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PDB: 56 件

7RUT
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Structure of Human ATP:Cobalamin Adenosyltransferase R190C bound to ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Corrinoid adenosyltransferase, GLYCEROL, ...
著者Mascarenhas, R, Gouda, H, Koutmos, M, Banerjee, R.
登録日2021-08-18
公開日2021-11-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Patient mutations in human ATP:cob(I)alamin adenosyltransferase differentially affect its catalytic versus chaperone functions.
J.Biol.Chem., 297, 2021
7RUV
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BU of 7ruv by Molmil
Structure of Human ATP:Cobalamin Adenosyltransferase E193K bound to adenosylcobalamin
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, Corrinoid adenosyltransferase, ...
著者Mascarenhas, R, Gouda, H, Koutmos, M, Banerjee, R.
登録日2021-08-18
公開日2021-11-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Patient mutations in human ATP:cob(I)alamin adenosyltransferase differentially affect its catalytic versus chaperone functions.
J.Biol.Chem., 297, 2021
6XJJ
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BU of 6xjj by Molmil
Structure of non-heme iron enzyme TropC: Radical tropolone biosynthesis
分子名称: 2-oxoglutarate-dependent dioxygenase tropC, ACETATE ION, FE (III) ION, ...
著者Mallik, L, Doyon, T.J, Narayan, A.R.H, Koutmos, M.
登録日2020-06-24
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Radical Tropolone Biosynthesis
Chemrxiv, 2020
6U1R
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SxtG an amidinotransferase from the Microseira wollei in Saxitoxin biosynthetic pathway
分子名称: FORMIC ACID, SxtG
著者Mallik, L, Lukowski, A.L, Narayan, A.R.H, Koutmos, M.
登録日2019-08-16
公開日2020-03-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.792 Å)
主引用文献Substrate Promiscuity of a Paralytic Shellfish Toxin Amidinotransferase.
Acs Chem.Biol., 15, 2020
8UY2
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BU of 8uy2 by Molmil
Methylenetetrahydrofolate reductase from Chaetomium thermophilum DSM 1495, AdoMet-bound, Inhibited (T) State
分子名称: ACETATE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Yamada, K, Mendoza, J, Koutmos, M.
登録日2023-11-12
公開日2024-06-19
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Structural basis of S-adenosylmethionine-dependent allosteric transition from active to inactive states in methylenetetrahydrofolate reductase.
Nat Commun, 15, 2024
8UY1
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Methylenetetrahydrofolate reductase from Chaetomium thermophilum DSM 1495, Active (R) State
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Methylenetetrahydrofolate reductase-like protein
著者Yamada, K, Mendoza, J, Koutmos, M.
登録日2023-11-12
公開日2024-06-19
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Structural basis of S-adenosylmethionine-dependent allosteric transition from active to inactive states in methylenetetrahydrofolate reductase.
Nat Commun, 15, 2024
8D32
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Mycobacterium tuberculosis pduO-type ATP:cobalamin adenosyltransferase bound to 5-deoxyadenosylrhodibalamin and PPPi
分子名称: 5'-DEOXYADENOSINE, Corrinoid adenosyltransferase, MAGNESIUM ION, ...
著者Mascarenhas, R.N, Ruetz, M, Koutmos, M, Banerjee, R.
登録日2022-05-31
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A noble substitution leads to the cofactor mimicry by rhodibalamin
To Be Published
7TH5
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Thermus thermophilus methylenetetrahydrofolate reductase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Methylenetetrahydrofolate reductase, SODIUM ION
著者Yamada, K, Koutmos, M.
登録日2022-01-10
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献5-Formyltetrahydrofolate promotes conformational remodeling in a methylenetetrahydrofolate reductase active site and inhibits its activity.
J.Biol.Chem., 299, 2022
7TH4
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T. thermophilus methylenetetrahydrofolate reductase complex with 5-formyltetrahydrofolate
分子名称: ACETATE ION, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Yamada, K, Koutmos, M.
登録日2022-01-10
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献5-Formyltetrahydrofolate promotes conformational remodeling in a methylenetetrahydrofolate reductase active site and inhibits its activity.
