 3
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Seiki, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-05
公開日2008-04-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the PDZ domain of Amyloid beta A4 precursor protein-binding family A member 3 (Neuron- specific X11L2 protein) (Neuronal Munc18-1-interacting protein 3) (Mint-3) (Adapter protein X11gamma)
To be Published
2YQI
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Solution structure of the second HMG-box domain from high mobility group protein B3
分子名称: High mobility group protein B3
著者Qin, X.R, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-30
公開日2008-04-01
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second HMG-box domain from high mobility group protein B3
To be Published
2YUC
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Solution structure of the TRAF-type zinc finger domains (102-164) from human TNF receptor associated factor 4
分子名称: TNF receptor-associated factor 4, ZINC ION
著者Hayashi, F, Suetake, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-06
公開日2008-04-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the TRAF-type zinc finger domains (102-164) from human TNF receptor associated factor 4
To be Published
1V6Z
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Crystal structure of TT1573 from Thermus thermophilus
分子名称: hypothetical protein TTHA0657
著者Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-12-05
公開日2004-12-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of TT1573 from Thermus thermophilus
To be Published
1V9X
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Solution structure of the first Zn-finger domain of poly(ADP-ribose) polymerase-1
分子名称: ZINC ION, poly (ADP-ribose) polymerase
著者Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-02-04
公開日2005-02-22
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the first Zn-finger domain of poly(ADP-ribose) polymerase-1
To be Published
2YUJ
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Solution structure of human ubiquitin fusion degradation protein 1 homolog UFD1
分子名称: Ubiquitin fusion degradation 1-like
著者Saito, K, Tomizawa, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-06
公開日2008-04-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of human ubiquitin fusion degradation protein 1 homolog UFD1
To be Published
2YUD
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Solution structure of the YTH domain in YTH domain-containing protein 1 (Putative splicing factor YT521)
分子名称: YTH domain-containing protein 1
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-06
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the YTH domain in YTH domain-containing protein 1 (Putative splicing factor YT521)
To be Published
1WEP
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Solution structure of PHD domain in PHF8
分子名称: PHF8, ZINC ION
著者He, F, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-25
公開日2004-11-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of PHD domain in protein AA017385
To be Published
2YWF
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Crystal structure of GMPPNP-bound LepA from Aquifex aeolicus
分子名称: GTP-binding protein lepA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-20
公開日2008-04-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Crystal structures of GTP-binding protein LepA from Aquifex aeolicus
To be Published
1WF5
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Solution structure of the first Fn3 domain of Sidekick-2 protein
分子名称: sidekick 2 protein
著者Qin, X, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-26
公開日2005-06-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the first Fn3 domain of Sidekick-2 protein
To be published
1WFD
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Solution structure of mouse MIT domain
分子名称: Hypothetical protein 1500032H18
著者Suetake, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-26
公開日2004-11-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of mouse MIT domain
to be published

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