J.Biol.Chem., 299, 2022
8EAC
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BU of 8eac by Molmil
Thermus thermophilus methylenetetrahydrofolate reductase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Methylenetetrahydrofolate reductase
著者Yamada, K, Koutmos, M.
登録日2022-08-28
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献5-Formyltetrahydrofolate promotes conformational remodeling in a methylenetetrahydrofolate reductase active site and inhibits its activity.
J.Biol.Chem., 299, 2022
8SSG
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Minimal protein-only/RNA-free Ribonuclease P from Hydrogenobacter thermophilus
分子名称: RNA-free ribonuclease P
著者Mendoza, J, Wilhelm, C.A, Mallik, L, Koutmos, M.
登録日2023-05-08
公開日2023-10-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Bacterial RNA-free RNase P: Structural and functional characterization of multiple oligomeric forms of a minimal protein-only ribonuclease P.
J.Biol.Chem., 299, 2023
8SSE
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BU of 8sse by Molmil
Methionine synthase, C-terminal fragment, Cobalamin and Reactivation Domains from Thermus thermophilus HB8
分子名称: COBALAMIN, Methionine synthase
著者Yamada, K, Mendoza, J, Koutmos, M.
登録日2023-05-08
公開日2023-10-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structure of full-length cobalamin-dependent methionine synthase and cofactor loading captured in crystallo.
Nat Commun, 14, 2023
3IV9
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BU of 3iv9 by Molmil
Structure of the B12-dependent Methionine Synthase (MetH) C-teminal half in a "His-On" conformation
分子名称: COBALAMIN, Methionine synthase
著者Pattridge, K.A, Koutmos, M, Smith, J.L.
登録日2009-08-31
公開日2009-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Insights into the reactivation of cobalamin-dependent methionine synthase.
Proc.Natl.Acad.Sci.USA, 106, 2009
8SSF
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BU of 8ssf by Molmil
Minimal protein-only/RNA-free Ribonuclease P from Hydrogenobacter thermophilus
分子名称: RNA-free ribonuclease P, SULFATE ION
著者Mendoza, J, Mallik, L, Wilhelm, C.A, Koutmos, M.
登録日2023-05-08
公開日2023-10-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Bacterial RNA-free RNase P: Structural and functional characterization of multiple oligomeric forms of a minimal protein-only ribonuclease P.
J.Biol.Chem., 299, 2023
8SSC
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BU of 8ssc by Molmil
Full-Length Methionine synthase from Thermus thermophilus HB8
分子名称: Methionine synthase, POTASSIUM ION, SULFATE ION
著者Yamada, K, Mendoza, J, Koutmos, M.
登録日2023-05-08
公開日2023-10-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure of full-length cobalamin-dependent methionine synthase and cofactor loading captured in crystallo.
Nat Commun, 14, 2023
8SSD
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BU of 8ssd by Molmil
Methionine synthase, C-terminal fragment, Cobalamin and Reactivation Domains from Thermus thermophilus HB8
分子名称: Methionine synthase
著者Yamada, K, Mendoza, J, Koutmos, M.
登録日2023-05-08
公開日2023-10-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of full-length cobalamin-dependent methionine synthase and cofactor loading captured in crystallo.
Nat Commun, 14, 2023
3IVA
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BU of 3iva by Molmil
Structure of the B12-dependent Methionine Synthase (MetH) C-teminal half with AdoHcy bound
分子名称: COBALAMIN, Methionine synthase, NITRATE ION, ...
著者Pattridge, K.A, Koutmos, M, Smith, J.L.
登録日2009-08-31
公開日2009-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Insights into the reactivation of cobalamin-dependent methionine synthase.
Proc.Natl.Acad.Sci.USA, 106, 2009
6WH5
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BU of 6wh5 by Molmil
Mycobacterium tuberculosis pduO-type ATP:cobalamin adenosyltransferase bound to cob(II)alamin and PPPi
分子名称: COBALAMIN, Corrinoid adenosyltransferase, MAGNESIUM ION, ...
著者Mascarenhas, R.N, Ruetz, M, Koutmos, M, Banerjee, R.
登録日2020-04-07
公開日2021-01-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.866 Å)
主引用文献Mobile loop dynamics in adenosyltransferase control binding and reactivity of coenzyme B 12 .
Proc.Natl.Acad.Sci.USA, 117, 2020
5DIZ
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BU of 5diz by Molmil
Crystal Structure of nuclear proteinaceous RNase P 2 (PRORP2) from A. thaliana
分子名称: Proteinaceous RNase P 2, ZINC ION
著者Karasik, A, Shanmuganathan, A, Howard, M.J, Fierke, C.A, Koutmos, M.
登録日2015-09-01
公開日2015-12-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Nuclear Protein-Only Ribonuclease P2 Structure and Biochemical Characterization Provide Insight into the Conserved Properties of tRNA 5' End Processing Enzymes.
J.Mol.Biol., 428, 2016
6WGU
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BU of 6wgu by Molmil
Mycobacterium tuberculosis pduO-type ATP:cobalamin adenosyltransferase
分子名称: Corrinoid adenosyltransferase, SULFATE ION
著者Mascarenhas, R.N, Ruetz, M, Koutmos, M, Banerjee, R.
登録日2020-04-06
公開日2021-01-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Mobile loop dynamics in adenosyltransferase control binding and reactivity of coenzyme B 12 .
Proc.Natl.Acad.Sci.USA, 117, 2020
6WGV
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BU of 6wgv by Molmil
Mycobacterium tuberculosis pduO-type ATP:cobalamin adenosyltransferase bound to adenosylcobalamin and PPPi
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, Corrinoid adenosyltransferase, ...
著者Mascarenhas, R.N, Ruetz, M, Koutmos, M, Banerjee, R.
登録日2020-04-06
公開日2021-01-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.151 Å)
主引用文献Mobile loop dynamics in adenosyltransferase control binding and reactivity of coenzyme B 12 .
Proc.Natl.Acad.Sci.USA, 117, 2020
6WGS
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BU of 6wgs by Molmil
Mycobacterium tuberculosis pduO-type ATP:cobalamin adenosyltransferase bound to adenosylcobalamin
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, Corrinoid adenosyltransferase
著者Mascarenhas, R.N, Ruetz, M, Koutmos, M, Banerjee, R.
登録日2020-04-06
公開日2021-01-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mobile loop dynamics in adenosyltransferase control binding and reactivity of coenzyme B 12 .
Proc.Natl.Acad.Sci.USA, 117, 2020
5CV0
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BU of 5cv0 by Molmil
Crystal structure of N-terminal truncated human B12-chaperone CblD (108-296)
分子名称: Methylmalonic aciduria and homocystinuria type D protein, mitochondrial
著者Yamada, K, Gherasim, C, Banerjee, R, Koutmos, M.
登録日2015-07-24
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of Human B12 Trafficking Protein CblD Reveals Molecular Mimicry and Identifies a New Subfamily of Nitro-FMN Reductases.
J.Biol.Chem., 290, 2015
5CUZ
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BU of 5cuz by Molmil
Crystal structure of SeMet-substituted N-terminal truncated human B12-chaperone CblD (108-296)
分子名称: Methylmalonic aciduria and homocystinuria type D protein, mitochondrial
著者Yamada, K, Gherasim, C, Banerjee, R, Koutmos, M.
登録日2015-07-25
公開日2015-09-23
最終更新日2015-12-16
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structure of Human B12 Trafficking Protein CblD Reveals Molecular Mimicry and Identifies a New Subfamily of Nitro-FMN Reductases.
J.Biol.Chem., 290, 2015
5UOS
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BU of 5uos by Molmil
Crystal Structure of CblC (MMACHC) (1-238), a human B12 processing enzyme, complexed with an Antivitamin B12
分子名称: 1-ethynyl-2,4-difluorobenzene, 2-PHENYLAMINO-ETHANESULFONIC ACID, COBALAMIN, ...
著者Shanmuganathan, A, Karasik, A, Ruetz, M, Banerjee, R, Krautler, B, Koutmos, M.
登録日2017-02-01
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Antivitamin B12 Inhibition of the Human B12 -Processing Enzyme CblC: Crystal Structure of an Inactive Ternary Complex with Glutathione as the Cosubstrate.
Angew. Chem. Int. Ed. Engl., 56, 2017

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件を2024-07-17に公開中

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